BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00016865
         (553 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   157   1e-36
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   157   1e-36
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   154   2e-35
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   153   2e-35
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   152   4e-35
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   152   4e-35
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   152   4e-35
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   145   5e-33
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   145   6e-33
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   142   7e-32
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   140   3e-31
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   139   4e-31
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   139   4e-31
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   137   2e-30
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   135   9e-30
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...   134   2e-29
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   132   6e-29
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   130   2e-28
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   127   1e-27

>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
           gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
           putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M+  TEGAT+S+EAVRF F T EEVRKHSF++ T+A+LL  +  P               
Sbjct: 1   MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 288 RAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
           R PCKSCG     CPGHCGH+ L+ P+YNPLLFN L+ +LQR CFFC+HFRA +++VE C
Sbjct: 61  RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 465 ISQLELIMKGNVIGAKNLDS 524
           +SQL+LI  G+++GAK LDS
Sbjct: 121 VSQLKLIGNGDIVGAKRLDS 140


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
           gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
           putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M+  TEGAT+S+EAVRF F T EEVRKHSF++ T+A+LL  +  P               
Sbjct: 1   MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 288 RAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
           R PCKSCG     CPGHCGH+ L+ P+YNPLLFN L+ +LQR CFFC+HFRA +++VE C
Sbjct: 61  RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 465 ISQLELIMKGNVIGAKNLDS 524
           +SQL+LI  G+++GAK LDS
Sbjct: 121 VSQLKLIGNGDIVGAKRLDS 140


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  154 bits (389), Expect = 1e-35
 Identities = 77/141 (54%), Positives = 97/141 (68%), Gaps = 2/141 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M++  EG TE +EAV+F FFTDEEVRK+SF + TS  +L  V  P               
Sbjct: 1   MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 288 RAPCKSCGQ-SGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
             PC+SCGQ S  CPGHCGH+ L+  VYNPLLFN+L+ +LQ+TCFFCHHF+   S V+  
Sbjct: 61  NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 465 ISQLELIMKGNVIGAKNLDSL 527
           +SQLELI KG+V+GAKNLDS+
Sbjct: 121 VSQLELISKGDVVGAKNLDSI 141


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           lycopersicum]
          Length = 1677

 Score =  154 bits (388), Expect = 2e-35
 Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = +3

Query: 126 EGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGV-VPAXXXXXXXXXXXXXXRAPCK 302
           +GA+E++EAV F F TDEEVR+HS V+ TS +LL G+ +P                + CK
Sbjct: 3   QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 303 SCGQSGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLEL 482
            C QS  C GHCGH+ L+ PVYNPLLFNML+ +LQRTCF+C HFRA R++VE C+S+LEL
Sbjct: 63  FCSQSN-CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELEL 121

Query: 483 IMKGNVIGAKNLDSL 527
           I KG+V+GAK +D+L
Sbjct: 122 IAKGDVVGAKMIDAL 136


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  153 bits (387), Expect = 2e-35
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
 Frame = +3

Query: 123 TEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXXRAPC 299
           ++GATESI+++ F F TDEEVRKHSFV+ T+  LL  V  P               R  C
Sbjct: 8   SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 300 KSCGQ-SGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQL 476
           K+CGQ S  CPGHCGH+ L+ PVYNPLLFN L+ +LQRTCF C HFR  R +VE CI QL
Sbjct: 68  KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 477 ELIMKGNVIGAKNLDSL 527
           ELI+KG+++GAK L+S+
Sbjct: 128 ELIVKGDIVGAKRLESV 144


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           tuberosum]
          Length = 1675

 Score =  152 bits (385), Expect = 4e-35
 Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = +3

Query: 126 EGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGV-VPAXXXXXXXXXXXXXXRAPCK 302
           +GA+E++EAV F F TDEEVR+HS V+ TS +LL G+ +P                + CK
Sbjct: 3   QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 303 SCGQSGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLEL 482
            C QS  C GHCGH+ L+ PVYNPLLFNML+ +LQRTCF+C HFRA R++VE C+S+LEL
Sbjct: 63  FCCQSN-CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELEL 121

Query: 483 IMKGNVIGAKNLDSL 527
           I KG+V+GAK +D+L
Sbjct: 122 IAKGDVVGAKMIDAL 136


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
           gi|557103957|gb|ESQ44311.1| hypothetical protein
           EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  152 bits (385), Expect = 4e-35
 Identities = 74/135 (54%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
 Frame = +3

Query: 126 EGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXXRAPCK 302
           EGA++ +E+VRF F T+E+VRKHS ++ T+  LL  V  P               R  CK
Sbjct: 8   EGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDRTSCK 67

Query: 303 SCGQ-SGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLE 479
           SCGQ S  CPGHCGH+ L+ P+Y+PLLFN+LY  LQRTCFFCHHF A ++ VE C+SQL+
Sbjct: 68  SCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCVSQLK 127

Query: 480 LIMKGNVIGAKNLDS 524
           LIMKGN++ AK LDS
Sbjct: 128 LIMKGNLVAAKQLDS 142


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  152 bits (385), Expect = 4e-35
 Identities = 76/137 (55%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
 Frame = +3

Query: 123 TEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXXRAPC 299
           T G TE +EAV+F FFTDEEVRK+SF + TS  +L  V  P                 PC
Sbjct: 54  TSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPC 113

Query: 300 KSCGQ-SGRCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQL 476
           +SCGQ S  CPGHCGH+ L+  VYNPLLFN+L+ +LQ+TCFFCHHF+   S V+  +SQL
Sbjct: 114 QSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQL 173

Query: 477 ELIMKGNVIGAKNLDSL 527
           ELI KG+V+GAKNLDS+
Sbjct: 174 ELISKGDVVGAKNLDSI 190


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
           gi|462398594|gb|EMJ04262.1| hypothetical protein
           PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  145 bits (367), Expect = 5e-33
 Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSA----DLLHGVVPAXXXXXXXXXXX 278
           M+  ++  T +++A+RFGFFTDEEVRKHSFV+ TS     D  H  V             
Sbjct: 1   MALLSQVPTTAVDAIRFGFFTDEEVRKHSFVKVTSPILFDDSTHTPVNGGLYDKAMGPLG 60

Query: 279 XXXRAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKV 455
                 C++CGQ+   C GHCGH+ L+LP YNPLLFN+L+ +LQRTCFFC+HFR  R  V
Sbjct: 61  DERGQLCQTCGQTAYTCSGHCGHIDLVLPAYNPLLFNILHKLLQRTCFFCYHFRTSRQHV 120

Query: 456 ENCISQLELIMKGNVIGAKNLDS 524
           E  +SQL+LIMKG+V+GAK L+S
Sbjct: 121 EKHVSQLKLIMKGDVLGAKRLES 143


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
           gi|482559195|gb|EOA23386.1| hypothetical protein
           CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  145 bits (366), Expect = 6e-33
 Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
 Frame = +3

Query: 123 TEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXXRAPC 299
           TEGA++ +E+VRF F T+++VRKHSF++ TS  LL  V  P               +  C
Sbjct: 7   TEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDKEAC 66

Query: 300 KSCGQSGR-CPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQL 476
           KSCGQ    CPGHCGH+ L+ P+Y+PLLF++LY  LQRTCFFCHHF A  + V+ C+SQL
Sbjct: 67  KSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCVSQL 126

Query: 477 ELIMKGNVIGAKNLD 521
           +LIMKG+++ AK L+
Sbjct: 127 KLIMKGDIVSAKQLE 141


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score =  142 bits (357), Expect = 7e-32
 Identities = 74/146 (50%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSA---DLLHGVVPAXXXXXXXXXXXX 281
           M+  TEGAT S++AV F F TDEE+ K S V+ T+    D LH   P             
Sbjct: 1   MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHS--PVAGGLYDPALGPF 58

Query: 282 XXRAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVE 458
             ++PC+SCGQ+   CPGH GH+ L+ PVYNPL+F+ML  VL+RTCF CHHF+A R++VE
Sbjct: 59  HEKSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVE 118

Query: 459 NCISQLELIMKGNVIGAKNLDSLYLE 536
              +QLELIMKGN+  AKNLD++ L+
Sbjct: 119 LRANQLELIMKGNIAKAKNLDAINLD 144


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
           sinensis]
          Length = 1715

 Score =  140 bits (352), Expect = 3e-31
 Identities = 71/139 (51%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M+  TE  TES++AV F F TDEEVRK SF++     LL  V  P               
Sbjct: 1   MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 288 RAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
            + CK+CGQ    CPGH GH+ L++PVYNPLLFN+LY +L+R CFFCHHF+A R +VE C
Sbjct: 61  TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 465 ISQLELIMKGNVIGAKNLD 521
           + +LELI+KG++I AK+LD
Sbjct: 121 VRKLELIIKGDIIAAKSLD 139


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
           gi|557523327|gb|ESR34694.1| hypothetical protein
           CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  139 bits (351), Expect = 4e-31
 Identities = 71/139 (51%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M+  TE  TES++AV F F TDEEVRK SF++ T   LL  V  P               
Sbjct: 1   MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 288 RAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
            + CK+CGQ    CPGH GH+ L++ VYNPLLFN+LY +L+R CFFCHHF+A R +VE C
Sbjct: 61  TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 465 ISQLELIMKGNVIGAKNLD 521
           + +LELI+KG++I AK+LD
Sbjct: 121 VRKLELIIKGDIIAAKSLD 139


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1660

 Score =  139 bits (351), Expect = 4e-31
 Identities = 73/146 (50%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSA---DLLHGVVPAXXXXXXXXXXXX 281
           M+  TEGAT S++AV F F TDEE+ K S V+ T+    D LH   P             
Sbjct: 1   MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHS--PVAGGLYDPALGPF 58

Query: 282 XXRAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVE 458
             ++PC+SCGQ+   CPGH GH+ L+ P YNPL+F+ML  VL+RTCF CHHF+A R +VE
Sbjct: 59  HEKSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVE 118

Query: 459 NCISQLELIMKGNVIGAKNLDSLYLE 536
              +QLELIMKGN+  AKNLD + L+
Sbjct: 119 LRANQLELIMKGNIAKAKNLDEINLD 144


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1651

 Score =  137 bits (345), Expect = 2e-30
 Identities = 71/141 (50%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M   TEGAT S+EAV F F TD+E+R+ S V+ TS  L+  ++ P               
Sbjct: 1   MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 288 RAPCKSCGQSGR-CPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
           ++ CKSCGQ+ + CPGH GH+ L+ PVYNPL+FN+L  +LQRTCF CHHFRA   +V+  
Sbjct: 61  KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 465 ISQLELIMKGNVIGAKNLDSL 527
            SQLELIMKG++I AK L+S+
Sbjct: 121 TSQLELIMKGDIIRAKRLESI 141


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
           lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
           ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  135 bits (339), Expect = 9e-30
 Identities = 65/134 (48%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
 Frame = +3

Query: 129 GATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGV-VPAXXXXXXXXXXXXXXRAPCKS 305
           GA++ +E+VRF F T+++VRKHSF++ TS  LL  V  P               +  C +
Sbjct: 22  GASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKACDT 81

Query: 306 CGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLEL 482
           CGQ    CPGHCGH+ L+ P+Y+PLLFN+LY  LQRTCF CHHF A    VE  +SQL+L
Sbjct: 82  CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLKL 141

Query: 483 IMKGNVIGAKNLDS 524
           I+KG+++ AK L+S
Sbjct: 142 IIKGDIVSAKQLES 155


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
           gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
           190K chain-like protein [Arabidopsis thaliana]
           gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
           [Arabidopsis thaliana]
          Length = 1670

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/135 (48%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
 Frame = +3

Query: 129 GATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV--PAXXXXXXXXXXXXXXRAPCK 302
           GA++ +E+VRF F T+++VRKHSF++ TS  +LH  V  P               +  C 
Sbjct: 22  GASQVVESVRFSFMTEQDVRKHSFLKVTSP-ILHDNVGNPFPGGLYDLKLGPKDDKQACN 80

Query: 303 SCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLE 479
           SCGQ    CPGHCGH+ L+ P+Y+PLLFN+L+  LQR CFFCHHF A    VE  +SQL+
Sbjct: 81  SCGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCHHFMAKPEDVERAVSQLK 140

Query: 480 LIMKGNVIGAKNLDS 524
           LI+KG+++ AK L+S
Sbjct: 141 LIIKGDIVSAKQLES 155


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
           gi|561018822|gb|ESW17626.1| hypothetical protein
           PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  132 bits (332), Expect = 6e-29
 Identities = 67/137 (48%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
 Frame = +3

Query: 123 TEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXXRAPC 299
           TEG T S++AV F F T +E+ + S V+ T+  LL+ ++ P               ++ C
Sbjct: 5   TEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDDKSLC 64

Query: 300 KSCGQSGR-CPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQL 476
           KSCGQ  + CPGH GH+ L+ PVYNPL+FN+L ++LQRTCF CHHF A R +VE   SQ 
Sbjct: 65  KSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMRTSQF 124

Query: 477 ELIMKGNVIGAKNLDSL 527
           ELIMKG++I AK+LDS+
Sbjct: 125 ELIMKGDIIRAKSLDSI 141


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
 Frame = +3

Query: 111 MSYRTEGATESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGVV-PAXXXXXXXXXXXXXX 287
           M+  TEGA+ES++ V F F T+EEVRK S V+ T+  LL G+  P               
Sbjct: 1   MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 288 RAPCKSCGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENC 464
              CKSCGQ    CPGHCGH+ L+ PVYNPLLF +L+  L+ TCF CHHFRA  S VENC
Sbjct: 61  TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 465 ISQLELIMKGNVIGAKNLDSLYLEGHS 545
            + LELI+ G +  AK L+  ++   S
Sbjct: 121 KTLLELILDGEIAKAKELEEEWMNSKS 147


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like
           [Fragaria vesca subsp. vesca]
          Length = 1673

 Score =  127 bits (320), Expect = 1e-27
 Identities = 67/141 (47%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
 Frame = +3

Query: 135 TESIEAVRFGFFTDEEVRKHSFVQSTSADLLHGV---VPAXXXXXXXXXXXXXXRAPCKS 305
           TESI AV F FFTDEE  K S ++ T  DL+  +   V                   C++
Sbjct: 18  TESIRAVSFSFFTDEEASKQSVIKITKPDLVDELGTPVQGGLYDPAMGPLDDRSHTCCRT 77

Query: 306 CGQSG-RCPGHCGHVALILPVYNPLLFNMLYAVLQRTCFFCHHFRAIRSKVENCISQLEL 482
           CGQ+   C GH GH+ ++LPVYNPLLFN LY +LQRTCF C  FR  R +V+ C+SQLEL
Sbjct: 78  CGQNAYNCQGHFGHIDIVLPVYNPLLFNHLYKLLQRTCFNCCCFRTSREQVQKCVSQLEL 137

Query: 483 IMKGNVIGAKNLDSLYLEGHS 545
           +M+G+V+ AK LDS     HS
Sbjct: 138 VMRGDVVAAKRLDSDSPNHHS 158