BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00014555
         (2662 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1334   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1283   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1283   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1280   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1280   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...  1273   0.0  
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...  1272   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...  1271   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...  1271   0.0  
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...  1257   0.0  
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...  1255   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...  1251   0.0  
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...  1243   0.0  
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...  1238   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...  1236   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...  1224   0.0  
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus...  1221   0.0  
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s...  1221   0.0  
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...  1221   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...  1218   0.0  

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1334 bits (3452), Expect = 0.0
 Identities = 676/908 (74%), Positives = 763/908 (84%), Gaps = 21/908 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPILMA+ L++PERV+ HN
Sbjct: 340  FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHN 399

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQC+ NG  KYPGAK + +PDGS  SLMF GRKR+ADELK GYIV+RHLEDGD+VL
Sbjct: 400  IEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVL 459

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 460  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 519

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLP
Sbjct: 520  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLP 579

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFH 900
            TPAI KP+ELWTGKQLF+VL+RP+ ++RVY+NLTVMEKT+ K   +E TMCP+DGFVYF 
Sbjct: 580  TPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKE-TMCPSDGFVYFR 638

Query: 901  NSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGID 1080
            NSELISGQLGKATLGNGNK+GLFS+LLRDYN HAAA+CMNRLAKLSARWIGNHGFSIGID
Sbjct: 639  NSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGID 698

Query: 1081 DVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRE 1260
            DVQPG  L+ QK+ +I EGY  C E IQ YN+GKL+L  GC+AAQTLE  ITG LN IRE
Sbjct: 699  DVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRE 758

Query: 1261 TTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1440
            TT +VCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHF
Sbjct: 759  TTANVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHF 818

Query: 1441 PRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLED 1620
            PR SKTP AKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LED
Sbjct: 819  PRKSKTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALED 878

Query: 1621 LSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFL 1800
            LSIQYD TVRNANG IVQF YGDDG+DPA+MEGKDG PLNF+RLF+KVKATCP  +   L
Sbjct: 879  LSIQYDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASL 938

Query: 1801 SPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMGFAKGTF----------------- 1929
            S  +I++ + KR  E +T+ E GCS AF  +LS F+   K  F                 
Sbjct: 939  SALQIEETV-KRLKEHNTSAE-GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEE 996

Query: 1930 ----CEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLK 2097
                 EK A+NISGITSKQLQVFLDTC+SRY  KRIEAGT IGAIGAHSI EPGTQMTLK
Sbjct: 997  NLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLK 1056

Query: 2098 TFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLG 2277
            TFHFAGVAS NVTLG PR+KEI+ G+K IS P+ITA LEC++N K A++VKGRIERT LG
Sbjct: 1057 TFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLG 1116

Query: 2278 QVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNV 2457
            QVAKSIKIV+T R   + V LD++ I+ASQL ID+N V+++IL+  RIK KQ  IKVL+ 
Sbjct: 1117 QVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDA 1176

Query: 2458 KRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEG 2637
             +LE+ PQ DRS +HFEL +LK++LP +VV+GI T+ER + NK+     N+  Y L +EG
Sbjct: 1177 GKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKD-----NKVKYNLLVEG 1231

Query: 2638 TGLLATIG 2661
            TGL   +G
Sbjct: 1232 TGLQTVMG 1239


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1283 bits (3321), Expect = 0.0
 Identities = 643/914 (70%), Positives = 743/914 (81%), Gaps = 27/914 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            F QRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPILMAQ LT+PERV+ HN
Sbjct: 337  FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHN 396

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG NKYPGAKF+  PDGS++SLMF  RKR+ADELK GYIVDRHLEDGDIVL
Sbjct: 397  IEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVL 456

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 457  FNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 516

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD  DLP
Sbjct: 517  LMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLP 576

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFH 900
            +PA  KP+ELWTGKQLF +L+RP + +RVYVNLTV EK+++    + +TMCP+DGFVYF 
Sbjct: 577  SPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSG---KGETMCPSDGFVYFR 633

Query: 901  NSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGID 1080
            NSELISGQLGKATLGNGNK+GL+S+LLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGID
Sbjct: 634  NSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGID 693

Query: 1081 DVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRE 1260
            DV PGE L  QK  +I+  Y+KC++ I  +NEGKL +  GCDAAQTLE  +T  LN +R+
Sbjct: 694  DVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRD 753

Query: 1261 TTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1440
              G +CM  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHF
Sbjct: 754  DIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHF 813

Query: 1441 PRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLED 1620
            P  SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LED
Sbjct: 814  PFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALED 873

Query: 1621 LSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFL 1800
            L++ YD TVRNA+  IVQF YGDDG+DP+QME K G PLNF RLFMKVKATCPP     L
Sbjct: 874  LAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSL 933

Query: 1801 SPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFM-----------------------G 1911
            S  EI + +++R S  D TPEGGCS AF  SLS F+                       G
Sbjct: 934  SYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEG 993

Query: 1912 FAKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMT 2091
              +G + EK A NISGIT +QLQVFL+TC+SRYH KR+EAGT IGAIGA SI EPGTQMT
Sbjct: 994  DDRG-YLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMT 1052

Query: 2092 LKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTV 2271
            LKTFHFAGVAS NVTLG PR+KEI+  +K I+ P+IT  L    N  AA+++K RIE+T+
Sbjct: 1053 LKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTL 1112

Query: 2272 LGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVL 2451
            LGQVAKS+KIV+  R  S+ ++LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVL
Sbjct: 1113 LGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVL 1172

Query: 2452 NVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNR----EGY 2619
            N ++LE+ PQ ++ KLHFEL  LK+ LP +VV+GI+T++R + NKE+ K +      E Y
Sbjct: 1173 NPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETY 1232

Query: 2620 QLFIEGTGLLATIG 2661
            +L +EGTGLLA +G
Sbjct: 1233 ELLVEGTGLLAVMG 1246


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 646/921 (70%), Positives = 741/921 (80%), Gaps = 34/921 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGKQGRFR NL  KRVEFTGRTVISPDPNLKITEV +PI MA+ LT+PERVT HN
Sbjct: 336  FVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHN 395

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCVSNG +KYPGA+ L   DGS  SLM  GRKR ADELK G IV+RHLEDGD+VL
Sbjct: 396  IEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVL 455

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HR ++MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+ 
Sbjct: 456  FNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAIL 515

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLP
Sbjct: 516  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLP 575

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTK---SWKREKTMCPNDGFV 891
            TPA+ KPIELWTGKQLFSVLVRP+ S++VY+NLTV EK+++K   + K  +TMCPNDGFV
Sbjct: 576  TPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFV 635

Query: 892  YFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSI 1071
            YF NSELISGQ+GKATLGNGNK+GL+S+LLRDY  HAAA CMNRLAKLSARWIGNHGFSI
Sbjct: 636  YFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSI 695

Query: 1072 GIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNN 1251
            GIDDVQPG++L  +K   I EGYR CD+ I L+N G L    GCDAAQ+LE +IT  LN 
Sbjct: 696  GIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNG 755

Query: 1252 IRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSL 1431
            IRE T +VCM  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSL
Sbjct: 756  IREATANVCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSL 815

Query: 1432 PHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKS 1611
            PHF R +KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+
Sbjct: 816  PHFRRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKA 875

Query: 1612 LEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDP 1791
            LEDLSI YD +VRNA G IVQFCYGDDG+DPAQMEGK GAPLNF+RLF+K KATCP    
Sbjct: 876  LEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGN 935

Query: 1792 TFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-------FAKGTFC------ 1932
              LSP E  + ++ R S+ D +PE GCS AF+ SL  F+         + GT        
Sbjct: 936  KILSPSEFSETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESA 995

Query: 1933 -----------------EKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAH 2061
                              K  QNI+G+T +QLQVFLDTC+SRYH+K+IEAGT IGAIGA 
Sbjct: 996  VDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQ 1055

Query: 2062 SIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQ 2241
            SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+ G+K IS P++TA L  DDN   A+
Sbjct: 1056 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIAR 1115

Query: 2242 IVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRI 2421
            +VK RIE+T LGQ+AK I+IVM+ RS  + + LD+++I  ++L +DAN VK AIL  P++
Sbjct: 1116 MVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKL 1175

Query: 2422 KSKQLDIKVLNVKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIK 2598
            K K   I VL+ ++L ++PQ  DR+KLHF L  LK+MLP +VV+GI T+ R +  +EK K
Sbjct: 1176 KLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDK 1235

Query: 2599 GKNREGYQLFIEGTGLLATIG 2661
             +N + + L +EGTGL A +G
Sbjct: 1236 ARNAKKFSLLVEGTGLQAVMG 1256


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1280 bits (3312), Expect = 0.0
 Identities = 647/919 (70%), Positives = 742/919 (80%), Gaps = 32/919 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERV+ HN
Sbjct: 344  FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHN 403

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQC+ NG +KYPGA+ + +PDG+   L    R + A ELK G IVDRHLEDGD+VL
Sbjct: 404  IEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVL 463

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 464  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALL 523

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VDLP
Sbjct: 524  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLP 583

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREK--------TMCP 876
            TPAI KP+ELWTGKQLFSVL+RP+ ++RVYVNLTV EKT++    R +        TMCP
Sbjct: 584  TPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCP 643

Query: 877  NDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGN 1056
            NDGFVYF NSELISGQLGKATLGNGNK+GL+S+LLRDY  HA + CMNRLAKLSARWIGN
Sbjct: 644  NDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGN 703

Query: 1057 HGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRIT 1236
            HGFSIGIDDVQP + LS +K   I+E Y  C+  I+ YNEGKL+L  GCDAAQTLE  IT
Sbjct: 704  HGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVIT 763

Query: 1237 GQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGF 1416
              LN IRE  G  CM  L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGF
Sbjct: 764  DILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF 823

Query: 1417 IDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMAR 1596
            IDRSLPHFPR +K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R
Sbjct: 824  IDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSR 883

Query: 1597 RLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATC 1776
            RL+K+LEDLSIQYD +VRNA G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATC
Sbjct: 884  RLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATC 943

Query: 1777 PPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKF----------------- 1905
            PP    +LSP+++ + ++K+ +      +  CS AF+ SL KF                 
Sbjct: 944  PPAGQRYLSPQQVSEIVEKQLA---AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVED 1000

Query: 1906 MGF-AKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGT 2082
            +G+  K    E+     SGIT KQL+VF+ TC SRYH KR+EAGT IGAIGA SI EPGT
Sbjct: 1001 IGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGT 1060

Query: 2083 QMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIE 2262
            QMTLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+ITA LEC+DNE AA++VKGRIE
Sbjct: 1061 QMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIE 1120

Query: 2263 RTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDI 2442
            +T+LGQVAKSIKIVMT R  S+V+ LD++ I+ + LCI+A+ VK++I+Q P+IK KQ  I
Sbjct: 1121 KTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHI 1180

Query: 2443 KVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNREG- 2616
            KVL+ ++LEI P VD+SK+HFEL SLK++LP ++V+GI T+ER V+  KEK K K +E  
Sbjct: 1181 KVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENG 1240

Query: 2617 ----YQLFIEGTGLLATIG 2661
                Y+L +EGTGL A +G
Sbjct: 1241 EKKKYRLLVEGTGLQAVMG 1259


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score = 1280 bits (3312), Expect = 0.0
 Identities = 642/914 (70%), Positives = 742/914 (81%), Gaps = 27/914 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            F QRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPILMAQ LT+PERV+ HN
Sbjct: 337  FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHN 396

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG NKYPGAKF+  PDG+++SLMF  RKRYADELK GYIVDRHLEDGDIVL
Sbjct: 397  IEKLRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVL 456

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 457  FNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 516

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD  DLP
Sbjct: 517  LMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLP 576

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFH 900
            +PA  KP+ELWTGKQLF VL+RP + +RVYVNLT+ EK+++    + +TMC +DGFVYF 
Sbjct: 577  SPAFIKPVELWTGKQLFHVLLRPYSKMRVYVNLTLTEKSYSG---KGETMCSSDGFVYFR 633

Query: 901  NSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGID 1080
            NSELISGQLGKATLGNGNK+GL+S+LLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGID
Sbjct: 634  NSELISGQLGKATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGID 693

Query: 1081 DVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRE 1260
            DV PGE L  QK  +I+  Y+KC++ I  +NEGKL +  GCDAAQTLE  +T  LN +R+
Sbjct: 694  DVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRD 753

Query: 1261 TTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1440
              G +CM  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHF
Sbjct: 754  DIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHF 813

Query: 1441 PRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLED 1620
            P  SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LED
Sbjct: 814  PFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALED 873

Query: 1621 LSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFL 1800
            L++ YD TVRNA+  IVQF YGDDG+DP++ME K G PLNF RLFMKVKATCPP     L
Sbjct: 874  LAVYYDSTVRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSL 933

Query: 1801 SPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFM-----------------------G 1911
            S  EI + +++R S  D TPEGGCS AF  SLS F+                       G
Sbjct: 934  SYSEICEIVNERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEG 993

Query: 1912 FAKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMT 2091
              +G + EK   NISGIT KQLQVFL+TC+SRYH KR+EAGT IGAIGA SI EPGTQMT
Sbjct: 994  DDRG-YLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMT 1052

Query: 2092 LKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTV 2271
            LKTFHFAGVAS NVTLG PR+KEI+  +K I+ P+ITA L    N  AA+++K RIE+T+
Sbjct: 1053 LKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTL 1112

Query: 2272 LGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVL 2451
            LGQVAKS+KIV+  R  S+ ++LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVL
Sbjct: 1113 LGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVL 1172

Query: 2452 NVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNR----EGY 2619
            N ++LE+ PQ ++ KLHFEL  LK+ LP +VV+GI+T++R + NKE+ K +      E Y
Sbjct: 1173 NPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETY 1232

Query: 2620 QLFIEGTGLLATIG 2661
            +L +EGTGLLA +G
Sbjct: 1233 ELLVEGTGLLAVMG 1246


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score = 1273 bits (3293), Expect = 0.0
 Identities = 652/925 (70%), Positives = 738/925 (79%), Gaps = 38/925 (4%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRL GKQGRFRQNL+ KRVEFTGRTVISPDPNLKITEV IPI MA+ LT+PERVT HN
Sbjct: 342  FVQRLTGKQGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHN 401

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV+NGS KYPGA+ +T+PDGS   L    RKR A+ELK G IV RHLEDGD+VL
Sbjct: 402  IEKLRQCVNNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVL 461

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA  
Sbjct: 462  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFL 521

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYM DGMD VDLP
Sbjct: 522  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLP 581

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREK----TMCPNDGF 888
            TP++ KPIELWTGKQLFSVL+RP+ ++RVYVNL + EK +++  K  K    TMCPNDG+
Sbjct: 582  TPSVLKPIELWTGKQLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGY 641

Query: 889  VYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFS 1068
            VYF NSELISGQLGKATLGNGNK+GL+SILLRDYN +AAA+CMNRLAKLSARWIGNHGFS
Sbjct: 642  VYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFS 701

Query: 1069 IGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLN 1248
            IGIDDVQPG++L  +K   I+ GYR C++ I  YN G+L L  GCDA QTLE  IT +LN
Sbjct: 702  IGIDDVQPGKKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLN 761

Query: 1249 NIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRS 1428
             +RE  GDVCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG RAP+GFIDRS
Sbjct: 762  KLREEAGDVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRS 821

Query: 1429 LPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMK 1608
            LPHFPR SKTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMARRL K
Sbjct: 822  LPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSK 881

Query: 1609 SLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRD 1788
             LEDL +QYD TV++A GGIVQF YGDDGLDPA MEGK G PLNFDRLFMKVKATC   +
Sbjct: 882  GLEDLCVQYDNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEE 941

Query: 1789 PTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-FAKGTFC----------- 1932
              +LSP +I   +     + + T +G CS +F +SLS F+G  AK   C           
Sbjct: 942  DEYLSPSDISNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVE 1001

Query: 1933 ------------------EKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGA 2058
                              EK AQ +SGIT KQL+VFL TC+ RY  KRIE GT IGAIGA
Sbjct: 1002 NFENIKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGA 1061

Query: 2059 HSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAA 2238
             SI EPGTQMTLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+IT  LE + N  AA
Sbjct: 1062 QSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAA 1121

Query: 2239 QIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPR 2418
            +I+KGRI++TVLGQVAKSIKIVMT RS SV VTLD+K I  +QL +DAN V++ IL+ P+
Sbjct: 1122 RIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPK 1181

Query: 2419 IKSKQLDIKVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKI- 2595
            IK K   I VL   +LE+ P  DR+KLHFEL SLK+MLP +VV+GI T+ERV+  ++K+ 
Sbjct: 1182 IKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLD 1241

Query: 2596 KGKNREG---YQLFIEGTGLLATIG 2661
              +N +G   Y +F+EG GL A +G
Sbjct: 1242 DAENDQGGPKYNMFVEGMGLQAVMG 1266


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score = 1272 bits (3291), Expect = 0.0
 Identities = 637/906 (70%), Positives = 736/906 (81%), Gaps = 27/906 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            F QRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPILMAQ LT+PERV+ HN
Sbjct: 337  FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHN 396

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG NKYPGAKF+  PDGS++SLMF  RKR+ADELK GYIVDRHLEDGDIVL
Sbjct: 397  IEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVL 456

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 457  FNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 516

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MD  DLP
Sbjct: 517  LMGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLP 576

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFH 900
            +PA  KP+ELWTGKQLF +L+RP + +RVYVNLTV EK+++    + +TMCP+DGFVYF 
Sbjct: 577  SPAFIKPVELWTGKQLFHMLLRPYSKMRVYVNLTVTEKSYSG---KGETMCPSDGFVYFR 633

Query: 901  NSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGID 1080
            NSELISGQLGKATLGNGNK+GL+S+LLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGID
Sbjct: 634  NSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGID 693

Query: 1081 DVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRE 1260
            DV PGE L  QK  +I+  Y+KC++ I  +NEGKL +  GCDAAQTLE  +T  LN +R+
Sbjct: 694  DVTPGENLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRD 753

Query: 1261 TTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1440
              G +CM  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHF
Sbjct: 754  DIGKICMKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHF 813

Query: 1441 PRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLED 1620
            P  SK PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LED
Sbjct: 814  PFKSKFPAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALED 873

Query: 1621 LSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFL 1800
            L++ YD TVRNA+  IVQF YGDDG+DP+QME K G PLNF RLFMKVKATCPP     L
Sbjct: 874  LAVYYDSTVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSL 933

Query: 1801 SPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFM-----------------------G 1911
            S  EI + +++R S  D TPEGGCS AF  SLS F+                       G
Sbjct: 934  SYSEICEIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEG 993

Query: 1912 FAKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMT 2091
              +G + EK A NISGIT +QLQVFL+TC+SRYH KR+EAGT IGAIGA SI EPGTQMT
Sbjct: 994  DDRG-YLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMT 1052

Query: 2092 LKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTV 2271
            LKTFHFAGVAS NVTLG PR+KEI+  +K I+ P+IT  L    N  AA+++K RIE+T+
Sbjct: 1053 LKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTL 1112

Query: 2272 LGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVL 2451
            LGQVAKS+KIV+  R  S+ ++LD++ I+ SQLCIDA  VK +ILQ  +IK K+  IKVL
Sbjct: 1113 LGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVL 1172

Query: 2452 NVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNR----EGY 2619
            N ++LE+ PQ ++ KLHFEL  LK+ LP +VV+GI+T++R + NKE+ K +      E Y
Sbjct: 1173 NPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETY 1232

Query: 2620 QLFIEG 2637
            +L +EG
Sbjct: 1233 ELLVEG 1238


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score = 1271 bits (3290), Expect = 0.0
 Identities = 650/917 (70%), Positives = 744/917 (81%), Gaps = 30/917 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQR+KGK GRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERV++HN
Sbjct: 337  FVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHN 396

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG +KYPGA+ + +PDGS   L+   RKR ADELK G +VDRHLEDGDIVL
Sbjct: 397  IEKLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVL 456

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 457  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 516

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDRAAFSL+CSYMGDGMD +DLP
Sbjct: 517  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLP 576

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKRE--------KTMCP 876
            TPA+ KPIELWTGKQLFSVL+RP+ S+RVY+NL V E+ ++K   +         +TMCP
Sbjct: 577  TPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCP 636

Query: 877  NDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGN 1056
            +DGFVY  NSELI GQLGKATLGNGNK+GL+S+LLRDYN HAAA+CMNRLAKLSARWIGN
Sbjct: 637  DDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGN 696

Query: 1057 HGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRIT 1236
            HGFSIGIDDVQPG+RL+ +K   I+  Y+KCDE IQ +NEGKL+   G DAAQTLE  +T
Sbjct: 697  HGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVT 756

Query: 1237 GQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGF 1416
              LNNIR+ TG VCM ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGF
Sbjct: 757  AILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGF 816

Query: 1417 IDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMAR 1596
            IDRSLPHF R SKTPAAKGFVANSFYSGLTATEFFFHTM GREGLVDTAVKTA+TGYM+R
Sbjct: 817  IDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSR 876

Query: 1597 RLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATC 1776
            RL+K+LEDLSI YD TVRNA+G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATC
Sbjct: 877  RLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATC 936

Query: 1777 PPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG--------------- 1911
            PP +   L    I Q ++++ ++ D  P G CS AF +SL  F+                
Sbjct: 937  PPIEQKCLHVGSIMQMLEEQLAKHD--PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNN 994

Query: 1912 -FAKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQM 2088
               K    EK    ISGI+ +QL+VF+ TC+SRY SK IEAGT IGAIGA SI EPGTQM
Sbjct: 995  CAQKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQM 1054

Query: 2089 TLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERT 2268
            TLKTFHFAGVAS N+T G PR+KEI+  +K IS PVITA LE DDN   AQIVKGRIE+T
Sbjct: 1055 TLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKT 1114

Query: 2269 VLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKV 2448
            VLGQVAKSIKIV+T RS SVV+TLD++ I  ++L IDAN VK++ILQ P+IK K+  +KV
Sbjct: 1115 VLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKV 1174

Query: 2449 LNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNRE---- 2613
            L+ ++LE++P  DRS++HFEL SLK++LP +VV+GI T+ER V+Y+K K K   +E    
Sbjct: 1175 LDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETT 1234

Query: 2614 -GYQLFIEGTGLLATIG 2661
              +QL +EGTGL A +G
Sbjct: 1235 KHFQLLVEGTGLQAVMG 1251


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score = 1271 bits (3288), Expect = 0.0
 Identities = 644/913 (70%), Positives = 744/913 (81%), Gaps = 26/913 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGK GRFR NLS KRVE+TGRTVISPDPNLKI+EV IPI MA+ LT+PERVT HN
Sbjct: 339  FVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHN 398

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG +KYPGA+ L    G   SL    RKR ADEL+IG IVDRHLEDGDIVL
Sbjct: 399  IEKLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVL 458

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEA+ 
Sbjct: 459  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAIL 518

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGV+NNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSY+GDGMD +DLP
Sbjct: 519  LMGVENNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLP 578

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKRE------KTMCPND 882
            TPAI KP+ELW+GKQLFS+++RP+ ++RVYVNLTV E+ +T+  K +      KT+CPND
Sbjct: 579  TPAIVKPVELWSGKQLFSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPND 638

Query: 883  GFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHG 1062
            GFVYF NSELISGQ+GK TLGNGNK+GLFS+LLRDY  HAAASCMNRLAKLSARWIGNHG
Sbjct: 639  GFVYFRNSELISGQVGKVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHG 698

Query: 1063 FSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQ 1242
            FSIGIDDVQP E L  +K   I+EGYR+CD+ I+ +N+GKLELL GCDAAQTLE RITG 
Sbjct: 699  FSIGIDDVQPKEILINKKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGV 758

Query: 1243 LNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFID 1422
            LN +R+T G VCM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRR PNGFID
Sbjct: 759  LNGLRDTAGKVCMQTLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFID 818

Query: 1423 RSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRL 1602
            RSLPHFPR SKTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R+L
Sbjct: 819  RSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQL 878

Query: 1603 MKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCP- 1779
            MKSLEDL + YD TVRNA G IVQFCYGDDG+DPA MEGK+G PLNF+RLF+K KA CP 
Sbjct: 879  MKSLEDLFLHYDYTVRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPN 938

Query: 1780 PRDPTFLSPEEIKQAMDKRFSERDTTP-------EGGCSAAFIESLSKFM---------G 1911
              D   LS  ++ + + ++ SE D +        E G SA F+ESL  F+         G
Sbjct: 939  DEDDEILSSSDVSKVVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIKDNAKLTEEG 998

Query: 1912 FA--KGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQ 2085
            F        +K  Q ISGIT KQL VFL+ C+SRYHSK++EAG P+GA GAHSI EPGTQ
Sbjct: 999  FTDEHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQ 1058

Query: 2086 MTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIER 2265
            MTLKTFHFAGVAS NVTLG PRVKEI+ G+K IS P+ITA LE DDN   A+IVKGRIE+
Sbjct: 1059 MTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEK 1118

Query: 2266 TVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIK 2445
            T LGQVAKSIK+VMT RS SVV+TLD+KRI+ + L IDAN VK++IL+  + K K   IK
Sbjct: 1119 TNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIK 1178

Query: 2446 VLNVKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQ 2622
            +L++K+LE++PQ VDRSK+HF+L  LK++LP +VV+GI T++RV+ +K+       E ++
Sbjct: 1179 ILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKD----TKAEKFR 1234

Query: 2623 LFIEGTGLLATIG 2661
            L +EGTG    +G
Sbjct: 1235 LLVEGTGFREVMG 1247


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score = 1257 bits (3253), Expect = 0.0
 Identities = 643/927 (69%), Positives = 740/927 (79%), Gaps = 40/927 (4%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            F+QRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERV+ HN
Sbjct: 109  FIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSHHN 168

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSK-------------VSLMFPGRKRYADELKIGY 321
            IEKLRQCVSNG +KYPGA+ L   DGS              VS+    RKR ADELK G 
Sbjct: 169  IEKLRQCVSNGPDKYPGARMLRRADGSTWQGLICFYYLCGHVSIRV-SRKRLADELKYGD 227

Query: 322  IVDRHLEDGDIVLFNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMH 501
            IV+RHLEDGDIVLFNRQPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMNMH
Sbjct: 228  IVERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMH 287

Query: 502  VPQTEDARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC 681
            VPQTE+ARTEA+ LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC
Sbjct: 288  VPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC 347

Query: 682  SYMGDGMDHVDLPTPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKRE 861
            SYMGD M+H DLPTPA+ KP+ELWTGKQLFSVLVRPN ++RV++NLTV EK ++   +  
Sbjct: 348  SYMGDAMEHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLTVREKNYSNKLQEN 407

Query: 862  K----TMCPNDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLA 1029
            +    TMCP DGFV F NSELISGQLGK TLGNGNK+GL+SILLRDY  HAAA+CMNRLA
Sbjct: 408  EREFETMCPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDYKAHAAAACMNRLA 467

Query: 1030 KLSARWIGNHGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDA 1209
            KLSARWIGNHGFSIGIDDVQP ++L  +K  KINEG + CD+ I+ Y EG L    GCDA
Sbjct: 468  KLSARWIGNHGFSIGIDDVQPSDKLRDEKDQKINEGAKDCDDKIKSYKEGNLPPEPGCDA 527

Query: 1210 AQTLEVRITGQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSV 1389
            AQ+LE  ITG LN IRE TG +CM  L WRNSPLIMSQCGSKGS INISQM+ACVGQQSV
Sbjct: 528  AQSLEAVITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLINISQMVACVGQQSV 587

Query: 1390 GGRRAPNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVK 1569
            GGRRAPNGFIDRSLPHFPR  KTPAAKGFV++SFY GL+ATEFFFHTMGGREGLVDTAVK
Sbjct: 588  GGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFHTMGGREGLVDTAVK 647

Query: 1570 TADTGYMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDR 1749
            TADTGYM+RRL+K+LEDL + YD TVRNA+  I+QFCYGDDG+DPA MEGK+GAPLNF+R
Sbjct: 648  TADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFER 707

Query: 1750 LFMKVKATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFM------- 1908
            LF+K KATCP      LSPE++ + ++ R S++D TPEGGCSAAF  SL  F+       
Sbjct: 708  LFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAF 767

Query: 1909 -----------GFAK---GTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIG 2046
                       G AK       +     +SG T++QL+VFLDTC+SRYHSK+IEAGT IG
Sbjct: 768  KRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIG 827

Query: 2047 AIGAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDN 2226
            AIGA SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+ G+K IS P+ITA LECD+N
Sbjct: 828  AIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNN 887

Query: 2227 EKAAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAIL 2406
               A+IV+GRIE+  LGQVAKSIK VMT R  SVV+TLD++RI+ + L IDAN V+D+IL
Sbjct: 888  VNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSIL 947

Query: 2407 QIPRIKSKQLDIKVLNVKRLEIIP-QVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYN 2583
            Q PRIK K+  I+VL+ K+LEI+P + +RSKL+  L  L  ML  I+V+GI T+ER + +
Sbjct: 948  QTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVIS 1007

Query: 2584 KEKIKGKN-REGYQLFIEGTGLLATIG 2661
             EK K  +  + Y+L +EGTGLL  +G
Sbjct: 1008 SEKDKKTDISKKYKLLVEGTGLLGVMG 1034


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
            gi|561005141|gb|ESW04135.1| hypothetical protein
            PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score = 1255 bits (3248), Expect = 0.0
 Identities = 636/910 (69%), Positives = 742/910 (81%), Gaps = 23/910 (2%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGK GRFR NLS KRVE+TGRTVISPDPNLKI+EV IPILMA  LT+PERVT HN
Sbjct: 339  FVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHN 398

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQCV NG +KYPGA+ L    G   SL    RKR ADEL+IG IVDRHLEDGDIVL
Sbjct: 399  IEKLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVL 458

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEA+ 
Sbjct: 459  FNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAIL 518

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDTFYDR+AF+ +C+++GDG+D +DLP
Sbjct: 519  LMGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLP 578

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTK--SWKRE-KTMCPNDGFV 891
            TPAI KP+ELW+GKQLFS+L+RP+ + +VYVNLTV EKT+TK    KRE KT+CPNDGFV
Sbjct: 579  TPAIVKPVELWSGKQLFSLLLRPHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFV 638

Query: 892  YFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSI 1071
            YF N+ELISGQ+GK TLGNGNK+GLFS+LLRDY  HAAASCMNRLAKLSARWIGNHGFSI
Sbjct: 639  YFRNTELISGQIGKVTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSI 698

Query: 1072 GIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNN 1251
            GIDDVQP E L  +K   ++EGY+KCD  IQ +N+GKLELL GCDA QTLE +ITG LN 
Sbjct: 699  GIDDVQPKEILIKKKDETLSEGYKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNG 758

Query: 1252 IRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSL 1431
            +R+  G VCM  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGF+DRSL
Sbjct: 759  LRDMAGKVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSL 818

Query: 1432 PHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKS 1611
            PHFP N+KTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R+LMKS
Sbjct: 819  PHFPLNAKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKS 878

Query: 1612 LEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPR-D 1788
            +EDL + YD TVRNA G IVQFCYGDDG+DP  MEGK+G PLNF+RLF+K KA CP + D
Sbjct: 879  MEDLFLHYDYTVRNAGGSIVQFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDD 938

Query: 1789 PTFLSPEEIKQAMDKRFSERDTTP-------EGGCSAAFIESLSKFM----GFAKGTFCE 1935
               LS  ++ + + ++ SE   +        E G SA F++SL  F+       + TF +
Sbjct: 939  DEVLSSSDVCKVVQEKLSEFGVSREVEKGVLEVGFSADFVQSLQSFIKDNTKLTEETFTD 998

Query: 1936 KGAQ-------NISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMTL 2094
              +Q        ISGIT  QL+VFL+ C+SRYHSK+IEAG P+GA GAHSI EPGTQMTL
Sbjct: 999  DNSQILKKFGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTL 1058

Query: 2095 KTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVL 2274
            KTFHFAGVAS NVTLG PRVKEI+ G+K IS P+ITA LE  D    A+IVKGRIE+T L
Sbjct: 1059 KTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNL 1118

Query: 2275 GQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLN 2454
            GQVAKSIK+V+T R  SVV+TLD++RI+ + L IDAN VK++ILQ  + K K   IK+L+
Sbjct: 1119 GQVAKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILD 1178

Query: 2455 VKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFI 2631
            VK+L ++PQ  DRSKLHF+L+ LK++LP +VV+GI T +RV+ +KE+ K    E ++L +
Sbjct: 1179 VKKLRVVPQDGDRSKLHFQLNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLV 1238

Query: 2632 EGTGLLATIG 2661
            EGTG    +G
Sbjct: 1239 EGTGFREVMG 1248


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score = 1251 bits (3237), Expect = 0.0
 Identities = 644/927 (69%), Positives = 734/927 (79%), Gaps = 40/927 (4%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGKQGRFR NLS KRVEFTGRTVISPDPNLKITEV IPI MA+ L++PERV+ HN
Sbjct: 313  FVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHN 372

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQ VSNG  KYPGA  + +PDGS   L+   RK  A+EL  G IVDRHLEDGD+VL
Sbjct: 373  IEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVL 432

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 433  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALL 492

Query: 541  LMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDL 717
            LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRAAFSLMCSYM DGMD +DL
Sbjct: 493  LMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDL 552

Query: 718  PTPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREK----TMCPNDG 885
            PTPAI KPIELWTGKQLFSVL+RPN ++RVYVNL V EK ++K  K +K    TMCPNDG
Sbjct: 553  PTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDG 612

Query: 886  FVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLS--ARWIGNH 1059
            FVY  NSELISGQLGKATLGNGNK+GL+SILLRDYN HAAA+CMNRLAKL   ARWIGNH
Sbjct: 613  FVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNH 672

Query: 1060 GFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITG 1239
            GFSIGIDDVQPG++L   K   I+ GY++CD+ I+ YNEGKL L  GCDA QTLE  IT 
Sbjct: 673  GFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITE 732

Query: 1240 QLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFI 1419
            +LN +RE  GDVCM ELHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFI
Sbjct: 733  KLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFI 792

Query: 1420 DRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARR 1599
            DRSLPHFPR SKTPAAKGFVANSFYSGL ATEFFFHTM GREGLVDTAVKTADTGYM+RR
Sbjct: 793  DRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRR 852

Query: 1600 LMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCP 1779
            L+K LEDLSIQYD TVRNA+G IVQF YGDDGLDPA MEGK G PLN DRLF KVKATCP
Sbjct: 853  LIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCP 912

Query: 1780 PRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-----------FAKGT 1926
             R+  +LSP +I   ++    + D    G CS AF +SL+ F+G            A G 
Sbjct: 913  VREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGV 972

Query: 1927 ------------------FCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAI 2052
                                E+ A  I G++ +Q++VF+ TC++RY  KR+E GT IGAI
Sbjct: 973  EDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAI 1032

Query: 2053 GAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEK 2232
            GA SI EPGTQMTLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+ITA LE + N  
Sbjct: 1033 GAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVT 1092

Query: 2233 AAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQI 2412
            AA+I KGRI++TVLGQVAKSIKIVMT RS SVV+TLD+K I+ +QL +DAN VK+AIL+ 
Sbjct: 1093 AARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRT 1152

Query: 2413 PRIKSKQLDIKVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEK 2592
            PRIK K   IKVL+ ++LE+IP  DR ++HFEL +LK++LP I+V+GI T+ER +  ++K
Sbjct: 1153 PRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKK 1212

Query: 2593 IKGKNRE----GYQLFIEGTGLLATIG 2661
              GK  +     Y + +EG GL   +G
Sbjct: 1213 HDGKANDQELPTYNMLVEGMGLDLVMG 1239


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score = 1243 bits (3215), Expect = 0.0
 Identities = 634/922 (68%), Positives = 732/922 (79%), Gaps = 37/922 (4%)
 Frame = +1

Query: 4    VQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHNI 183
            VQRLKGK GRFR NL  KRVE+TGRTVISPDPNLKITEVGIPI MAQ L++PERV+ HNI
Sbjct: 337  VQRLKGKTGRFRGNLCGKRVEYTGRTVISPDPNLKITEVGIPIQMAQILSYPERVSDHNI 396

Query: 184  EKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKR--YADELKIGYIVDRHLEDGDIV 357
            EKLR+CV+NG  KYPGA  L   +G + SL   G+KR  +AD LK G IVDRHLEDGDIV
Sbjct: 397  EKLRRCVANGPFKYPGALVLKCQNGEEWSLK-AGQKRMSHADNLKPGDIVDRHLEDGDIV 455

Query: 358  LFNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEAL 537
            LFNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEA+
Sbjct: 456  LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAV 515

Query: 538  TLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDL 717
             LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSLMCSYMGDG +HVDL
Sbjct: 516  MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTEHVDL 575

Query: 718  PTPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTF----TKSWKREKTMCPNDG 885
            PTPA+ KPIELWTGKQL+SVLVRPN+++RVY+NLTV EK++    T+  +  + MCPNDG
Sbjct: 576  PTPAVVKPIELWTGKQLYSVLVRPNSNVRVYLNLTVREKSYSNRKTEDGREIEAMCPNDG 635

Query: 886  FVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGF 1065
            FVYF NSEL+SGQLGK TLGNGNK+GLFS+LLRDY  HAAASCMNR+AKLSARWIGNHGF
Sbjct: 636  FVYFRNSELLSGQLGKGTLGNGNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGF 695

Query: 1066 SIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQL 1245
            SIGI DVQP + L  +K   I +GY KCD+ I+LY EG+L L  GCDAAQ+LE  IT  L
Sbjct: 696  SIGISDVQPSDILYGEKEKIIKKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVL 755

Query: 1246 NNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDR 1425
            N+IR+ TG +CM  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDR
Sbjct: 756  NDIRDQTGKLCMQTLHWRNSPLIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDR 815

Query: 1426 SLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLM 1605
            SLPHFPR   TPAAKGFVA+SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRL 
Sbjct: 816  SLPHFPRKVNTPAAKGFVASSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLS 875

Query: 1606 KSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPR 1785
            K LEDLS+QYD TVR ANGGIVQFCYGDDG+DPA MEGK GAPL+F RLF + KATCP  
Sbjct: 876  KVLEDLSVQYDKTVRAANGGIVQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAG 935

Query: 1786 DPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG------------------ 1911
            +   LSP+E+ + +  R SE+D TP+GGCS  F  S+ +F+                   
Sbjct: 936  ESESLSPDEVSEIVRSRLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQS 995

Query: 1912 ---FAKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGT 2082
                 K    +   QNISG+T +QL+VFLDTC+SRYHSK+++AGT IG IGA SI EPGT
Sbjct: 996  PGWEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGT 1055

Query: 2083 QMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIE 2262
            QMTLKTFHFAGVAS NVTLG PR+KEI+ G+KNI  P+IT  LECD+N   A++V GRIE
Sbjct: 1056 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIE 1115

Query: 2263 RTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDI 2442
            +T LGQVA+ I+IVM+PR+  V V LD+  I+ + L IDAN VK +IL  PRIK K   I
Sbjct: 1116 KTNLGQVAECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKHEHI 1175

Query: 2443 KVLNVKRLEI-IPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNRE-- 2613
            +V + + +E+   + DR KLHF L  LKS+LP ++VRGI TIERV+ ++EK+K   ++  
Sbjct: 1176 RVPDNQTVEVHSHEKDRRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKKDID 1235

Query: 2614 -------GYQLFIEGTGLLATI 2658
                    Y+LF EG GLLA +
Sbjct: 1236 IKCGDEKKYKLFAEGKGLLAVM 1257


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 629/912 (68%), Positives = 724/912 (79%), Gaps = 26/912 (2%)
 Frame = +1

Query: 4    VQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHNI 183
            VQRLKGKQGRFR NL  KRV+FTGRTVISPDPNLKITEV IP LMAQ LT+ ERVT HNI
Sbjct: 338  VQRLKGKQGRFRSNLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNI 397

Query: 184  EKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVLF 363
            EKLRQCV NG  KYPGA F+    G  +SL +  +KR ADELK G  V+RHLEDG+IVLF
Sbjct: 398  EKLRQCVRNGPVKYPGANFV-ISGGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLF 456

Query: 364  NRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTL 543
            NRQPSLHRMSIM HRA++MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL L
Sbjct: 457  NRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALML 516

Query: 544  MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPT 723
            MGVQ+NLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSYMGDGM+++DLPT
Sbjct: 517  MGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPT 576

Query: 724  PAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFHN 903
            PA+ KP+ELWTGKQLFSVL+RP+  ++VYVNL++MEK ++K  +   TMC NDGFVY  N
Sbjct: 577  PALLKPVELWTGKQLFSVLIRPHAHMKVYVNLSLMEKNYSKGGE---TMCANDGFVYIRN 633

Query: 904  SELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGIDD 1083
            SELISGQLGKATLGNGNK+GLFS+LLRDYN HAAASCMNRLAKLSARWIGNHGFSIGIDD
Sbjct: 634  SELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDD 693

Query: 1084 VQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRET 1263
            V PG  L+ QK  +I  GY  CD FI  Y++GKL L  GC+AAQTLE  IT  LN IR+ 
Sbjct: 694  VLPGSHLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDA 753

Query: 1264 TGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 1443
               VCM ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP
Sbjct: 754  AAKVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFP 813

Query: 1444 RNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDL 1623
            RN KTPAAKGFVANSFY+GLTA EFFFHTMGGREGLVDTAVKTADTGY++RRL+KSLEDL
Sbjct: 814  RNDKTPAAKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDL 873

Query: 1624 SIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLS 1803
            S  YD TVRN++G I+QF YGDDG+DPA+MEGK G PLN DRLFMK+KATCP      LS
Sbjct: 874  STHYDDTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLS 933

Query: 1804 PEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKF---------------------MGFAK 1920
            P EI   ++ R S+ D TPE GCS AF E LS F                     +   K
Sbjct: 934  PSEISTIVNDRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEK 993

Query: 1921 GTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKT 2100
             +  E  A NISGI+ +QL+VFL+TC+SRYH KRIEAGT IGAIGA SI EPGTQMTLKT
Sbjct: 994  FSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKT 1053

Query: 2101 FHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQ 2280
            FHFAGVAS N+TLG PR+KEI+  SK IS P+ITA L CD++EK+A+IVKGRIE+T+LG+
Sbjct: 1054 FHFAGVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGE 1113

Query: 2281 VAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKV---- 2448
            VAK++KI +TP   S+ +TLD+KRIEA Q+ IDA  V D+I +  + K  +  +KV    
Sbjct: 1114 VAKTVKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTF 1173

Query: 2449 -LNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQL 2625
             L  K   ++P++ R ++ + L  L+S+LPKI+V+GI T+ER + N   +KGK      L
Sbjct: 1174 TLPDKLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVIN--NVKGK----LNL 1227

Query: 2626 FIEGTGLLATIG 2661
             +EGT LLA +G
Sbjct: 1228 LVEGTNLLAVMG 1239


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score = 1236 bits (3197), Expect = 0.0
 Identities = 633/919 (68%), Positives = 724/919 (78%), Gaps = 32/919 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERV+ HN
Sbjct: 359  FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHN 418

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQC+ NG +KYPGA+ + +PDG+   L    R + A ELK G IVDRHLEDGD+VL
Sbjct: 419  IEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVL 478

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIM HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 479  FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALL 538

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VDLP
Sbjct: 539  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLP 598

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKRE--------KTMCP 876
            TPAI KP+ELWTGKQLFSVL+RP+ ++RVYVNLTV EKT++    R         +TMCP
Sbjct: 599  TPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCP 658

Query: 877  NDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGN 1056
            NDGFVYF NSELISGQLGKATLG                      CMNRLAKLSARWIGN
Sbjct: 659  NDGFVYFRNSELISGQLGKATLG----------------------CMNRLAKLSARWIGN 696

Query: 1057 HGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRIT 1236
            HGFSIGIDDVQP + LS +K   I+E Y  C+  I+ YNEGKL+L  GCDAAQTLE  IT
Sbjct: 697  HGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVIT 756

Query: 1237 GQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGF 1416
              LN IRE  G  CM  L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGF
Sbjct: 757  DILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF 816

Query: 1417 IDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMAR 1596
            IDRSLPHFPR +K PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R
Sbjct: 817  IDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSR 876

Query: 1597 RLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATC 1776
            RL+K+LEDLSIQYD +VRNA G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATC
Sbjct: 877  RLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATC 936

Query: 1777 PPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKF----------------- 1905
            PP    +LSP+++ + ++K+ +      +  CS AF+ SL KF                 
Sbjct: 937  PPAGQRYLSPQQVSEIVEKQLA---AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVED 993

Query: 1906 MGF-AKGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIAEPGT 2082
            +G+  K    E+     SGIT KQL+VF+ TC SRYH KR+EAGT IGAIGA SI EPGT
Sbjct: 994  IGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGT 1053

Query: 2083 QMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIE 2262
            QMTLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+ITA LEC+DNE AA++VKGRIE
Sbjct: 1054 QMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIE 1113

Query: 2263 RTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDI 2442
            +T+LGQVAKSIKIVMT R  S+V+ LD++ I+ + LCI+A+ VK++I+Q P+IK KQ  I
Sbjct: 1114 KTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHI 1173

Query: 2443 KVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNREG- 2616
            KVL+ ++LEI P VD+SK+HFEL SLK++LP ++V+GI T+ER V+  KEK K K +E  
Sbjct: 1174 KVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENG 1233

Query: 2617 ----YQLFIEGTGLLATIG 2661
                Y+L +EGTGL A +G
Sbjct: 1234 EKKKYRLLVEGTGLQAVMG 1252


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score = 1224 bits (3166), Expect = 0.0
 Identities = 613/921 (66%), Positives = 738/921 (80%), Gaps = 35/921 (3%)
 Frame = +1

Query: 4    VQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHNI 183
            VQRLKGK GRFR NLS KR E+TGRTVISPDPNL+ITEV IP+LMA+ LT+PERV+++N+
Sbjct: 334  VQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNL 393

Query: 184  EKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVLF 363
            EKLRQC+ NG  K+PGA F+  PDG+K+SL +  R+ +A +LK GY V+RHLEDGD+VLF
Sbjct: 394  EKLRQCIRNGPYKHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLF 453

Query: 364  NRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTL 543
            NRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL L
Sbjct: 454  NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 513

Query: 544  MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPT 723
            MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD M+++DLPT
Sbjct: 514  MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPT 573

Query: 724  PAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREK------------- 864
            PA+ KPIELWTGKQLFSVLVRPN   +V++NL V EK ++K  ++++             
Sbjct: 574  PALIKPIELWTGKQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRE 633

Query: 865  TMCPNDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSAR 1044
            TMCPNDG+VYF NSEL+SGQ+GKATLGNGNK+G++S+LLRDYN HAAASCMNRLAK SAR
Sbjct: 634  TMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSAR 693

Query: 1045 WIGNHGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLE 1224
            +IGNHGFSIG+DDVQPGE L+ QK  KI+EGY++C + I L+ +G L L  GC+AAQTLE
Sbjct: 694  FIGNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLE 753

Query: 1225 VRITGQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRA 1404
             +ITG LN IR   G+VCM  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRA
Sbjct: 754  HKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRA 813

Query: 1405 PNGFIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTG 1584
            P+GFIDR+LPHFP NSKTPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TG
Sbjct: 814  PDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETG 873

Query: 1585 YMARRLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKV 1764
            YM+RRLMK LEDLS+ YD TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV
Sbjct: 874  YMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKV 933

Query: 1765 KATCPPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFM------------ 1908
             ATCP R    LSP++IKQ ++ + ++  T+ +GGCS  F E L KF+            
Sbjct: 934  TATCPHRGLDTLSPDDIKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRK 993

Query: 1909 -------GFAKGTFC--EKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAH 2061
                      K   C  E  A NISGI++KQLQVFLDTC SRY+SK IEAG  IGAIGA 
Sbjct: 994  ALHLDEKHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQ 1053

Query: 2062 SIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQ 2241
            SI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+  +K IS P+IT  L    +  +A+
Sbjct: 1054 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSAR 1113

Query: 2242 IVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRI 2421
            IVKG +E+ VLG+VA +IKIV+     ++VV LD++ IEA  + I A++V+ +IL  P+I
Sbjct: 1114 IVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKI 1173

Query: 2422 KSKQLDIKVLNVKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIK 2598
            K K   ++V++  +L I P   D+SKL  EL +LK+MLPK++V+GI T+ERV+ ++ K +
Sbjct: 1174 KLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKE 1233

Query: 2599 GKNREGYQLFIEGTGLLATIG 2661
            GK  E Y L +EGT LLA +G
Sbjct: 1234 GK-LEKYNLLVEGTNLLAVMG 1253


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
          Length = 1109

 Score = 1221 bits (3159), Expect = 0.0
 Identities = 621/926 (67%), Positives = 728/926 (78%), Gaps = 39/926 (4%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQRLKGK GRFR NLS KRVEFTGRTVISPDPNLKI EV +PILMAQ L++PERV+ HN
Sbjct: 46   FVQRLKGKHGRFRGNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHN 105

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IE+LRQCV NG  KYPGAKF+  PDG+++SL    R R+AD+LK GYIV RHL+DGDI+L
Sbjct: 106  IERLRQCVRNGPTKYPGAKFIKHPDGTEISLTSKVRHRHADDLKYGYIVCRHLQDGDIIL 165

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTE+ARTEAL 
Sbjct: 166  FNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 225

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LMGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA+FSL+CSYMGD MD +DLP
Sbjct: 226  LMGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLP 285

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSWKREKTMCPNDGFVYFH 900
            TPA+ KP+ELWTGKQLFS+L+RP+  +RVYVNLTV EK + KS +   TMCP DGFVY  
Sbjct: 286  TPALVKPVELWTGKQLFSILLRPHAKMRVYVNLTVAEKNYGKSGE---TMCPKDGFVYIR 342

Query: 901  NSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFSIGID 1080
            NSELISGQLGKATLGNG+K+GL+S+LLRDY+ HAAA+CMNRLAKLSARWIGNHGFSIGI+
Sbjct: 343  NSELISGQLGKATLGNGSKDGLYSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGIN 402

Query: 1081 DVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLNNIRE 1260
            DVQPG  L+ +K   I++GY +C ++I  Y  G L+LL GC+ A+TLE  ITG LNNIRE
Sbjct: 403  DVQPGIVLNKEKKVTIDKGYGQCIDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRE 462

Query: 1261 TTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHF 1440
             T +VCM  LHWRNSPLIMSQCGSKGSPINI+QM+ACVGQQSVGGRRAPNGF+DR+LPHF
Sbjct: 463  RTANVCMNNLHWRNSPLIMSQCGSKGSPINIAQMVACVGQQSVGGRRAPNGFVDRTLPHF 522

Query: 1441 PRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLED 1620
             R +K P AKGFV NSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMK+LED
Sbjct: 523  EREAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKALED 582

Query: 1621 LSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFL 1800
            LS+ YDGTVRNA+  IVQF YG D +DP QME K G PLNF+RLFMK KATCP  +   L
Sbjct: 583  LSVHYDGTVRNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSL 642

Query: 1801 SPEEIKQAMDK----RFSERDTTPEGGCSAAFIESLSKFMGFA----------------- 1917
            S EEI + MD+    R SE   TPEG  S AF  S +K  G                   
Sbjct: 643  SIEEIDKTMDEIIGDRLSESTGTPEGESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNS 702

Query: 1918 ---------------KGTFCEKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAI 2052
                           KG + EK A NI G+T +QL VFL+TC+SRY  K+IE GT IGAI
Sbjct: 703  DLMLKLNGKEHPDEDKG-YLEKIASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAI 761

Query: 2053 GAHSIAEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEK 2232
            GAHSI EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+  +K I+ P+IT  L+ D+NE 
Sbjct: 762  GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIITTALQSDNNEI 821

Query: 2233 AAQIVKGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQI 2412
             A+IVKGRIE+T+L QVAKSIK     RS S+V+TLD+ +I+ + L +DA  VK++IL+ 
Sbjct: 822  IAKIVKGRIEKTLLEQVAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKT 881

Query: 2413 PRIKSKQLDIKVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLY---N 2583
             R+K K+  +KVL+ ++LEI+   D+ KL FEL  LK+ + K+VV+GI T+ER +     
Sbjct: 882  KRMKLKEQQVKVLDHRKLEIVMHADKKKLQFELHGLKNKISKVVVKGIDTVERAIILNEA 941

Query: 2584 KEKIKGKNREGYQLFIEGTGLLATIG 2661
            KEK    N++  +L +EGTGLL+ +G
Sbjct: 942  KEKDPSANKK-MKLLVEGTGLLSVMG 966


>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Cicer arietinum]
          Length = 1291

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 620/919 (67%), Positives = 733/919 (79%), Gaps = 32/919 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQR+KGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERVT HN
Sbjct: 229  FVQRIKGKQGRFRSNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHN 288

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQC+ NG +KYPGAK L    G+  +L    RKR ADEL+ G IVDRHLEDGD+VL
Sbjct: 289  IEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVL 348

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMS+M HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL 
Sbjct: 349  FNRQPSLHRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALL 408

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LM VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMD +DLP
Sbjct: 409  LMTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLP 468

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSW---KRE-KTMCPNDGF 888
            TPAI KP+ELW+GKQLFS+L+RP+ ++RVYVNLTV EKT        KRE KTMCPNDGF
Sbjct: 469  TPAIIKPVELWSGKQLFSILLRPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGF 528

Query: 889  VYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFS 1068
            VYF NSELISGQLGK TLGNGNK+GLFS+LLRDY  HAAASCMNRLAK SARWIGNHGFS
Sbjct: 529  VYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFS 588

Query: 1069 IGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLN 1248
            IGIDDVQP E L  +K   I  GY +CD FI+ +N+GKLEL  GCDAAQTLE +I  +LN
Sbjct: 589  IGIDDVQPKEILIHRKKETITTGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLN 648

Query: 1249 NIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRS 1428
            ++R+TT  VCM  LHWRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGG RA NGF+DRS
Sbjct: 649  SLRDTTAKVCMQTLHWRNSPLIMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRS 708

Query: 1429 LPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMK 1608
            LPHF + +KTPA KGFVANSF++GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK
Sbjct: 709  LPHFTKKAKTPADKGFVANSFFTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK 768

Query: 1609 SLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCP-PR 1785
            +LEDL + YD TVR+ NGGIVQFCYGDDG+DP+ MEGK+G PLNFDRLF+K KA CP   
Sbjct: 769  ALEDLFLHYDYTVRDTNGGIVQFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDG 828

Query: 1786 DPTFLSPEEIKQAMDKRF-------------SERDTTPEGGCSAAFIESLSKFM---GFA 1917
            D   LS  ++ + + K+              SE D     G S  FI+SL  F+      
Sbjct: 829  DDIILSSSDVCEVIRKKLSEVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVKDNTKL 888

Query: 1918 KGTFCEKGAQN----------ISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSI 2067
                 E  ++N          ISGI+ +QL+VFLD C+SRY  K+IEAGTPIGAIGAHSI
Sbjct: 889  TEAIAENDSKNLTNLKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSI 948

Query: 2068 AEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIV 2247
             EPGTQMTLKTFHFAGVAS NVTLG PR+ EI+ G+K+I  P++TA LE DDN   A++V
Sbjct: 949  GEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNANTARMV 1008

Query: 2248 KGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKS 2427
            KGRIE+T LGQVAKSIK+VMT RS +VV++LD++RI+ + L IDA+ VK++IL+  ++K 
Sbjct: 1009 KGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESILRTAKLKL 1068

Query: 2428 KQLDIKVLNVKRLEIIPQVD-RSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGK 2604
            K  ++KVL++K+L++ P++  R+++HF+L+ LK++LP +VV+G+ T+ER +   +K K K
Sbjct: 1069 KAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPSVVVKGVKTVERAVLEIDK-KDK 1127

Query: 2605 NREGYQLFIEGTGLLATIG 2661
              E + L +EGTGL   +G
Sbjct: 1128 KVEKFALLVEGTGLQQVLG 1146


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 620/919 (67%), Positives = 733/919 (79%), Gaps = 32/919 (3%)
 Frame = +1

Query: 1    FVQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHN 180
            FVQR+KGKQGRFR NLS KRVE+TGRTVISPDPNLKITEV IPI MA+ LT+PERVT HN
Sbjct: 337  FVQRIKGKQGRFRSNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHN 396

Query: 181  IEKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVL 360
            IEKLRQC+ NG +KYPGAK L    G+  +L    RKR ADEL+ G IVDRHLEDGD+VL
Sbjct: 397  IEKLRQCLRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVL 456

Query: 361  FNRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALT 540
            FNRQPSLHRMS+M HRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL 
Sbjct: 457  FNRQPSLHRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALL 516

Query: 541  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLP 720
            LM VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMD +DLP
Sbjct: 517  LMTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLP 576

Query: 721  TPAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKSW---KRE-KTMCPNDGF 888
            TPAI KP+ELW+GKQLFS+L+RP+ ++RVYVNLTV EKT        KRE KTMCPNDGF
Sbjct: 577  TPAIIKPVELWSGKQLFSILLRPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGF 636

Query: 889  VYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIGNHGFS 1068
            VYF NSELISGQLGK TLGNGNK+GLFS+LLRDY  HAAASCMNRLAK SARWIGNHGFS
Sbjct: 637  VYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFS 696

Query: 1069 IGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRITGQLN 1248
            IGIDDVQP E L  +K   I  GY +CD FI+ +N+GKLEL  GCDAAQTLE +I  +LN
Sbjct: 697  IGIDDVQPKEILIHRKKETITTGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLN 756

Query: 1249 NIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRS 1428
            ++R+TT  VCM  LHWRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGG RA NGF+DRS
Sbjct: 757  SLRDTTAKVCMQTLHWRNSPLIMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRS 816

Query: 1429 LPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMK 1608
            LPHF + +KTPA KGFVANSF++GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK
Sbjct: 817  LPHFTKKAKTPADKGFVANSFFTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMK 876

Query: 1609 SLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCP-PR 1785
            +LEDL + YD TVR+ NGGIVQFCYGDDG+DP+ MEGK+G PLNFDRLF+K KA CP   
Sbjct: 877  ALEDLFLHYDYTVRDTNGGIVQFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDG 936

Query: 1786 DPTFLSPEEIKQAMDKRF-------------SERDTTPEGGCSAAFIESLSKFM---GFA 1917
            D   LS  ++ + + K+              SE D     G S  FI+SL  F+      
Sbjct: 937  DDIILSSSDVCEVIRKKLSEVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVKDNTKL 996

Query: 1918 KGTFCEKGAQN----------ISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSI 2067
                 E  ++N          ISGI+ +QL+VFLD C+SRY  K+IEAGTPIGAIGAHSI
Sbjct: 997  TEAIAENDSKNLTNLKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSI 1056

Query: 2068 AEPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIV 2247
             EPGTQMTLKTFHFAGVAS NVTLG PR+ EI+ G+K+I  P++TA LE DDN   A++V
Sbjct: 1057 GEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNANTARMV 1116

Query: 2248 KGRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKS 2427
            KGRIE+T LGQVAKSIK+VMT RS +VV++LD++RI+ + L IDA+ VK++IL+  ++K 
Sbjct: 1117 KGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESILRTAKLKL 1176

Query: 2428 KQLDIKVLNVKRLEIIPQVD-RSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGK 2604
            K  ++KVL++K+L++ P++  R+++HF+L+ LK++LP +VV+G+ T+ER +   +K K K
Sbjct: 1177 KAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPSVVVKGVKTVERAVLEIDK-KDK 1235

Query: 2605 NREGYQLFIEGTGLLATIG 2661
              E + L +EGTGL   +G
Sbjct: 1236 KVEKFALLVEGTGLQQVLG 1254


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score = 1218 bits (3152), Expect = 0.0
 Identities = 614/918 (66%), Positives = 737/918 (80%), Gaps = 32/918 (3%)
 Frame = +1

Query: 4    VQRLKGKQGRFRQNLSAKRVEFTGRTVISPDPNLKITEVGIPILMAQTLTFPERVTSHNI 183
            VQRLKGK GRFR NLS KR E+TGRTVISPDPNLKITEV IP+LMA+ LT+PERV+++NI
Sbjct: 331  VQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNI 390

Query: 184  EKLRQCVSNGSNKYPGAKFLTFPDGSKVSLMFPGRKRYADELKIGYIVDRHLEDGDIVLF 363
            EKLRQC+ NG  KYPGA F+T PDG K SL +  R+  A +LK G IV+RHLEDGD+VLF
Sbjct: 391  EKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLF 450

Query: 364  NRQPSLHRMSIMSHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEDARTEALTL 543
            NRQPSLHRMSIMSHRA+IMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTE+ARTEAL L
Sbjct: 451  NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 544  MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDHVDLPT 723
            MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDTFYDR++F+L+CSY+GD M+++DLPT
Sbjct: 511  MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPT 570

Query: 724  PAIFKPIELWTGKQLFSVLVRPNTSLRVYVNLTVMEKTFTKS-WKRE---------KTMC 873
            PA+ KPIELWTGKQLFSVLVRPN   RV++NL V EK ++K   K+E         +TMC
Sbjct: 571  PALIKPIELWTGKQLFSVLVRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMC 630

Query: 874  PNDGFVYFHNSELISGQLGKATLGNGNKNGLFSILLRDYNEHAAASCMNRLAKLSARWIG 1053
            PNDG+VYF NSEL+SGQ+GKATLGNGNK+GL+S+LLRDYN HAAASCMNRLAK SAR+IG
Sbjct: 631  PNDGYVYFRNSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIG 690

Query: 1054 NHGFSIGIDDVQPGERLSCQKTNKINEGYRKCDEFIQLYNEGKLELLGGCDAAQTLEVRI 1233
            NHGFSIG+DDVQPGE L+ QK  +I+ GY+KC + I L+ +G L L  GC+AAQTLE  I
Sbjct: 691  NHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNI 750

Query: 1234 TGQLNNIRETTGDVCMAELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNG 1413
            TG LN IR   G+VCM  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+G
Sbjct: 751  TGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDG 810

Query: 1414 FIDRSLPHFPRNSKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMA 1593
            F++R+LPHFP NSKTPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+
Sbjct: 811  FLNRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMS 870

Query: 1594 RRLMKSLEDLSIQYDGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKAT 1773
            RRLMK LEDLS+ YD TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV AT
Sbjct: 871  RRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMAT 930

Query: 1774 CPPRDPTFLSPEEIKQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-------------- 1911
            CP R    LSPE IKQ ++ +  + DT+ +GGCS  F ++L++F+               
Sbjct: 931  CPQRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALH 990

Query: 1912 -----FAKGTFC--EKGAQNISGITSKQLQVFLDTCMSRYHSKRIEAGTPIGAIGAHSIA 2070
                   K   C  E  A  ISGI++KQLQVFLDTC+SRY SK+IEAG  IGAIGA SI 
Sbjct: 991  LHEDHVEKKDSCVEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIG 1050

Query: 2071 EPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVK 2250
            EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+  ++ IS P+ITA L    +  +A+IVK
Sbjct: 1051 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVK 1110

Query: 2251 GRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSK 2430
            G +E+ VLG+VA +I+IV+     +++V LD++ IE+  + I A++V+ +IL  P+IK K
Sbjct: 1111 GSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLK 1170

Query: 2431 QLDIKVLNVKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKN 2607
               ++V++  +L I P   D+ KL  EL +LKS+LPK++V+GI T+ERV+ ++ K+K + 
Sbjct: 1171 SEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNET 1230

Query: 2608 REGYQLFIEGTGLLATIG 2661
             E YQL +EGT LLA +G
Sbjct: 1231 -ERYQLLVEGTNLLAVMG 1247