BLASTX nr result

ID: Paeonia23_contig00013616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00013616
         (831 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007014649.1| Nuclear pore complex protein, putative [Theo...    64   5e-08

>ref|XP_007014649.1| Nuclear pore complex protein, putative [Theobroma cacao]
            gi|508785012|gb|EOY32268.1| Nuclear pore complex protein,
            putative [Theobroma cacao]
          Length = 1866

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 60/182 (32%), Positives = 76/182 (41%), Gaps = 12/182 (6%)
 Frame = +2

Query: 296  VNSQKTPLVRQFQNTDGQQFRLSGQQITKSEQVFMNLPDLVEASRMAGGFSNTETAKTAG 475
            V  QK P  +  Q    Q+  LSGQQ T S Q F+    L          S TET K AG
Sbjct: 549  VGQQKPPTTKPLQEAGSQRKLLSGQQGTNSGQSFLKTSQLEGPGNKLRDGSQTETQKIAG 608

Query: 476  VGSSTNTFVKKPPTDISDQLDFKDPQKHIETGKDFTGKIRSTGLHNISTLSWP------- 634
            VGS   +F  K   D   Q + ++  K+ E  K+  GK  S G  + S   WP       
Sbjct: 609  VGSIA-SFGGKFSNDTLTQPNHENVPKNFELVKESVGKTGSIGSQSASFQPWPIPSSQSL 667

Query: 635  -SGKITY----DAGSPFPSSSTFQGHKPENDGANAAAPNITGPCPNITGPSVGDPKYLKE 799
             SGK       DA S F  SS  Q  +    G       +T     I+  +VG P +LK+
Sbjct: 668  MSGKHMLSEESDARSSFSPSSHIQCSRSLGSG-------VTMDTTCISISNVGKPSHLKD 720

Query: 800  TA 805
            TA
Sbjct: 721  TA 722


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