BLASTX nr result

ID: Paeonia23_contig00016325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00016325
         (507 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    59   9e-10
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    48   1e-06

>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 59.3 bits (142), Expect(2) = 9e-10
 Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
 Frame = +3

Query: 18  EKYILLVCSLPPSNENFVETLMYGKELFPSKR*SLPYTQGS*RRWETKEILKFLEKGWCS 197
           ++ I L+CSLP S E+FV+ +MYG+     K   +       ++   K       +G  +
Sbjct: 97  DQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSGEGLVA 156

Query: 198 WENENRAKHKGRGFISKSNKRIATNVTNCGKEGHWXXXXXXXXXXXX-------DTEVAK 356
                R K+ GR   S+S  R       C KEGH+                   D   AK
Sbjct: 157 -RGRTRKKNNGRRGRSRSKSRGNNKCFKCKKEGHYVKNXPDRKGKENKRNYNSGDATFAK 215

Query: 357 VSIVEHHSDVNVLAVCTSSSRDEWSLDSACTYHVS 461
               E+ +  +VL V  ++S DEW LDS C+YH+S
Sbjct: 216 ----ENSNTTDVLLVXVTNSDDEWILDSGCSYHMS 246



 Score = 29.3 bits (64), Expect(2) = 9e-10
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 454 MCPNKVWFTSYHSIDGGK 507
           M PN  WF++Y  IDGGK
Sbjct: 245 MSPNGDWFSTYQPIDGGK 262


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 47.8 bits (112), Expect(2) = 1e-06
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
 Frame = +3

Query: 27  ILLVCSLPPSNENFVETLMYG------KELFPS-----KR*SLPYTQGS--------*RR 149
           ++L+CSLP S  NF +T++Y       KE++ +     K   +  ++GS         R 
Sbjct: 87  LILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHTKEKMKKMVPSEGSNSQAEGLVVRG 146

Query: 150 WETKEILKFLEKGWCSWENENRAKHKGRGFISKSNKRIATNVTNCGKEGHWXXXXXXXXX 329
            + K+  K   +   S     R+K +GR    K  KR   +++ C K             
Sbjct: 147 RQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIP 206

Query: 330 XXXDTEVAKVSIV-EHHSDVNVL---AVCTSSSRDEWSLDSACTYHV 458
                E  K +IV +  SD  +L   A C  +S D+W LD+ACTYH+
Sbjct: 207 KGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTS-DQWILDTACTYHM 252



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 454 MCPNKVWFTSYHSIDGG 504
           MCPN+ WF +Y ++ GG
Sbjct: 252 MCPNRDWFATYEAVQGG 268


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