BLASTX nr result
ID: Paeonia23_contig00016562
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00016562
(777 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 286 6e-75
emb|CBI33509.3| unnamed protein product [Vitis vinifera] 282 8e-74
ref|XP_006482097.1| PREDICTED: DNA repair protein complementing ... 282 1e-73
ref|XP_006482096.1| PREDICTED: DNA repair protein complementing ... 282 1e-73
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr... 282 1e-73
ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative iso... 274 3e-71
ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative iso... 272 1e-70
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus... 253 5e-65
ref|XP_006364632.1| PREDICTED: DNA repair protein complementing ... 248 1e-63
ref|XP_006364631.1| PREDICTED: DNA repair protein complementing ... 248 1e-63
ref|XP_004250530.1| PREDICTED: DNA repair protein complementing ... 248 2e-63
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 247 3e-63
ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prun... 240 5e-61
gb|EYU30903.1| hypothetical protein MIMGU_mgv1a002008mg [Mimulus... 232 1e-58
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ... 230 4e-58
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri... 230 5e-58
ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis ... 229 8e-58
ref|XP_006400201.1| hypothetical protein EUTSA_v10012651mg [Eutr... 226 5e-57
ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana] ... 225 1e-56
ref|XP_006287057.1| hypothetical protein CARUB_v10000205mg [Caps... 220 4e-55
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 286 bits (732), Expect = 6e-75
Identities = 159/264 (60%), Positives = 189/264 (71%), Gaps = 23/264 (8%)
Frame = -3
Query: 766 DAGTTVTLNTLRDEGCSRDVTGNTPGRKE---------------EMDESDWEDGSIPNVE 632
D G VT N L EGC R G + KE +++ESDWE+GSIP ++
Sbjct: 238 DTGGRVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNSGEDINESDWEEGSIPTLD 297
Query: 631 STKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDA 452
S N N K +TIELSG DS+++KP+RRASAEDKELAELVHKVHLLCLLARGRL+D+
Sbjct: 298 SVDNHQNAGIKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLIDS 357
Query: 451 ACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSAL 275
ACNDPL+QASLLSLLP LK S + +L+A A +V WFH+NF +RSPS+ R HS+L
Sbjct: 358 ACNDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSL 417
Query: 274 AFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESV------SGGG 113
AFALEA EGTPEE+ AL VAL RAL+LTTRFVSILDVA LKP DKSES + GG
Sbjct: 418 AFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQNANRASGG 477
Query: 112 LFQSSTLMVARSNQV-STPIKSSS 44
+F +STLMVAR NQV S+P+KSSS
Sbjct: 478 IFDNSTLMVARKNQVSSSPVKSSS 501
>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
Length = 866
Score = 282 bits (722), Expect = 8e-74
Identities = 156/263 (59%), Positives = 186/263 (70%), Gaps = 22/263 (8%)
Frame = -3
Query: 766 DAGTTVTLNTLRDEGCSRDVTGNTPGRKE---------------EMDESDWEDGSIPNVE 632
D G VT N L EGC R G + KE +++ESDWE+GSIP ++
Sbjct: 78 DTGGRVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNSGEDINESDWEEGSIPTLD 137
Query: 631 STKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDA 452
S N N K +TIELSG DS+++KP+RRASAEDKELAELVHKVHLLCLLARGRL+D+
Sbjct: 138 SVDNHQNAGIKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLIDS 197
Query: 451 ACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSAL 275
ACNDPL+QASLLSLLP LK S + +L+A A +V WFH+NF +RSPS+ R HS+L
Sbjct: 198 ACNDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSL 257
Query: 274 AFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESV------SGGG 113
AFALEA EGTPEE+ AL VAL RAL+LTTRFVSILDVA LKP DKSES + GG
Sbjct: 258 AFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQNANRASGG 317
Query: 112 LFQSSTLMVARSNQVSTPIKSSS 44
+F +STLMVAR NQVS+ K+ S
Sbjct: 318 IFDNSTLMVARKNQVSSSPKNCS 340
>ref|XP_006482097.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Citrus sinensis]
Length = 954
Score = 282 bits (721), Expect = 1e-73
Identities = 164/278 (58%), Positives = 197/278 (70%), Gaps = 21/278 (7%)
Frame = -3
Query: 772 RQDAGTTVTLNTLRDEGCSRDVTGNT-----PGRK--------EEMDESDWEDGSIPNVE 632
+Q+ VT + + GCSRD GNT GR EEM +SDWEDGSIP
Sbjct: 60 KQEVDKRVTWSDVDAHGCSRDAMGNTLRELDEGRLQDNVLDGGEEMYDSDWEDGSIPVAC 119
Query: 631 STKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDA 452
S +N KG+TIE + DS +KPVRRASAEDKELAELVHKVHLLCLLARGRL+D+
Sbjct: 120 SKENHPESDIKGVTIEFDAA-DSVTKKPVRRASAEDKELAELVHKVHLLCLLARGRLIDS 178
Query: 451 ACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSAL 275
C+DPLIQASLLSLLP+Y LK S VSKL+A AL PIVSWFH+NF +RS + RS HSAL
Sbjct: 179 VCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSAL 238
Query: 274 AFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS------GGG 113
A ALE+REGTPEEI AL VAL RAL LTTRFVSILDVASLKP+ DK+ S + GGG
Sbjct: 239 AHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGG 298
Query: 112 LFQSSTLMVARSNQV-STPIKSSSYNENDYIYETPPRG 2
+F + TLMVA+ +V ++P+KS S ++ + + ET +G
Sbjct: 299 IFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKG 336
>ref|XP_006482096.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Citrus sinensis]
Length = 974
Score = 282 bits (721), Expect = 1e-73
Identities = 164/278 (58%), Positives = 197/278 (70%), Gaps = 21/278 (7%)
Frame = -3
Query: 772 RQDAGTTVTLNTLRDEGCSRDVTGNT-----PGRK--------EEMDESDWEDGSIPNVE 632
+Q+ VT + + GCSRD GNT GR EEM +SDWEDGSIP
Sbjct: 80 KQEVDKRVTWSDVDAHGCSRDAMGNTLRELDEGRLQDNVLDGGEEMYDSDWEDGSIPVAC 139
Query: 631 STKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDA 452
S +N KG+TIE + DS +KPVRRASAEDKELAELVHKVHLLCLLARGRL+D+
Sbjct: 140 SKENHPESDIKGVTIEFDAA-DSVTKKPVRRASAEDKELAELVHKVHLLCLLARGRLIDS 198
Query: 451 ACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSAL 275
C+DPLIQASLLSLLP+Y LK S VSKL+A AL PIVSWFH+NF +RS + RS HSAL
Sbjct: 199 VCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSAL 258
Query: 274 AFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS------GGG 113
A ALE+REGTPEEI AL VAL RAL LTTRFVSILDVASLKP+ DK+ S + GGG
Sbjct: 259 AHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGG 318
Query: 112 LFQSSTLMVARSNQV-STPIKSSSYNENDYIYETPPRG 2
+F + TLMVA+ +V ++P+KS S ++ + + ET +G
Sbjct: 319 IFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKG 356
>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
gi|557532630|gb|ESR43813.1| hypothetical protein
CICLE_v10010990mg [Citrus clementina]
Length = 974
Score = 282 bits (721), Expect = 1e-73
Identities = 164/278 (58%), Positives = 197/278 (70%), Gaps = 21/278 (7%)
Frame = -3
Query: 772 RQDAGTTVTLNTLRDEGCSRDVTGNT-----PGRK--------EEMDESDWEDGSIPNVE 632
+Q+ VT + + GCSRD GNT GR EEM +SDWEDGSIP
Sbjct: 80 KQEVDKRVTWSDVDAHGCSRDAMGNTLREVDEGRLQDNVLDGGEEMYDSDWEDGSIPVAC 139
Query: 631 STKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDA 452
S +N KG+TIE + DS +KPVRRASAEDKELAELVHKVHLLCLLARGRL+D+
Sbjct: 140 SKENHPESDIKGVTIEFDAA-DSVTKKPVRRASAEDKELAELVHKVHLLCLLARGRLIDS 198
Query: 451 ACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSAL 275
C+DPLIQASLLSLLP+Y LK S VSKL+A AL PIVSWFH+NF +RS + RS HSAL
Sbjct: 199 VCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHDNFHVRSSVSTRRSFHSAL 258
Query: 274 AFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS------GGG 113
A ALE+REGTPEEI AL VAL RAL LTTRFVSILDVASLKP+ DK+ S + GGG
Sbjct: 259 AHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQDSSRVGGG 318
Query: 112 LFQSSTLMVARSNQV-STPIKSSSYNENDYIYETPPRG 2
+F + TLMVA+ +V ++P+KS S ++ + + ET +G
Sbjct: 319 IFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKG 356
>ref|XP_007032988.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma
cacao] gi|508712017|gb|EOY03914.1| DNA repair protein
xp-C / rad4, putative isoform 1 [Theobroma cacao]
Length = 974
Score = 274 bits (700), Expect = 3e-71
Identities = 155/272 (56%), Positives = 184/272 (67%), Gaps = 23/272 (8%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVTGNTP-------------GRKEEMDESDWEDGSIPNV 635
+ Q T + N EGCSR+ G++ E+M++SDWEDGSIP +
Sbjct: 60 NEQVVHTMIVQNASMAEGCSRNAVGSSQLEVDVGSYVDNLFDDSEDMNDSDWEDGSIPKL 119
Query: 634 ESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVD 455
+ NS KGLTIE SA RKPVRRASAEDKE+AELVHKVHLLCLLARGRL+D
Sbjct: 120 DPVDNSPKERMKGLTIEFDEPSGSAGRKPVRRASAEDKEIAELVHKVHLLCLLARGRLID 179
Query: 454 AACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSA 278
AC+DPLIQASLLSL+PT+ K S VS +++ AL P+V+WFHNNF +RS RS H+A
Sbjct: 180 NACDDPLIQASLLSLVPTHLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTA 239
Query: 277 LAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS------GG 116
LAFALE REGTPEEI AL VAL RAL T RFVSILDVASLKP+ DK E S GG
Sbjct: 240 LAFALETREGTPEEIAALSVALFRALKFTARFVSILDVASLKPEADKCEPSSQEANRVGG 299
Query: 115 GLFQSSTLMVARSNQVST---PIKSSSYNEND 29
G+F +STLMVA +VS+ P+KS S +E D
Sbjct: 300 GIFSTSTLMVANPKEVSSSSYPVKSFSCSEKD 331
>ref|XP_007032989.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma
cacao] gi|508712018|gb|EOY03915.1| DNA repair protein
xp-C / rad4, putative isoform 2 [Theobroma cacao]
Length = 908
Score = 272 bits (695), Expect = 1e-70
Identities = 153/264 (57%), Positives = 181/264 (68%), Gaps = 23/264 (8%)
Frame = -3
Query: 751 VTLNTLRDEGCSRDVTGNTP-------------GRKEEMDESDWEDGSIPNVESTKNSLN 611
+ N EGCSR+ G++ E+M++SDWEDGSIP ++ NS
Sbjct: 2 IVQNASMAEGCSRNAVGSSQLEVDVGSYVDNLFDDSEDMNDSDWEDGSIPKLDPVDNSPK 61
Query: 610 YLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPLI 431
KGLTIE SA RKPVRRASAEDKE+AELVHKVHLLCLLARGRL+D AC+DPLI
Sbjct: 62 ERMKGLTIEFDEPSGSAGRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLI 121
Query: 430 QASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEAR 254
QASLLSL+PT+ K S VS +++ AL P+V+WFHNNF +RS RS H+ALAFALE R
Sbjct: 122 QASLLSLVPTHLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETR 181
Query: 253 EGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS------GGGLFQSSTL 92
EGTPEEI AL VAL RAL T RFVSILDVASLKP+ DK E S GGG+F +STL
Sbjct: 182 EGTPEEIAALSVALFRALKFTARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTL 241
Query: 91 MVARSNQVST---PIKSSSYNEND 29
MVA +VS+ P+KS S +E D
Sbjct: 242 MVANPKEVSSSSYPVKSFSCSEKD 265
>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
Length = 962
Score = 253 bits (646), Expect = 5e-65
Identities = 150/275 (54%), Positives = 181/275 (65%), Gaps = 20/275 (7%)
Frame = -3
Query: 769 QDAGTTVTLNTLRDEGCSRDVTGNT---------------PGRKEEMDESDWEDGSIPNV 635
QD + V TL GCS D +T +EEM++SDWEDGSIPN
Sbjct: 67 QDVDSRVKSVTLEAGGCSTDAARDTLREEKVDGGTLQDPLSDSREEMNDSDWEDGSIPNS 126
Query: 634 ESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVD 455
+ T N + +TIE +PD KRKPV +A+AEDKELAE+VHKVHLLCLL RGRL+D
Sbjct: 127 DFTGN------QQVTIEFDETPDPVKRKPVHQATAEDKELAEIVHKVHLLCLLGRGRLID 180
Query: 454 AACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSA 278
AC+DPL QA+LLSLLP + L S ++KL+A+ L P++ WF +NF +RS ++E RS HS
Sbjct: 181 RACDDPLTQAALLSLLPRHLLNISQMTKLTAKNLHPLIHWFQDNFHVRSSTDEKRSIHSN 240
Query: 277 LAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVS---GGGLF 107
LAFALE EGT EEI AL VAL RAL L TRFVSILDVASLKPD DKS S GG +F
Sbjct: 241 LAFALETHEGTSEEIAALSVALFRALGLITRFVSILDVASLKPDGDKSAYFSQDAGGFIF 300
Query: 106 QSSTLMVARSNQV-STPIKSSSYNENDYIYETPPR 5
+ST MVA+ N+ S+P KS S NE D ET R
Sbjct: 301 CTSTPMVAKKNEASSSPSKSFSPNEKDSACETSHR 335
>ref|XP_006364632.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Solanum tuberosum]
Length = 903
Score = 248 bits (634), Expect = 1e-63
Identities = 139/272 (51%), Positives = 183/272 (67%), Gaps = 23/272 (8%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVTGNTP---------------GRKEEMDESDWEDGSIP 641
++Q GTTV TL + C+ DV N P R++E+D DWEDG +
Sbjct: 65 EKQLTGTTVVRTTLDAKCCTTDVLQNVPLEVENGSTDVQCQSIEREDELDGIDWEDGPVD 124
Query: 640 NVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRL 461
++S N G+T+E +PD +K+K VRRA+AE+KELAELVHKV+LLCLLARGRL
Sbjct: 125 TLKSESNVKEDTINGVTVEFDATPDPSKQKTVRRATAEEKELAELVHKVNLLCLLARGRL 184
Query: 460 VDAACNDPLIQASLLSLLPTYCLK-ASVSKLSAEALDPIVSWFHNNFSIRSPSNENRSPH 284
VD+ACNDPLIQASLLSLLP + LK KL+A+AL P+V+W H++F +R ++ + H
Sbjct: 185 VDSACNDPLIQASLLSLLPAHLLKLTDAPKLTAKALAPLVNWCHSHFRVRGANDTEKPFH 244
Query: 283 SALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKS------ESVS 122
SALA LE++EGTPEE+ AL VAL RAL+LTTRFVSILDVASLKP+++KS S +
Sbjct: 245 SALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKSYPSGKGPSRA 304
Query: 121 GGGLFQSSTLMVARSN-QVSTPIKSSSYNEND 29
G G+F SSTLMV +P KS +Y +++
Sbjct: 305 GSGIFSSSTLMVVGPKCSPLSPAKSMAYGKHN 336
>ref|XP_006364631.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Solanum tuberosum]
Length = 928
Score = 248 bits (634), Expect = 1e-63
Identities = 139/272 (51%), Positives = 183/272 (67%), Gaps = 23/272 (8%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVTGNTP---------------GRKEEMDESDWEDGSIP 641
++Q GTTV TL + C+ DV N P R++E+D DWEDG +
Sbjct: 90 EKQLTGTTVVRTTLDAKCCTTDVLQNVPLEVENGSTDVQCQSIEREDELDGIDWEDGPVD 149
Query: 640 NVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRL 461
++S N G+T+E +PD +K+K VRRA+AE+KELAELVHKV+LLCLLARGRL
Sbjct: 150 TLKSESNVKEDTINGVTVEFDATPDPSKQKTVRRATAEEKELAELVHKVNLLCLLARGRL 209
Query: 460 VDAACNDPLIQASLLSLLPTYCLK-ASVSKLSAEALDPIVSWFHNNFSIRSPSNENRSPH 284
VD+ACNDPLIQASLLSLLP + LK KL+A+AL P+V+W H++F +R ++ + H
Sbjct: 210 VDSACNDPLIQASLLSLLPAHLLKLTDAPKLTAKALAPLVNWCHSHFRVRGANDTEKPFH 269
Query: 283 SALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKS------ESVS 122
SALA LE++EGTPEE+ AL VAL RAL+LTTRFVSILDVASLKP+++KS S +
Sbjct: 270 SALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKSYPSGKGPSRA 329
Query: 121 GGGLFQSSTLMVARSN-QVSTPIKSSSYNEND 29
G G+F SSTLMV +P KS +Y +++
Sbjct: 330 GSGIFSSSTLMVVGPKCSPLSPAKSMAYGKHN 361
>ref|XP_004250530.1| PREDICTED: DNA repair protein complementing XP-C cells-like
[Solanum lycopersicum]
Length = 928
Score = 248 bits (633), Expect = 2e-63
Identities = 138/272 (50%), Positives = 182/272 (66%), Gaps = 23/272 (8%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVTGNTPG---------------RKEEMDESDWEDGSIP 641
++Q GTTV TL + C+ DV N P R++E+D DWEDG +
Sbjct: 90 EKQLTGTTVVRTTLDAKCCTTDVLQNVPSEVEHGSTDVQCQSIEREDELDGIDWEDGPVD 149
Query: 640 NVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRL 461
++S N G+T+E PD +K+K VRRA+A++KELAELVHKV+LLCLLARGR
Sbjct: 150 TLKSESNVKEDTINGVTVEFDAPPDPSKQKTVRRATAQEKELAELVHKVNLLCLLARGRF 209
Query: 460 VDAACNDPLIQASLLSLLPTYCLK-ASVSKLSAEALDPIVSWFHNNFSIRSPSNENRSPH 284
VD+ACNDPLIQASLLSLLP + LK KL+A+AL P+V+W H++F +R ++ + H
Sbjct: 210 VDSACNDPLIQASLLSLLPAHLLKLTDAPKLTAKALAPLVNWIHSHFRVRGANDMEKPFH 269
Query: 283 SALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKS------ESVS 122
SALA LE++EGTPEE+ AL VAL RAL+LTTRFVSILDVASLKP+++KS S +
Sbjct: 270 SALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKSYPSGKGPSKA 329
Query: 121 GGGLFQSSTLMVARSN-QVSTPIKSSSYNEND 29
G G+F SSTLMVA +P KS +Y +++
Sbjct: 330 GSGIFSSSTLMVAGPKCSPLSPAKSMAYGKHN 361
>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
gi|550340612|gb|EEE86385.2| hypothetical protein
POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 247 bits (631), Expect = 3e-63
Identities = 137/223 (61%), Positives = 161/223 (72%), Gaps = 7/223 (3%)
Frame = -3
Query: 682 EEMDESDWEDGSIPNVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELV 503
+EMD+ DWEDGS + KN + +TIE S SPDSAKRKP+RRA+AE+K LAELV
Sbjct: 101 QEMDDIDWEDGSSSILGHVKNHPGDGIREVTIEFSESPDSAKRKPIRRATAEEKGLAELV 160
Query: 502 HKVHLLCLLARGRLVDAACNDPLIQASLLSLLPTYCLKA-SVSKLSAEALDPIVSWFHNN 326
HKVHLLCLLARGR++D AC+DPLIQASLLS+LP + KL A+AL P+ WFHNN
Sbjct: 161 HKVHLLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNN 220
Query: 325 FSIRSPSNENRSPHSALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPD 146
F + S +E RS HSAL+ ALE REGT EE+ AL VAL RAL LTTRFVSILDVAS+KPD
Sbjct: 221 FHVASSVSEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPD 280
Query: 145 VDKSESVSGG------GLFQSSTLMVARSNQVSTPIKSSSYNE 35
DK ES+S G G+F +STLMV R +V P KS S NE
Sbjct: 281 ADKYESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSCNE 323
>ref|XP_007217691.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
gi|462413841|gb|EMJ18890.1| hypothetical protein
PRUPE_ppa001034mg [Prunus persica]
Length = 927
Score = 240 bits (612), Expect = 5e-61
Identities = 147/281 (52%), Positives = 180/281 (64%), Gaps = 23/281 (8%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVTGNTPGR---------------KEEMDESDWEDGSIP 641
D +D + V N+L G S+D KEE+D++DWEDG +P
Sbjct: 61 DEEDVDSRVRGNSLETAGGSKDAKKKVSWEEKVDRESFQCSFTDTKEELDDADWEDGPVP 120
Query: 640 NVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRL 461
+ S + +TIEL+ +PDS +RK +RRASAEDKELAELVHKVHLLCLLARGRL
Sbjct: 121 ILNSVGDH------EVTIELNETPDSTRRKRIRRASAEDKELAELVHKVHLLCLLARGRL 174
Query: 460 VDAACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPH 284
+D AC+D LIQA+LLSLLP + L S V+K + + L P+V WF NNF +RS S ++S +
Sbjct: 175 IDRACDDALIQATLLSLLPVHLLHISKVAKPTVKDLRPLVFWFQNNFRVRSTS-VSKSFY 233
Query: 283 SALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSE------SVS 122
SAL FALE EGT EEI AL VAL RAL+LTTRFVSILDVASLKPD DK+E S S
Sbjct: 234 SALTFALETHEGTQEEIAALSVALFRALNLTTRFVSILDVASLKPDADKTEYSSEDASRS 293
Query: 121 GGGLFQSSTLMVARSNQVSTPI-KSSSYNENDYIYETPPRG 2
G+F +ST MVAR VS + KS S NE D + T G
Sbjct: 294 SRGIFSTSTPMVARKQDVSVSLGKSPSCNERDNVCGTSQMG 334
>gb|EYU30903.1| hypothetical protein MIMGU_mgv1a002008mg [Mimulus guttatus]
Length = 727
Score = 232 bits (592), Expect = 1e-58
Identities = 136/255 (53%), Positives = 168/255 (65%), Gaps = 11/255 (4%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRDVT--GNTPGRKEEMDESD--WEDGSIPNVESTKNSLNY 608
++ G T +T E SRD T +P + +++D+ D WE+GSIP + S K+
Sbjct: 9 EKNPVGPTGGNDTADPESYSRDATEYAFSPAKDDDVDDDDCEWENGSIPTLSSMKDFQED 68
Query: 607 LAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPLIQ 428
G+++E S KRKP +RA+AE+K++AE VHK HLLCLL RGRLVD+AC+DPLIQ
Sbjct: 69 SVDGVSVEFDVSNCLTKRKPAKRATAEEKDVAEFVHKAHLLCLLGRGRLVDSACDDPLIQ 128
Query: 427 ASLLSLLPTYCLK-ASVSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEARE 251
ASLLSLLPT LK A L+A L P+VSWFHNNF +RSP H ALA LE RE
Sbjct: 129 ASLLSLLPTSLLKIADSPTLTASNLSPLVSWFHNNFHVRSPIAAETPCHLALASTLETRE 188
Query: 250 GTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVSGGG------LFQSSTLM 89
G+PE + AL VAL RAL+LTTRFVSILDVASLKPD DKSESV+ G +F SSTLM
Sbjct: 189 GSPEAVAALSVALFRALNLTTRFVSILDVASLKPDADKSESVTEVGSKRLKDVFGSSTLM 248
Query: 88 VARSNQVSTPIKSSS 44
VA + S + SS
Sbjct: 249 VAGPSCSSERTEKSS 263
>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Fragaria vesca subsp. vesca]
Length = 919
Score = 230 bits (587), Expect = 4e-58
Identities = 140/280 (50%), Positives = 182/280 (65%), Gaps = 22/280 (7%)
Frame = -3
Query: 775 DRQDAGTTVTLNTLRDEGCSRD----VTGNTPG-----------RKEEMDESDWEDGSIP 641
D++D V N L E CSRD V+ +T G +EE+++SDWEDG +P
Sbjct: 57 DKKDVDARVASNALETEVCSRDALRKVSRDTNGDEESFQCSFMDSREELNDSDWEDGPVP 116
Query: 640 NVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRL 461
NS+ +TIE++ +PDS +RK RRAS EDKE+AELVHK HLLCL+ARGRL
Sbjct: 117 ----ISNSMG--GHEVTIEINETPDSRRRKRSRRASVEDKEVAELVHKAHLLCLIARGRL 170
Query: 460 VDAACNDPLIQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPH 284
+D AC+D LIQASLLSLLP + L+ S V+KL+ + L P+V WF NNF +R+ S RS H
Sbjct: 171 IDRACDDALIQASLLSLLPEHLLRVSKVAKLTVKHLLPLVFWFQNNFRVRTTS-VRRSFH 229
Query: 283 SALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPDVDKSE------SVS 122
AL FALE REGT EEI AL VAL RAL+LTTR VS+L+VASLKP+ DK++ S
Sbjct: 230 LALNFALETREGTQEEIAALSVALFRALNLTTRLVSVLNVASLKPEADKTDWSSEDASRL 289
Query: 121 GGGLFQSSTLMVARSNQVSTPIKSSSYNENDYIYETPPRG 2
G+F ++T MVAR N P+ ++ +E + + ETP G
Sbjct: 290 SKGIFSTATPMVARKN---VPVSPATSSERNSVGETPQIG 326
>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
rad4, putative [Ricinus communis]
Length = 683
Score = 230 bits (586), Expect = 5e-58
Identities = 128/210 (60%), Positives = 152/210 (72%), Gaps = 10/210 (4%)
Frame = -3
Query: 613 NYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPL 434
N L GLTIE S SPDS K+KP+RRA+A++KELAELVHKVHLLCLLARGR++D+AC+DPL
Sbjct: 7 NSLGGGLTIEFSESPDSVKKKPIRRATAQEKELAELVHKVHLLCLLARGRIIDSACDDPL 66
Query: 433 IQASLLSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEA 257
IQASLLSLLP + LK S VSKLSA AL P+VSWFHNNF +RS E R SALAFALE
Sbjct: 67 IQASLLSLLPAHLLKISGVSKLSANALSPLVSWFHNNFHVRSSFGEKRPFQSALAFALET 126
Query: 256 REGTPEEITALFVAL---LRALHLTTRFVSILDVASLKPDVDKSESVSGG------GLFQ 104
EGTPEE ++V+ +R+ + RFVSILDVAS+KPD DK ES + G+F
Sbjct: 127 HEGTPEEERLIYVSARENVRSQQVLMRFVSILDVASIKPDADKCESATQDMSRDYRGVFN 186
Query: 103 SSTLMVARSNQVSTPIKSSSYNENDYIYET 14
+STLMV R +VS K S NE + ET
Sbjct: 187 TSTLMVDRPKEVSMSPKLFSCNEKSNVCET 216
>ref|XP_002871728.1| DNA repair protein Rad4 family [Arabidopsis lyrata subsp. lyrata]
gi|297317565|gb|EFH47987.1| DNA repair protein Rad4
family [Arabidopsis lyrata subsp. lyrata]
Length = 868
Score = 229 bits (584), Expect = 8e-58
Identities = 137/269 (50%), Positives = 180/269 (66%), Gaps = 12/269 (4%)
Frame = -3
Query: 772 RQDAGTTVTLNTLRDEGCSRDVTGNTPGRKEEMDESDWEDGSIPNVESTKNSLNYL-AKG 596
+Q +T N L D C T ++EM++SDWED IP+++ST + N +
Sbjct: 56 KQAVEARLTDNVLEDRECG------TVDDEDEMNDSDWEDCPIPSLDSTVDVTNVDDTRE 109
Query: 595 LTIELSGS-PDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPLIQASL 419
LTIE PD+ K+K RA+AEDKE AELVHKVHLLCLLARGR+VD ACNDPLIQA+L
Sbjct: 110 LTIEFDDDVPDAKKQKIAYRATAEDKERAELVHKVHLLCLLARGRIVDDACNDPLIQAAL 169
Query: 418 LSLLPTYCLKAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEAREGTP 242
LSLLP+Y K S + K+ + + P++ W NFS+R + +S ++LAFALE+R+GT
Sbjct: 170 LSLLPSYLTKVSNLEKVIVKDIAPLLRWVRENFSVRCSPSSEKSFRTSLAFALESRKGTA 229
Query: 241 EEITALFVALLRALHLTTRFVSILDVASLKPDVDKSESVSGG------GLFQSSTLMVAR 80
EE+ AL VALLRAL+LTTRFVSILDVASLKP D+ ES G+F++STLMV +
Sbjct: 230 EELAALAVALLRALNLTTRFVSILDVASLKPGADRDESSGQNRAKMKHGIFRTSTLMVPK 289
Query: 79 SNQVST-PIKSSSYNENDYIYET--PPRG 2
+S+ P KSSS+ +N I++T P RG
Sbjct: 290 QQAISSHPKKSSSHVKNKSIFDTSEPQRG 318
>ref|XP_006400201.1| hypothetical protein EUTSA_v10012651mg [Eutrema salsugineum]
gi|557101291|gb|ESQ41654.1| hypothetical protein
EUTSA_v10012651mg [Eutrema salsugineum]
Length = 868
Score = 226 bits (577), Expect = 5e-57
Identities = 132/254 (51%), Positives = 169/254 (66%), Gaps = 8/254 (3%)
Frame = -3
Query: 751 VTLNTLRDEGCSRDVTGNTPGRKEEMDESDWEDGSIPNVESTKNSLNYLAKGLTIELSGS 572
+T N L D C + + +EM++SDWED IP+V +T ++ + LTIE
Sbjct: 68 LTDNVLEDRECGKRAGCDD----DEMNDSDWEDCPIPSVGNTIDAYIDDTRDLTIEFDDV 123
Query: 571 PDSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPLIQASLLSLLPTYCL 392
PD+ ++K V R +AEDKE AELVHKVHLLCLLARGR+VD ACNDPLIQASLLSLLP+Y
Sbjct: 124 PDTKRQKNVYRPTAEDKERAELVHKVHLLCLLARGRIVDNACNDPLIQASLLSLLPSYLA 183
Query: 391 KAS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEAREGTPEEITALFVA 215
K S + ++ + P++ W NFS+R + +S ++LAFALE+R GT EE+ AL VA
Sbjct: 184 KVSNLENVTVRDIAPLLRWVRGNFSVRCTPSSEKSFRTSLAFALESRRGTSEELGALAVA 243
Query: 214 LLRALHLTTRFVSILDVASLKPDVDKSESVSGG------GLFQSSTLMVARSNQVST-PI 56
L RAL LTTRFVSILDVASLKP DK ES G+F+SSTLMV + +S+ P
Sbjct: 244 LFRALKLTTRFVSILDVASLKPGADKDESSGQNRAKMKHGIFRSSTLMVPKQQVISSYPS 303
Query: 55 KSSSYNENDYIYET 14
KSSS+ EN + ET
Sbjct: 304 KSSSHVENKGLCET 317
>ref|NP_197166.2| DNA repair protein Rad4 [Arabidopsis thaliana]
gi|79327993|ref|NP_001031894.1| DNA repair protein Rad4
[Arabidopsis thaliana] gi|17065358|gb|AAL32833.1|
Unknown protein [Arabidopsis thaliana]
gi|34098839|gb|AAQ56802.1| At5g16630 [Arabidopsis
thaliana] gi|332004936|gb|AED92319.1| DNA repair protein
Rad4 [Arabidopsis thaliana] gi|332004937|gb|AED92320.1|
DNA repair protein Rad4 [Arabidopsis thaliana]
Length = 865
Score = 225 bits (574), Expect = 1e-56
Identities = 133/257 (51%), Positives = 174/257 (67%), Gaps = 10/257 (3%)
Frame = -3
Query: 742 NTLRDEGCSRDVTGNTPGRKEEMDESDWEDGSIPNVESTKNSLNYL-AKGLTIELSGS-P 569
N L D GC GN +EM++SDWED IP+++ST + N + LTIE P
Sbjct: 66 NVLEDRGC-----GNVDD--DEMNDSDWEDCPIPSLDSTVDDNNVDDTRELTIEFDDDVP 118
Query: 568 DSAKRKPVRRASAEDKELAELVHKVHLLCLLARGRLVDAACNDPLIQASLLSLLPTYCLK 389
D+ K+K RA+AEDK AELVHKVHLLCLLARGR+VD+ACNDPLIQA+LLSLLP+Y K
Sbjct: 119 DAKKQKNAYRATAEDKVRAELVHKVHLLCLLARGRIVDSACNDPLIQAALLSLLPSYLTK 178
Query: 388 AS-VSKLSAEALDPIVSWFHNNFSIRSPSNENRSPHSALAFALEAREGTPEEITALFVAL 212
S + K++ + + P++ W NFS+ + +S ++LAFALE+R+GT EE+ AL VAL
Sbjct: 179 VSNLEKVTVKDIAPLLRWVRENFSVSCSPSSEKSFRTSLAFALESRKGTAEELAALAVAL 238
Query: 211 LRALHLTTRFVSILDVASLKPDVDKSESVSGG------GLFQSSTLMVARSNQVST-PIK 53
LRAL LTTRFVSILDVASLKP D++ES G+F++STLMV + +S+ P K
Sbjct: 239 LRALKLTTRFVSILDVASLKPGADRNESSGQNRAKMKHGIFRTSTLMVPKQQAISSYPKK 298
Query: 52 SSSYNENDYIYETPPRG 2
SSS+ +N +E P G
Sbjct: 299 SSSHVKNKSPFEKPQLG 315
>ref|XP_006287057.1| hypothetical protein CARUB_v10000205mg [Capsella rubella]
gi|482555763|gb|EOA19955.1| hypothetical protein
CARUB_v10000205mg [Capsella rubella]
Length = 855
Score = 220 bits (561), Expect = 4e-55
Identities = 123/231 (53%), Positives = 165/231 (71%), Gaps = 8/231 (3%)
Frame = -3
Query: 682 EEMDESDWEDGSIPNVESTKNSLNYLAKGLTIELSGSPDSAKRKPVRRASAEDKELAELV 503
+EM++SDWED IP+++ ++ + LTIE PD+ K+K RA+A+DKE AELV
Sbjct: 80 DEMNDSDWEDCPIPSLDDRVDANVDDTRDLTIEFDDVPDAKKQKNAYRATAKDKERAELV 139
Query: 502 HKVHLLCLLARGRLVDAACNDPLIQASLLSLLPTYCLK-ASVSKLSAEALDPIVSWFHNN 326
HKVHLLCLLARGR+VD ACNDPLIQA+LLSLLP+Y K A++ K++ + + P++ W N
Sbjct: 140 HKVHLLCLLARGRIVDNACNDPLIQAALLSLLPSYLSKVANLEKVTVKDIAPLLRWVREN 199
Query: 325 FSIRSPSNENRSPHSALAFALEAREGTPEEITALFVALLRALHLTTRFVSILDVASLKPD 146
FS+R + +S ++LAFALE+R+GT EE+ AL VAL RAL LTTRFVSILDVASLKP
Sbjct: 200 FSVRCTPSSEKSFRTSLAFALESRKGTAEELGALSVALFRALKLTTRFVSILDVASLKPG 259
Query: 145 VDKSESVSGG------GLFQSSTLMVARSNQVST-PIKSSSYNENDYIYET 14
DK ES S G+F++STLMV + +S+ P KSSS+ E+ + +T
Sbjct: 260 ADKDESSSQNRAKMKHGIFRNSTLMVPKQPAISSHPNKSSSHVEDKTLCQT 310