BLASTX nr result
ID: Paeonia23_contig00012069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00012069
(452 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus... 88 1e-15
ref|XP_002284465.1| PREDICTED: general transcription factor IIH ... 88 1e-15
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ... 87 2e-15
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ... 87 2e-15
ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, par... 87 2e-15
ref|XP_002307429.2| basal transcription factor complex subunit-r... 87 2e-15
ref|XP_007019037.1| Basal transcription factor complex subunit-r... 86 5e-15
ref|XP_007019036.1| Basal transcription factor complex subunit-r... 86 5e-15
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ... 85 9e-15
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ... 85 9e-15
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun... 85 1e-14
ref|XP_002532948.1| RNA polymerase II transcription factor B sub... 76 5e-12
ref|XP_004170865.1| PREDICTED: general transcription factor IIH ... 75 9e-12
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ... 75 9e-12
gb|AAF25986.1|AC013354_5 F15H18.15 [Arabidopsis thaliana] 74 2e-11
ref|NP_564050.1| basal transcription factor complex subunit-rela... 74 2e-11
ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr... 73 4e-11
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab... 73 5e-11
ref|XP_006828057.1| hypothetical protein AMTR_s00008p00264310, p... 71 1e-10
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ... 71 2e-10
>gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus notabilis]
Length = 236
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQV VIATGYNSCDYI++ ENG+MPALCS +LQKLEEFV +D
Sbjct: 46 NSILLLNQLNQVAVIATGYNSCDYIFD-SSVSTSRGLENGRMPALCSNLLQKLEEFVVRD 104
Query: 79 KQLSKE 62
+QL KE
Sbjct: 105 EQLCKE 110
>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
product [Vitis vinifera]
Length = 297
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/86 (54%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILL+NQ NQVVVIATG NSC++I++ ENG+MPALCS +LQKLEEFV D
Sbjct: 46 NSILLINQLNQVVVIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGD 105
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
++LSKE SMALC
Sbjct: 106 EKLSKEVLAAGIGSSLLSGSLSMALC 131
>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X2 [Citrus sinensis]
Length = 293
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
N+IL LNQ NQVVVIATGYNSCDY+Y+ NG+MP+LC+ +LQ LEEF+NKD
Sbjct: 46 NAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVG-NGRMPSLCATLLQNLEEFMNKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL K++ SMALC
Sbjct: 105 EQLGKQEPEGRIACSLLSGSLSMALC 130
>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
X1 [Citrus sinensis]
Length = 298
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
N+IL LNQ NQVVVIATGYNSCDY+Y+ NG+MP+LC+ +LQ LEEF+NKD
Sbjct: 46 NAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVG-NGRMPSLCATLLQNLEEFMNKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL K++ SMALC
Sbjct: 105 EQLGKQEPEGRIACSLLSGSLSMALC 130
>ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, partial [Citrus
clementina] gi|557536296|gb|ESR47414.1| hypothetical
protein CICLE_v100020021mg, partial [Citrus clementina]
Length = 174
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
N+IL LNQ NQVVVIATGYNSCDY+Y+ NG+MP+LC+ +LQ LEEF+NKD
Sbjct: 46 NAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVG-NGRMPSLCATLLQNLEEFMNKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL K++ SMALC
Sbjct: 105 EQLGKQEPEGRIACSLLSGSLSMALC 130
>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
[Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
transcription factor complex subunit-related family
protein [Populus trichocarpa]
Length = 298
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIA+GYN+CDYIY+ SE+G+MP+L S +LQKLEEF+ KD
Sbjct: 47 NSILLLNQLNQVVVIASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKD 106
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
++L KE SMALC
Sbjct: 107 EKLGKEQSQRAIKSSLLSGSLSMALC 132
>ref|XP_007019037.1| Basal transcription factor complex subunit-related isoform 2
[Theobroma cacao] gi|508724365|gb|EOY16262.1| Basal
transcription factor complex subunit-related isoform 2
[Theobroma cacao]
Length = 274
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/86 (54%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
N+IL LNQ NQVVVIATGYNSC+YI++ ENG+MP +CS +LQKLEEF+ KD
Sbjct: 46 NAILTLNQLNQVVVIATGYNSCNYIFD-SSSDLNQSFENGRMPVMCSSLLQKLEEFLIKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QLSKE SMALC
Sbjct: 105 EQLSKEVPEGRIKSSLLSGSLSMALC 130
>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
[Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
transcription factor complex subunit-related isoform 1
[Theobroma cacao]
Length = 296
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/86 (54%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
N+IL LNQ NQVVVIATGYNSC+YI++ ENG+MP +CS +LQKLEEF+ KD
Sbjct: 46 NAILTLNQLNQVVVIATGYNSCNYIFD-SSSDLNQSFENGRMPVMCSSLLQKLEEFLIKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QLSKE SMALC
Sbjct: 105 EQLSKEVPEGRIKSSLLSGSLSMALC 130
>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
2 [Fragaria vesca subsp. vesca]
Length = 298
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/86 (56%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIATGY+SC YIY+ S+ G+MPALCS +L+KLEEFV KD
Sbjct: 46 NSILLLNQLNQVVVIATGYSSCSYIYD-SASAPGQGSDQGRMPALCSHLLKKLEEFVAKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL KE SMALC
Sbjct: 105 EQLLKEGSAEGIPSSLLSGSLSMALC 130
>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
1 [Fragaria vesca subsp. vesca]
Length = 300
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/86 (56%), Positives = 56/86 (65%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIATGY+SC YIY+ S+ G+MPALCS +L+KLEEFV KD
Sbjct: 46 NSILLLNQLNQVVVIATGYSSCSYIYD-SASAPGQGSDQGRMPALCSHLLKKLEEFVAKD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL KE SMALC
Sbjct: 105 EQLLKEGSAEGIPSSLLSGSLSMALC 130
>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
gi|462420187|gb|EMJ24450.1| hypothetical protein
PRUPE_ppa009386mg [Prunus persica]
Length = 295
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/86 (56%), Positives = 55/86 (63%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIATGYNSC YIY+ S+NG+MPA C +LQKLEEFV +D
Sbjct: 46 NSILLLNQLNQVVVIATGYNSCSYIYD-SSTSTNQGSDNGRMPARCVNLLQKLEEFVIED 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+QL KE SMALC
Sbjct: 105 EQLIKEGLREGIASSLLSGSLSMALC 130
>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
transcription factor B subunit, putative [Ricinus
communis]
Length = 266
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIA GYNSCDYIY+ E G++PAL S +LQKLE+F+ +D
Sbjct: 46 NSILLLNQLNQVVVIANGYNSCDYIYDSSLVMNHSSDE-GRIPALYSDLLQKLEDFMIRD 104
Query: 79 KQLSK-EDXXXXXXXXXXXXXXSMALC 2
++L K E+ SMALC
Sbjct: 105 EKLGKGEESKRKIASSLLSGSLSMALC 131
>ref|XP_004170865.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
sativus]
Length = 187
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/86 (48%), Positives = 52/86 (60%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSIL+LNQ N+VVVI TGY SC Y+Y E+G+MPALC+++L+ LEEFV D
Sbjct: 46 NSILVLNQLNEVVVIGTGYASCKYLYN-SSSYSNHGLEDGRMPALCTRLLKNLEEFVIGD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+Q KED SMALC
Sbjct: 105 EQSIKEDPKGGTMSSLLSGSLSMALC 130
>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
sativus]
Length = 295
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/86 (48%), Positives = 52/86 (60%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSIL+LNQ N+VVVI TGY SC Y+Y E+G+MPALC+++L+ LEEFV D
Sbjct: 46 NSILVLNQLNEVVVIGTGYASCKYLYN-SSSYSNHGLEDGRMPALCTRLLKNLEEFVIGD 104
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+Q KED SMALC
Sbjct: 105 EQSIKEDPKGGTMSSLLSGSLSMALC 130
>gb|AAF25986.1|AC013354_5 F15H18.15 [Arabidopsis thaliana]
Length = 590
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSE-NGK-MPALCSKVLQKLEEFVN 86
N++L LNQ NQVVVIATGY+SCDYIY+ E NG MPA+ +L+KLEEFV
Sbjct: 54 NAVLGLNQLNQVVVIATGYSSCDYIYDSSLTSNHGNFESNGTGMPAIFGSLLKKLEEFVT 113
Query: 85 KDKQLSKED 59
KD++LSKE+
Sbjct: 114 KDEELSKEE 122
>ref|NP_564050.1| basal transcription factor complex subunit-related protein
[Arabidopsis thaliana] gi|21537277|gb|AAM61618.1|
unknown [Arabidopsis thaliana]
gi|92856638|gb|ABE77412.1| At1g18340 [Arabidopsis
thaliana] gi|332191584|gb|AEE29705.1| basal
transcription factor complex subunit-related protein
[Arabidopsis thaliana]
Length = 301
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSE-NGK-MPALCSKVLQKLEEFVN 86
N++L LNQ NQVVVIATGY+SCDYIY+ E NG MPA+ +L+KLEEFV
Sbjct: 46 NAVLGLNQLNQVVVIATGYSSCDYIYDSSLTSNHGNFESNGTGMPAIFGSLLKKLEEFVT 105
Query: 85 KDKQLSKED 59
KD++LSKE+
Sbjct: 106 KDEELSKEE 114
>ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum]
gi|557094384|gb|ESQ34966.1| hypothetical protein
EUTSA_v10008316mg [Eutrema salsugineum]
Length = 300
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGK-MPALCSKVLQKLEEFVNK 83
N++L LNQ NQVVVIATGY+SCDYIY+ +G MPAL +L+KLE+F K
Sbjct: 46 NAVLGLNQLNQVVVIATGYSSCDYIYDSSLTPNGNFESSGSGMPALFGSLLEKLEDFAAK 105
Query: 82 DKQLSKED 59
D++LSKE+
Sbjct: 106 DEELSKEE 113
>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 72.8 bits (177), Expect = 5e-11
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSE-NGK-MPALCSKVLQKLEEFVN 86
N++L LNQ NQVVVIATGY+SCDYIY+ E NG MPAL +L+KLE+FV
Sbjct: 46 NAVLGLNQLNQVVVIATGYSSCDYIYDSSLTSNHGNLESNGTGMPALFGSLLKKLEDFVT 105
Query: 85 KDKQLSKED 59
KD++LS+E+
Sbjct: 106 KDEELSREE 114
>ref|XP_006828057.1| hypothetical protein AMTR_s00008p00264310, partial [Amborella
trichopoda] gi|548832692|gb|ERM95473.1| hypothetical
protein AMTR_s00008p00264310, partial [Amborella
trichopoda]
Length = 277
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGK-MPALCSKVLQKLEEFVNK 83
NSILLLNQ NQ+VVIATG NSCDY+Y+ + K +P ++LQKLE+F+ K
Sbjct: 48 NSILLLNQLNQLVVIATGVNSCDYLYDSSRVGHESEKRSTKGIPGHSLEILQKLEDFIAK 107
Query: 82 DKQLSKEDXXXXXXXXXXXXXXSMALC 2
D+QLS D S+ALC
Sbjct: 108 DQQLSNSDEAPGKICSLLSGSLSLALC 134
>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
tuberosum]
Length = 290
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/86 (50%), Positives = 53/86 (61%)
Frame = -2
Query: 259 NSILLLNQFNQVVVIATGYNSCDYIYEXXXXXXXXXSENGKMPALCSKVLQKLEEFVNKD 80
NSILLLNQ NQVVVIATGYNSCDY+++ S + A C +L+KLE+FV+KD
Sbjct: 49 NSILLLNQMNQVVVIATGYNSCDYVFD--------SSTSSMQRAEC--LLEKLEDFVDKD 98
Query: 79 KQLSKEDXXXXXXXXXXXXXXSMALC 2
+ LS+ED SMALC
Sbjct: 99 ESLSQEDSVDGVGFSLLSGSLSMALC 124