BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00012346
         (677 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006390091.1| RNA dependent RNA polymerase [Persimmon cryp...   301   1e-79
gb|AEJ07892.1| putative RNA-dependent RNA polymerase [Pepper cry...   290   4e-76
gb|ADP24757.1| RNA-dependent RNA polymerase [Beet cryptic virus 2]    280   2e-73
gb|AGQ49482.1| RNA-dependent RNA polymerase [Beet cryptic virus 2]    279   7e-73
dbj|BAA34783.1| RNA-dependent RNA polymerase [Pyrus pyrifolia]        277   2e-72
gb|AEJ07890.1| putative RNA-dependent RNA polymerase [Pepper cry...   270   4e-70
gb|AAB27624.1| putative RNA-dependent RNA polymerase [Beet crypt...   261   1e-67
ref|YP_002364401.1| putative RNA-dependent RNA polymerase [Rapha...   261   2e-67
gb|AGH12859.1| RNA-dependent RNA polymerase [Citrullus lanatus c...   254   2e-65
gb|AFO65948.1| RNA-dependent RNA polymerase [Alphacryptovirus JF...   252   7e-65
gb|ABU55400.1| RNA-dependent RNA polymerase [Black raspberry cry...   180   3e-43
ref|YP_009026407.1| RNA dependent RNA polymerase [Pigeon pea lat...   160   5e-37
ref|YP_001274391.1| RNA-dependent RNA polymerase [Fragaria chilo...   151   2e-34
gb|ADE76327.1| unknown [Picea sitchensis]                             149   8e-34
gb|ABV89762.1| putative RNA-dependent RNA polymerase [Rosa multi...   149   1e-33
gb|ABY60412.1| RNA dependent RNA polymerase [Rose cryptic virus 1]    149   1e-33
ref|YP_001686783.1| putative RNA dependent RNA polymerse [Raphan...   148   2e-33
ref|YP_001686786.1| RNA-dependent RNA polymerase [Rose cryptic v...   148   2e-33
gb|ABC96789.2| RNA-dependent RNA polymerase-like protein [Pepper...   147   2e-33
ref|YP_004429258.1| RNA-dependent RNA polymerase [Fig cryptic vi...   144   3e-32

>ref|YP_006390091.1| RNA dependent RNA polymerase [Persimmon cryptic virus]
           gi|388877111|emb|CCH50609.1| RNA dependent RNA
           polymerase [Persimmon cryptic virus]
          Length = 477

 Score =  301 bits (772), Expect = 1e-79
 Identities = 145/209 (69%), Positives = 167/209 (79%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EIHAAFD+L++ IEFPN ET +C+ ICR LFIHKKIAAPDGK YW+HKGIPSGSY+TSII
Sbjct: 267 EIHAAFDLLKQRIEFPNFETEQCYEICRQLFIHKKIAAPDGKVYWAHKGIPSGSYYTSII 326

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSIINRLRIEYIW  L+G GP ICYTQGDDSL G+ E   PE +A IA  + W +NPAKT
Sbjct: 327 GSIINRLRIEYIWIKLRGHGPTICYTQGDDSLCGDDERIEPERIADIANPIGWLINPAKT 386

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
            T+R  E++TFLGRT YGGLN RDL RCLRLLI+PEYPV +G ISA+RA SIA+D G TS
Sbjct: 387 ATTRYPEYITFLGRTCYGGLNHRDLIRCLRLLIYPEYPVPSGAISAYRANSIAEDCGGTS 446

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
            +LN IA+RL RKYG     EVP+ LR Y
Sbjct: 447 SILNDIARRLTRKYGRVSHEEVPKELRVY 475


>gb|AEJ07892.1| putative RNA-dependent RNA polymerase [Pepper cryptic virus 2]
          Length = 478

 Score =  290 bits (741), Expect = 4e-76
 Identities = 143/209 (68%), Positives = 168/209 (80%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+ AFD+++ +I FPN ET  CF ICR LFIHKKIAAPDG  YWS KGIPSGSYFTSII
Sbjct: 268 EINMAFDLIKTLIMFPNIETELCFEICRQLFIHKKIAAPDGNIYWSRKGIPSGSYFTSII 327

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSI+NRLR+EYI+R     GP +CYTQGDDSLIG     +P+ L++IA  LNW LNPAKT
Sbjct: 328 GSIVNRLRVEYIFRKAYDVGPKMCYTQGDDSLIGVDFRVDPDRLSEIAAPLNWKLNPAKT 387

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           + S   E VTFLGRT YGG+NQRDLKRCLRLLIFPE+PV +G ISA+RA SIAQDAG TS
Sbjct: 388 DVSLYPEHVTFLGRTMYGGINQRDLKRCLRLLIFPEFPVPSGEISAYRAVSIAQDAGGTS 447

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           E+LN+IAKRLRR+YG+AE   VP++ + Y
Sbjct: 448 EILNSIAKRLRRQYGVAEEHAVPKHFKLY 476


>gb|ADP24757.1| RNA-dependent RNA polymerase [Beet cryptic virus 2]
          Length = 475

 Score =  280 bits (717), Expect = 2e-73
 Identities = 135/209 (64%), Positives = 167/209 (79%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+AAFDI++  I FPN ET + F I R LFIHKK+AAP+GK Y  HKGIPSGSYFTSII
Sbjct: 265 EINAAFDIIKSKITFPNLETEQAFEISRQLFIHKKLAAPNGKIYRIHKGIPSGSYFTSII 324

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GS++NRLRIEY+W +   RGP +C+TQGDDSLIG+ E  +P D+A   + LNW++N +K+
Sbjct: 325 GSVVNRLRIEYLWNLKFNRGPKVCFTQGDDSLIGDDELYSPMDMAAFVKPLNWFINTSKS 384

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
            TS+  E +TFLGR+S GGLNQRDLKRCLRLLI PEYPV +G ISAFRA SI +D+G TS
Sbjct: 385 MTSKVPEAITFLGRSSLGGLNQRDLKRCLRLLILPEYPVTSGDISAFRANSIWRDSGSTS 444

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           ++L+ IA  LRRKYGIA+  +VPRYLRP+
Sbjct: 445 QILHEIANALRRKYGIAKEQDVPRYLRPW 473


>gb|AGQ49482.1| RNA-dependent RNA polymerase [Beet cryptic virus 2]
          Length = 475

 Score =  279 bits (713), Expect = 7e-73
 Identities = 135/209 (64%), Positives = 166/209 (79%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+AAFDI++  I FPN ET + F I R LFIHKK+AAP+GK Y  HKGIPSGSYFTSII
Sbjct: 265 EINAAFDIIKSKITFPNLETEQAFEISRQLFIHKKLAAPNGKIYRIHKGIPSGSYFTSII 324

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GS++NRLRIEY W +   RGP +C+TQGDDSLIG+ E  +P D+A   + LNW++N +K+
Sbjct: 325 GSVVNRLRIEYSWNLKFNRGPKVCFTQGDDSLIGDDELYSPTDMAAFVKPLNWFINTSKS 384

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
            TS+  E +TFLGR+S GGLNQRDLKRCLRLLI PEYPV +G ISAFRA SI +D+G TS
Sbjct: 385 MTSKVPEAITFLGRSSLGGLNQRDLKRCLRLLILPEYPVTSGDISAFRANSIWRDSGSTS 444

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           ++L+ IA  LRRKYGIA+  +VPRYLRP+
Sbjct: 445 QILHGIANALRRKYGIAKEQDVPRYLRPW 473


>dbj|BAA34783.1| RNA-dependent RNA polymerase [Pyrus pyrifolia]
          Length = 477

 Score =  277 bits (709), Expect = 2e-72
 Identities = 135/209 (64%), Positives = 160/209 (76%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+AAFDI+  +IEFPN  T   F + R LFIHKKIAAPDG  YWSHKGIPSGSYFTSII
Sbjct: 267 EINAAFDIIMDLIEFPNYPTYVAFELSRQLFIHKKIAAPDGYIYWSHKGIPSGSYFTSII 326

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSIINRLRIEY+WR + G GP+ CYTQGDDSL  + E+T PE  A+IA  + W LNP KT
Sbjct: 327 GSIINRLRIEYLWRKITGHGPLACYTQGDDSLSCDDEFTPPEKFAEIANQIGWVLNPEKT 386

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           E S     V FLGRT  GGLN R++KRCLRLLI+PEYPV++GRISA+RA+SI++D G  S
Sbjct: 387 EYSTIPSEVHFLGRTMLGGLNTREIKRCLRLLIYPEYPVDSGRISAYRAKSISEDVGRLS 446

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           E+LN I +RL+ +YGIA   EVP Y + Y
Sbjct: 447 ELLNKIERRLQGQYGIASDEEVPDYFKRY 475


>gb|AEJ07890.1| putative RNA-dependent RNA polymerase [Pepper cryptic virus 1]
          Length = 479

 Score =  270 bits (689), Expect = 4e-70
 Identities = 128/209 (61%), Positives = 159/209 (76%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EIHAAFDI++  ++FPN ET + F I R LFIHKK+A PDG  Y SHKGIPSGSY+TS++
Sbjct: 267 EIHAAFDIIKSYVDFPNYETEQAFEITRQLFIHKKVAVPDGYIYESHKGIPSGSYYTSLV 326

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSIIN LRI Y+WR+L G  P  C+T GDDSL+G++ Y NP+ + + A  L W+ NP KT
Sbjct: 327 GSIINYLRINYLWRLLTGHPPQQCHTLGDDSLVGDNSYVNPQAIEEAANKLGWHFNPDKT 386

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           + S   E +TFLGRT  GGLN+RDL +C+RLL++PEYPVE+GRISA+RA+SIAQDAG  S
Sbjct: 387 QYSTVPEEITFLGRTYVGGLNKRDLTKCIRLLVYPEYPVESGRISAYRAKSIAQDAGGLS 446

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           EVLN IA +LRR YG A   EVP Y + Y
Sbjct: 447 EVLNRIADKLRRIYGTASEEEVPIYFKRY 475


>gb|AAB27624.1| putative RNA-dependent RNA polymerase [Beet cryptic virus 3]
          Length = 478

 Score =  261 bits (668), Expect = 1e-67
 Identities = 126/209 (60%), Positives = 157/209 (75%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+ AF++L++ IEFPN ET   F + R LF HKK+AAPDG  Y  HKGIPSGSY+TSI+
Sbjct: 268 EINCAFNLLKERIEFPNEETELAFELSRILFKHKKLAAPDGNIYMIHKGIPSGSYYTSIV 327

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GS++NRLRIEYIWR+L  R P  CYTQGDDSLIGE+    PE +A+ A    W +NP KT
Sbjct: 328 GSVVNRLRIEYIWRVLFSRSPHRCYTQGDDSLIGETFLVEPETVAREAAKYGWIMNPDKT 387

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           E S    +VTFLGRT++G +N R L +CLRLL+FPEYPV +GRISA+RA SIA+D G  S
Sbjct: 388 EYSTDPGYVTFLGRTAHGFMNARSLDKCLRLLMFPEYPVTSGRISAYRAESIARDCGGLS 447

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           EV+N +A+RLRR+YG+A   EVP Y + Y
Sbjct: 448 EVINLVARRLRRQYGVASEDEVPHYFKRY 476


>ref|YP_002364401.1| putative RNA-dependent RNA polymerase [Raphanus sativus cryptic
           virus 3] gi|217039787|gb|ACJ76981.1| putative
           RNA-dependent RNA polymerase [Raphanus sativus cryptic
           virus 3]
          Length = 481

 Score =  261 bits (666), Expect = 2e-67
 Identities = 124/209 (59%), Positives = 159/209 (76%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI +AF I++    FP+ ET + F I + LFIHKK+AAPDGK Y++HKGIPSGSY+TS++
Sbjct: 269 EIESAFTIIKSKTIFPDRETEDAFEITKQLFIHKKVAAPDGKIYFAHKGIPSGSYYTSLV 328

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSI+NRLRIEY++R++ GRGP IC+T GDDSL+G+ E   P     IA  + WY N  KT
Sbjct: 329 GSIVNRLRIEYLYRLILGRGPKICHTLGDDSLVGDDELIVPSSFGLIANRIGWYFNIEKT 388

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           E SR  E V+FLGR+  GGLN RDLKRCLRLL+FPEYPV +GRISA+RA+SIA+D G  S
Sbjct: 389 EYSRIPEMVSFLGRSYKGGLNVRDLKRCLRLLVFPEYPVPSGRISAYRAKSIAEDCGGIS 448

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           ++LN +A RL+R+YG+A   EVP Y + Y
Sbjct: 449 DLLNRVAARLKRQYGLASEEEVPIYFKRY 477


>gb|AGH12859.1| RNA-dependent RNA polymerase [Citrullus lanatus cryptic virus]
          Length = 415

 Score =  254 bits (649), Expect = 2e-65
 Identities = 123/192 (64%), Positives = 146/192 (76%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI AAFDI+  +++FPN ET   F + + LFIHKKIAAPDGK YW+HKGIPSGSYFTSII
Sbjct: 221 EIEAAFDIVLNLLDFPNRETKLMFELSKQLFIHKKIAAPDGKIYWAHKGIPSGSYFTSII 280

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSIINR  I  +WR + G GPI+CYTQGDDSL G++    PE  A +A  + WY N  KT
Sbjct: 281 GSIINRTEILMLWRTITGHGPIVCYTQGDDSLCGDNILIPPERFAMVANPIGWYFNQEKT 340

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           E S   E +TFLGR+  GGLN+RDLKRCLRLLIFPEYPVE+GRISA+RA+SI+ D G   
Sbjct: 341 EYSTIPELITFLGRSYAGGLNKRDLKRCLRLLIFPEYPVESGRISAYRAQSISDDVGGLG 400

Query: 136 EVLNTIAKRLRR 101
           +VLN +A RLRR
Sbjct: 401 DVLNKLADRLRR 412


>gb|AFO65948.1| RNA-dependent RNA polymerase [Alphacryptovirus JF-2012]
          Length = 478

 Score =  252 bits (644), Expect = 7e-65
 Identities = 124/209 (59%), Positives = 151/209 (72%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI+ +FDI++  + FPN ET + F I R LF+HKK+AAPDG  Y +HKGIPSGSY+TS++
Sbjct: 266 EINTSFDIIKSKVIFPNYETEQAFEITRQLFLHKKVAAPDGYIYEAHKGIPSGSYYTSMV 325

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GSI+NRLRIEYIWRI  G GPI C T  DDSL G+  +     LA IA  + WY N  KT
Sbjct: 326 GSIVNRLRIEYIWRIATGHGPIHCETLVDDSLCGDDIFVPATQLADIANRIGWYFNADKT 385

Query: 316 ETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGHTS 137
           E S   E VTFLGRTS G LN RDL +CLRLL++PEYPV +GRISA+RARSIA D+G  S
Sbjct: 386 EYSTIPEGVTFLGRTSTGNLNSRDLTKCLRLLVYPEYPVTSGRISAYRARSIADDSGGLS 445

Query: 136 EVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           ++LN +A RL R YGIA   E+P Y + Y
Sbjct: 446 DLLNQVAIRLERSYGIASEEEIPAYFKRY 474


>gb|ABU55400.1| RNA-dependent RNA polymerase [Black raspberry cryptic virus]
          Length = 393

 Score =  180 bits (457), Expect = 3e-43
 Identities = 83/122 (68%), Positives = 99/122 (81%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EIHAAFDIL++ ++FPN ET + F I R LFIHKKIAAPDGK YWSHKGIPSGSY+TSII
Sbjct: 267 EIHAAFDILKQFVQFPNVETEQAFEISRQLFIHKKIAAPDGKIYWSHKGIPSGSYYTSII 326

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKT 317
           GS++N LRIEYI+R + G GP +CYTQGDDS+IG   Y +P  L++ A+ L W LNPAKT
Sbjct: 327 GSVVNHLRIEYIFRTVTGNGPKVCYTQGDDSIIGLDSYIDPSLLSEAAQPLGWVLNPAKT 386

Query: 316 ET 311
           ET
Sbjct: 387 ET 388


>ref|YP_009026407.1| RNA dependent RNA polymerase [Pigeon pea latent virus]
           gi|575096426|emb|CDL67777.1| RNA dependent RNA
           polymerase [Pigeon pea latent virus]
          Length = 475

 Score =  160 bits (404), Expect = 5e-37
 Identities = 92/201 (45%), Positives = 127/201 (63%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI  AF++LE ++ FP+S     +R    LFI++KIA+P+G  Y   +GIPSGS FT+II
Sbjct: 254 EIRFAFELLESLLVFPSSVEQHVWRFIIELFIYRKIASPNGVMYLKTQGIPSGSCFTNII 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGES--EYTNPEDLAKIAESLNWYLNPA 323
           GSI N +RI+YI+R L  R   + +T GDDSL G S  ++   E++A++    NW +N  
Sbjct: 314 GSITNYVRIQYIFRRLTNRFANV-FTHGDDSLAGVSAVQFIPMENIAQVCAEFNWTINVD 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K++ SR  E VTFL R      + RD   CLR+L +PEYPVE+G +S  RA SI++DAG 
Sbjct: 373 KSDVSRIAEAVTFLSRNVREMSHARDELTCLRMLKYPEYPVESGAVSTLRALSISKDAGL 432

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
            S  L  I K L  KYG A++
Sbjct: 433 NSHYLYKIYKFLDIKYGKADS 453


>ref|YP_001274391.1| RNA-dependent RNA polymerase [Fragaria chiloensis cryptic virus]
           gi|117912931|gb|AAZ06131.2| RNA-dependent RNA polymerase
           [Fragaria chiloensis cryptic virus]
          Length = 479

 Score =  151 bits (382), Expect = 2e-34
 Identities = 90/201 (44%), Positives = 120/201 (59%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI  AF +LE I+ FP+S     +     LFI++KIAAP+GK Y    GIPSGS FT+II
Sbjct: 254 EIRFAFSLLESILIFPSSVESYIWHFIIELFIYRKIAAPNGKVYLKTLGIPSGSCFTNII 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGES--EYTNPEDLAKIAESLNWYLNPA 323
           GSI+N +RI+Y++  L     +  +T GDDSL+G S  +Y   ++   I    NW +N A
Sbjct: 314 GSIVNYVRIQYLFFRLTNNF-VTVFTHGDDSLVGVSTTQYVQMDNFEPICAEHNWTINIA 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+  S   E V+FL R      + RD   CLR+L FPEY VE+G +S  RA SI QDAG 
Sbjct: 373 KSAVSHEAEGVSFLSRKVREHCHARDELLCLRMLKFPEYVVESGAMSTLRAHSIHQDAGI 432

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
            S  L +I K L  +YG A++
Sbjct: 433 NSRYLYSIYKYLLHRYGKADS 453


>gb|ADE76327.1| unknown [Picea sitchensis]
          Length = 413

 Score =  149 bits (376), Expect = 8e-34
 Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI  AF  LE+++ +P+    + +   + LFI++KIA PD K      GIPSGS FT+I+
Sbjct: 190 EIRFAFHCLEQLLVYPSKVEKQIWHFVKELFIYRKIACPDQKVRLKTLGIPSGSCFTNIV 249

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPA 323
           GSI+N +RI++++  L  R P + YT GDDSL G   ++Y     L    +  NW LN  
Sbjct: 250 GSIVNYVRIQFLFLKLTHR-PAVAYTHGDDSLAGVDATQYIQLSILQAECDQYNWQLNGL 308

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+  S   E   FL RT   G N RD   CLR+L +PEYPV  G IS  RA SIA+D+G 
Sbjct: 309 KSLISTVAEQTVFLSRTVKEGQNFRDTLTCLRMLKYPEYPVPCGSISTLRAFSIAKDSGL 368

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
           +S +L  I + L  KYG+A++
Sbjct: 369 SSALLTQIYQYLESKYGMAQS 389


>gb|ABV89762.1| putative RNA-dependent RNA polymerase [Rosa multiflora cryptic
           virus]
          Length = 479

 Score =  149 bits (375), Expect = 1e-33
 Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           E+  AF +LE I+ FP+S   + ++    LFI++KIAAP+GK Y    GIPSGS FT+II
Sbjct: 254 ELRFAFGLLESILIFPSSVEHQVWQFIIELFIYRKIAAPNGKIYLKTLGIPSGSCFTNII 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPA 323
           GSI+N +RI+Y++  L  R  +  +T GDDSL+G   ++Y   E+   I +   W +N A
Sbjct: 314 GSIVNYVRIQYMFFRLT-REFVTAFTHGDDSLVGVPTTQYVQMENFKPICDENLWTINIA 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+  SR  E V+FL R      + RD   CLR+L FPEY VETG +S  RA SI +DAG 
Sbjct: 373 KSAISREAEGVSFLSRKVREMCHARDELICLRMLKFPEYIVETGAMSTLRAFSIHKDAGI 432

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
            S  L  I K L  +YG A++
Sbjct: 433 NSRYLYQIYKFLLHRYGKADS 453


>gb|ABY60412.1| RNA dependent RNA polymerase [Rose cryptic virus 1]
          Length = 282

 Score =  149 bits (375), Expect = 1e-33
 Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           E+  AF +LE I+ FP+S   + ++    LFI++KIAAP+GK Y    GIPSGS FT+II
Sbjct: 57  ELRFAFGLLESILIFPSSVEHQVWQFIIELFIYRKIAAPNGKIYLKTLGIPSGSCFTNII 116

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPA 323
           GSI+N +RI+Y++  L  R  +  +T GDDSL+G   ++Y   E+   I +   W +N A
Sbjct: 117 GSIVNYVRIQYMFFRLT-REFVTAFTHGDDSLVGVPTTQYVQMENFKPICDENLWTINIA 175

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+  SR  E V+FL R      + RD   CLR+L FPEY VETG +S  RA SI +DAG 
Sbjct: 176 KSAISREAEGVSFLSRKVREMCHARDELICLRMLKFPEYIVETGAMSTLRAFSIHKDAGI 235

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
            S  L  I K L  +YG A++
Sbjct: 236 NSRYLYQIYKFLLHRYGKADS 256


>ref|YP_001686783.1| putative RNA dependent RNA polymerse [Raphanus sativus cryptic
           virus 2] gi|77863174|gb|ABB04855.1| putative RNA
           dependent RNA polymerse [Raphanus sativus cryptic virus
           2]
          Length = 477

 Score =  148 bits (373), Expect = 2e-33
 Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI  AF  LE  + FP++   + +R    LFI++KIAAP+G  +    GIPSGS FT++I
Sbjct: 254 EIRFAFQCLESQLIFPSNVEAQIWRFIVELFIYRKIAAPNGTLFLKTLGIPSGSCFTNMI 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSL--IGESEYTNPEDLAKIAESLNWYLNPA 323
           GS++N +RI+Y+++ L     +  YT GDDSL  +  ++Y   E    I E   W +N  
Sbjct: 314 GSVVNYVRIQYMFKKLTDDF-VEAYTHGDDSLAAVSTAQYIPLEKFGPICEPFMWSINTL 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+E SR     TFL R+     N RD   CLR+L++PEY VE G ISA RA+SI  DAG 
Sbjct: 373 KSEVSREGRLTTFLSRSIRDKQNYRDEFVCLRMLVYPEYEVEDGSISALRAKSIYVDAGI 432

Query: 142 TSEVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
            S+ L  +   L++KYG+  A+ +P  LR +
Sbjct: 433 HSQYLYHVFLYLKQKYGL--ANTLPHNLRTW 461


>ref|YP_001686786.1| RNA-dependent RNA polymerase [Rose cryptic virus 1]
           gi|167077473|gb|ABZ10945.1| RNA-dependent RNA polymerase
           [Rose cryptic virus 1]
          Length = 479

 Score =  148 bits (373), Expect = 2e-33
 Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           E+  AF +LE I+ FP+S   + ++    LFI++KIAAP+GK Y    GIPSGS FT+II
Sbjct: 254 ELRFAFGLLESILIFPSSVEHQVWQFIIELFIYRKIAAPNGKIYLKTLGIPSGSCFTNII 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPA 323
           GSI+N +RI+Y++  L  R  +  +T GDDSL+G   ++Y   E+   I +   W +N A
Sbjct: 314 GSIVNYVRIQYMFFRLT-REFVTAFTHGDDSLVGVPTTQYVQMENFKPICDENLWTINIA 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K+  SR  E V+FL R      + RD   CLR+L FPEY VETG +S  RA SI +DAG 
Sbjct: 373 KSAISREAEGVSFLSRKVREMCHARDELICLRMLKFPEYIVETGAMSTLRAFSIHKDAGI 432

Query: 142 TSEVLNTIAKRLRRKYGIAEA 80
            S  L  I K L  +YG A++
Sbjct: 433 HSRYLYQIYKFLLHRYGKADS 453


>gb|ABC96789.2| RNA-dependent RNA polymerase-like protein [Pepper cryptic virus 1]
          Length = 311

 Score =  147 bits (372), Expect = 2e-33
 Identities = 67/111 (60%), Positives = 85/111 (76%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EIHAAFDI++  ++FPN ET + F I R LFIHKK+AAPDG  Y SHKGIPSGSY+TS++
Sbjct: 201 EIHAAFDIIKSYVDFPNYETEQAFEITRQLFIHKKVAAPDGYIYESHKGIPSGSYYTSLV 260

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESL 344
           GSIIN LRI Y+WR+L G  P  C+T GDDSL+G++ Y NP+ + + A  L
Sbjct: 261 GSIINYLRINYLWRLLTGHPPQQCHTLGDDSLVGDNSYVNPQAIEEAANKL 311


>ref|YP_004429258.1| RNA-dependent RNA polymerase [Fig cryptic virus]
           gi|332163669|emb|CBW77436.1| RNA-dependent RNA
           polymerase [Fig cryptic virus]
          Length = 472

 Score =  144 bits (362), Expect = 3e-32
 Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
 Frame = -2

Query: 676 EIHAAFDILEKIIEFPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSII 497
           EI  AF+ +++++ FP   +   F   R  F  +K+A P+G  +    GIPSGSY+T+II
Sbjct: 254 EIDHAFNCIQQLLAFPTELSRLAFLFTRESFKQRKLADPNGILWMRKGGIPSGSYYTNII 313

Query: 496 GSIINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPE--DLAKIAESLNWYLNPA 323
           GS+IN  RIEY+ + L G     CY QGDDSLI  +    P+   L  + E   W LN  
Sbjct: 314 GSVINYNRIEYVCKRL-GLQKTSCYVQGDDSLIHITGDAKPDLTQLQMLGEQFGWTLNIP 372

Query: 322 KTETSRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEYPVETGRISAFRARSIAQDAGH 143
           K   ++  + VTFLGR+    LN R+  + LRL+ FPEY VE  +IS  R ++IA+DAG 
Sbjct: 373 KCSLTQDSQLVTFLGRSQMHQLNIRERLKVLRLMCFPEYKVEDPKISTTRVKAIARDAGW 432

Query: 142 TSEVLNTIAKRLRRKYGIAEASEVPRYLRPY 50
           +  V N I  +L+R YG  E   +P +L  +
Sbjct: 433 SDPVYNKIYLQLKRLYG--EVERLPPHLATF 461