BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00011923
         (1536 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...   236   2e-59
ref|XP_007046905.1| Basic helix-loop-helix DNA-binding superfami...   236   3e-59
emb|CBI17503.3| unnamed protein product [Vitis vinifera]              233   2e-58
ref|XP_007199864.1| hypothetical protein PRUPE_ppa005829mg [Prun...   230   1e-57
ref|XP_004289668.1| PREDICTED: transcription factor bHLH63-like ...   229   3e-57
ref|XP_007046906.1| Basic helix-loop-helix DNA-binding superfami...   228   7e-57
ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like ...   223   2e-55
emb|CBI37656.3| unnamed protein product [Vitis vinifera]              218   6e-54
gb|EXB37137.1| hypothetical protein L484_018560 [Morus notabilis]     214   8e-53
ref|XP_002313791.1| basic helix-loop-helix family protein [Popul...   214   8e-53
ref|XP_002313497.2| hypothetical protein POPTR_0009s12000g [Popu...   214   1e-52
ref|XP_007042169.1| Cryptochrome-interacting basic-helix-loop-he...   210   2e-51
ref|XP_006283943.1| hypothetical protein CARUB_v10005062mg [Caps...   206   2e-50
ref|XP_002305434.2| hypothetical protein POPTR_0004s16330g [Popu...   205   4e-50
ref|XP_007042171.1| Cryptochrome-interacting basic-helix-loop-he...   204   7e-50
ref|XP_007042170.1| Cryptochrome-interacting basic-helix-loop-he...   204   7e-50
ref|XP_002310242.2| hypothetical protein POPTR_0007s13020g [Popu...   201   6e-49
ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   200   1e-48
ref|XP_007046908.1| Basic helix-loop-helix DNA-binding superfami...   197   5e-48
ref|NP_195179.2| cryptochrome-interacting basic-helix-loop-helix...   197   8e-48

>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score =  236 bits (602), Expect = 2e-59
 Identities = 173/427 (40%), Positives = 211/427 (49%), Gaps = 112/427 (26%)
 Frame = +3

Query: 303  SAEMLQYCIQSGENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPM-- 476
            S EML +C+ +  N +GN T+MTV ERQRVR+ W                F  +   M  
Sbjct: 6    SPEML-HCLSTSGNVAGNGTDMTVFERQRVRMKWQQEQFQQQQQQQQQSYFGGNEFSMFS 64

Query: 477  ---EFYQTPLFHSLVNND------------------------FYNLPIPKAEFVRDEMGF 575
               +  Q   FH L+N D                        F  L +P   F  +  GF
Sbjct: 65   MGGQVGQAQQFHGLINGDSAGVGDLLGRAVKADPGLENVWPEFGKLTMPGTGFNVENAGF 124

Query: 576  ATN------------------------SHEKGGDSGLTEKAASTTGRENLKKRKAEKEFA 683
             +                         +  K  +S L EK AS  GRE+ KKRKA+K  +
Sbjct: 125  ESAGILNCSGFEMNHTTSRTSSCPLAAAEAKVRESVLPEKIASAVGRESFKKRKADKVQS 184

Query: 684  ------DGPENKRIRNDTEEVQSKITE-----NSTTCMEN-------------------- 770
                  +  ++KRI+   E+ +SKITE     NSTT                        
Sbjct: 185  PKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATTTTTNNNNRETSADTSK 244

Query: 771  -SKVQRTDFIHVRARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDE 947
             S+VQ+ D+IHVRARRGQATDSHSLAER RREKI ++MK LQDLVPGC KITGKAGMLDE
Sbjct: 245  VSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 304

Query: 948  IINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE-FPAYVAGFPTTTSPSTGVSNLG 1124
            IINYVQSLQRQVEFLSMKLAA NPR DFNIDNF+AKE FPA  A FP T   S+ ++N  
Sbjct: 305  IINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFP-TIGMSSEMTNPS 363

Query: 1125 YLQFNPMQQGTTSS--------------------SIPNP------EQVPPFPAMDTGLQS 1226
            YL ++P+QQ  T                      SIP+        Q+ P    D  LQ+
Sbjct: 364  YLHYDPIQQVATCGVEMGINPAEIALRRTISAPVSIPDTFLDSCFTQIQPSSTWDADLQN 423

Query: 1227 LYNVEFH 1247
            LY  EFH
Sbjct: 424  LYGPEFH 430


>ref|XP_007046905.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 1 [Theobroma cacao] gi|508699166|gb|EOX91062.1|
            Basic helix-loop-helix DNA-binding superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 385

 Score =  236 bits (601), Expect = 3e-59
 Identities = 163/392 (41%), Positives = 200/392 (51%), Gaps = 85/392 (21%)
 Frame = +3

Query: 327  IQSGENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPMEFYQT--PLF 500
            + S E  + N  +MTVLERQ+ RL W                 V +NNP+E   +  P  
Sbjct: 5    LHSLETCTYNGMDMTVLERQQARLKWQQQQNYG----------VQNNNPIELCASSVPQI 54

Query: 501  HSLVNNDF-----------------------YNLPIPKAEFVRDEM-------------- 569
               + + F                        NL +   EF   +M              
Sbjct: 55   QGFLGSSFGSGQLVEMKKPEVYLGSDDFPKFVNLSVAGPEFSASKMDLVPPEAAADYCIS 114

Query: 570  --------GFATNSHEKGGDSGLTEKAASTTGRENLKKRKAEKEFADGPENKRIRNDTEE 725
                     F T    +  +  + +K  STTGRE+  KRK E    D  ++KRI+ + E 
Sbjct: 115  RTSSCQMTAFQTAVMNEEREDVILKKMESTTGRESFNKRKVEAVQDDKCKDKRIKGEVEG 174

Query: 726  VQSKITENSTTCMENS--------KVQRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                 T+ ST    NS        +VQ+ D+IHVRARRGQATDSHSLAERARREKI KKM
Sbjct: 175  ESEVKTKCSTEVSRNSSKGNSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISKKM 234

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKEF 1061
            KCLQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NP  +FN+DN  AKEF
Sbjct: 235  KCLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPSVEFNVDNLPAKEF 294

Query: 1062 PAYVAGFPTTTSPSTGVSNLGYLQFNPMQ------------------QGTTSSSIPNPE- 1184
            PAYVA FP   + S  ++NL  LQFNP+Q                  +G  S+SI  PE 
Sbjct: 295  PAYVANFP-AAAKSPAMANLACLQFNPLQKAVSCMLDATGHPPQTATEGIASASISIPEQ 353

Query: 1185 --------QVPPFPAMDT---GLQSLYNVEFH 1247
                    Q+ PF   +T   GL ++YN+ FH
Sbjct: 354  ALSSSCITQLQPFSTWNTDPQGLYNVYNMGFH 385


>emb|CBI17503.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  233 bits (593), Expect = 2e-58
 Identities = 137/235 (58%), Positives = 158/235 (67%), Gaps = 33/235 (14%)
 Frame = +3

Query: 639  GRENLKKRKAEKEFADGPENKRIRNDTEEVQSKITENSTTCMEN-SKVQ---RTDFIHVR 806
            GR ++KKRKAE    +  ++++I+ D EE +SKI E  +    N SKV    + D+IHVR
Sbjct: 132  GRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKPDYIHVR 191

Query: 807  ARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVE 986
            ARRGQATDSHSLAERARREKI KKMK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVE
Sbjct: 192  ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251

Query: 987  FLSMKLAAFNPRPDFNIDNFIAKEFPAYV-AGFPTTTSPSTGVSNLGYLQFNPMQQG--- 1154
            FLS+KLA  NPR DFN+D F+ KEFPAYV AGFPT  + S+ ++NL +LQF P+ QG   
Sbjct: 252  FLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGFPTAAA-SSEMANLPFLQFQPVPQGITS 310

Query: 1155 ----------------TTSSSIPNPE---------QVPPFPAMDTGLQSLYNVEF 1244
                            TTSSS   PE         QV PF   DT LQSLY  EF
Sbjct: 311  CELHMPIDPPQSALQMTTSSSTSVPEMFTNSTSFSQVQPFTTWDTDLQSLYTGEF 365


>ref|XP_007199864.1| hypothetical protein PRUPE_ppa005829mg [Prunus persica]
            gi|462395264|gb|EMJ01063.1| hypothetical protein
            PRUPE_ppa005829mg [Prunus persica]
          Length = 441

 Score =  230 bits (587), Expect = 1e-57
 Identities = 170/410 (41%), Positives = 208/410 (50%), Gaps = 98/410 (23%)
 Frame = +3

Query: 309  EMLQYCIQSGENYSGNDTEMTVLERQRVRLMW-LXXXXXXXXXXXXXXNFVIHNN----- 470
            EML      G   +GN T+MTVLERQR R+ W L               +    N     
Sbjct: 7    EMLNCMNAPGTFLAGNCTDMTVLERQRARMKWHLHEHNDPIQLHQQQQGYNFSGNELSGV 66

Query: 471  ---PMEFYQTPLFHSLVNNDFYNLPIPKAEFVRDEMGFAT-------------------- 581
               P+   Q   F  LV  D    P P +E    E+G+ +                    
Sbjct: 67   FSVPIPAGQAQGFMGLVCGDSAVKPDPCSENRWAELGYGSCGLVVNNNGAAGFEEMINGR 126

Query: 582  --NSH--------------EKGGDSGLTEKAASTTGRENLKKRKAEKEFA-------DGP 692
              NS+              +K  D+ L++K +  TG+E+ KKRKA+K  +       D  
Sbjct: 127  NNNSNISRTFSCPPTVAAEKKSNDAVLSQKISLPTGKESFKKRKADKVQSNKAVAAEDDS 186

Query: 693  ENKRIRNDTEEVQSKITENSTT--------------CMENSK---VQRTDFIHVRARRGQ 821
              KR++   EE  SKITE ++T                +NSK   VQ+ D+IHVRARRGQ
Sbjct: 187  TEKRMKGCAEEGDSKITEQTSTKNNTNNDRESSGDTSKDNSKASEVQKPDYIHVRARRGQ 246

Query: 822  ATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMK 1001
            ATDSHSLAER RREKI ++MK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMK
Sbjct: 247  ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 306

Query: 1002 LAAFNPRPDFNIDNFIAKE-FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQQ--------- 1151
            LAA NPR DFNID+  AKE FPA  A FP T   S+ ++N  Y+QFNP+QQ         
Sbjct: 307  LAAVNPRLDFNIDDLFAKEMFPACAANFP-TIGMSSEMTNSAYVQFNPVQQMVSSCGLDM 365

Query: 1152 ----------GTTSSSIPNPE---------QVPPFPAMDTGLQSLYNVEF 1244
                       T S+ +  PE         Q PP    D  LQ+L+NVEF
Sbjct: 366  GINSSDLALRRTISAPVSIPETFLDTSCFTQAPPTAIWDADLQNLFNVEF 415


>ref|XP_004289668.1| PREDICTED: transcription factor bHLH63-like [Fragaria vesca subsp.
            vesca]
          Length = 422

 Score =  229 bits (584), Expect = 3e-57
 Identities = 164/391 (41%), Positives = 204/391 (52%), Gaps = 78/391 (19%)
 Frame = +3

Query: 309  EMLQYCIQSGENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNF---VIHNNPME 479
            EML      G   +GN T+MTVL+RQR R+ W               N    V  + P++
Sbjct: 7    EMLNCMNAPGSLVAGNCTDMTVLDRQRARMKWQQDQFQQQQQGYFGGNELNGVFSHMPIQ 66

Query: 480  FYQTPLFHSLVN--NDFYN----LPIPKAEFVRDEMGFATNSHE---------------- 593
              Q   F  L+    D        P P +E    E+G+ +   E                
Sbjct: 67   ASQVQSFQGLIGLGGDLGMGQAVKPDPSSENGWTELGYGSCGFEMNNIARTFSCPPKVAA 126

Query: 594  --KGGDSGLTEKAASTTGRENLKKRKAEKEF------ADGPENKRIRNDTEEVQSKITEN 749
              K  ++  + K +S  G+E+ KKRKA+K         D   +KR++   EE  SKITE 
Sbjct: 127  ETKSNNAVASPKISSPAGKESFKKRKADKAQNNKAVGEDDSSDKRMKGCAEEGDSKITEQ 186

Query: 750  ST-----------TCMENSK---VQRTDFIHVRARRGQATDSHSLAERARREKIGKKMKC 887
            ++           T   NSK   VQ+ D+IHVRARRGQATDSHSLAER RREKI ++MK 
Sbjct: 187  NSPKNNDRESSADTSKGNSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKY 246

Query: 888  LQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE-FP 1064
            LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFNID+ I KE FP
Sbjct: 247  LQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDDLITKEMFP 306

Query: 1065 AYVAGFPTTTSPSTGVSNLGYLQFNPMQQ-----GTTSSSIPNPE--------------- 1184
            A +  FP T   S+ +++  YLQFN +QQ     G  SS I +P+               
Sbjct: 307  ANMVNFP-TIGMSSEMTSSAYLQFNHVQQLLQCSGLESSGISSPDSTLLRRSFSTPVSVP 365

Query: 1185 ----------QVPPFPAMDTGLQSLYNVEFH 1247
                      QV P    D  +Q+L+NVEFH
Sbjct: 366  ETFADTSCFTQVQPPTTWDADMQNLFNVEFH 396


>ref|XP_007046906.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 2 [Theobroma cacao] gi|508699167|gb|EOX91063.1|
            Basic helix-loop-helix DNA-binding superfamily protein,
            putative isoform 2 [Theobroma cacao]
          Length = 382

 Score =  228 bits (580), Expect = 7e-57
 Identities = 161/391 (41%), Positives = 198/391 (50%), Gaps = 84/391 (21%)
 Frame = +3

Query: 327  IQSGENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPMEFYQT--PLF 500
            + S E  + N  +MTVLERQ+ RL W                 V +NNP+E   +  P  
Sbjct: 5    LHSLETCTYNGMDMTVLERQQARLKWQQQQNYG----------VQNNNPIELCASSVPQI 54

Query: 501  HSLVNNDF-----------------------YNLPIPKAEFVRDEM-------------- 569
               + + F                        NL +   EF   +M              
Sbjct: 55   QGFLGSSFGSGQLVEMKKPEVYLGSDDFPKFVNLSVAGPEFSASKMDLVPPEAAADYCIS 114

Query: 570  --------GFATNSHEKGGDSGLTEKAASTTGRENLKKRKAEKEFADGPENKRIRNDTEE 725
                     F T    +  +  + +K  STTGRE+  KRK E    D  ++KRI+ + E 
Sbjct: 115  RTSSCQMTAFQTAVMNEEREDVILKKMESTTGRESFNKRKVEAVQDDKCKDKRIKGEVEG 174

Query: 726  VQSKITENSTTCMENS--------KVQRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                 T+ ST    NS        +VQ+ D+IHVRARRGQATDSHSLAERARREKI KKM
Sbjct: 175  ESEVKTKCSTEVSRNSSKGNSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISKKM 234

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKEF 1061
            KCLQDLVPGC KITGKAGMLDEIINYVQSLQRQ  FLSMKLAA NP  +FN+DN  AKEF
Sbjct: 235  KCLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ--FLSMKLAAVNPSVEFNVDNLPAKEF 292

Query: 1062 PAYVAGFPTTTSPSTGVSNLGYLQFNPMQ------------------QGTTSSSIPNPEQ 1187
            PAYVA FP   + S  ++NL  LQFNP+Q                  +G  S+SI  PEQ
Sbjct: 293  PAYVANFP-AAAKSPAMANLACLQFNPLQKAVSCMLDATGHPPQTATEGIASASISIPEQ 351

Query: 1188 --------VPPFPAMDT---GLQSLYNVEFH 1247
                    + PF   +T   GL ++YN+ FH
Sbjct: 352  ALSSSCITLQPFSTWNTDPQGLYNVYNMGFH 382


>ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
          Length = 362

 Score =  223 bits (567), Expect = 2e-55
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 5/190 (2%)
 Frame = +3

Query: 639  GRENLKKRKAEKEFADGPENKRIRNDTEEVQSKITENSTTCMEN-SKVQ---RTDFIHVR 806
            GR ++KKRKAE    +  ++++I+ D EE +SKI E  +    N SKV    + D+IHVR
Sbjct: 132  GRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKPDYIHVR 191

Query: 807  ARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVE 986
            ARRGQATDSHSLAERARREKI KKMK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVE
Sbjct: 192  ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251

Query: 987  FLSMKLAAFNPRPDFNIDNFIAKEFPAYV-AGFPTTTSPSTGVSNLGYLQFNPMQQGTTS 1163
            FLS+KLA  NPR DFN+D F+ KEFPAYV AGFPT  + S+ ++NL +LQF P+ QG TS
Sbjct: 252  FLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGFPTAAA-SSEMANLPFLQFQPVPQGITS 310

Query: 1164 SSIPNPEQVP 1193
              +  P   P
Sbjct: 311  CELHMPIDPP 320


>emb|CBI37656.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  218 bits (555), Expect = 6e-54
 Identities = 139/274 (50%), Positives = 164/274 (59%), Gaps = 59/274 (21%)
 Frame = +3

Query: 603  DSGLTEKAASTTGRENLKKRKAEKEFA------DGPENKRIRNDTEEVQSKITE-----N 749
            +S L EK AS  GRE+ KKRKA+K  +      +  ++KRI+   E+ +SKITE     N
Sbjct: 47   ESVLPEKIASAVGRESFKKRKADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKN 106

Query: 750  STTCMEN---------------------SKVQRTDFIHVRARRGQATDSHSLAERARREK 866
            STT                         S+VQ+ D+IHVRARRGQATDSHSLAER RREK
Sbjct: 107  STTTTTTTATTTTTNNNNRETSADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREK 166

Query: 867  IGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNF 1046
            I ++MK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFNIDNF
Sbjct: 167  ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNF 226

Query: 1047 IAKE-FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQQGTTSS------------------- 1166
            +AKE FPA  A FP T   S+ ++N  YL ++P+QQ  T                     
Sbjct: 227  LAKEVFPACAANFP-TIGMSSEMTNPSYLHYDPIQQVATCGVEMGINPAEIALRRTISAP 285

Query: 1167 -SIPNP------EQVPPFPAMDTGLQSLYNVEFH 1247
             SIP+        Q+ P    D  LQ+LY  EFH
Sbjct: 286  VSIPDTFLDSCFTQIQPSSTWDADLQNLYGPEFH 319


>gb|EXB37137.1| hypothetical protein L484_018560 [Morus notabilis]
          Length = 470

 Score =  214 bits (545), Expect = 8e-53
 Identities = 178/447 (39%), Positives = 212/447 (47%), Gaps = 127/447 (28%)
 Frame = +3

Query: 309  EMLQYCIQS-GENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFV--------I 461
            EML +C+ S G   +GN T+MTVL+RQR RL W                +         I
Sbjct: 7    EML-HCLNSVGNLLAGNCTDMTVLDRQRARLKWQQEQLQQEEQQQQQDGYFNGSDQLNGI 65

Query: 462  HNNPMEFYQTPLFHSLVN------NDFYNLPIPK--------AEFVRDEM---GFATNS- 587
              NP +  Q P F  LV       +   N P+          +E  R EM   GF +++ 
Sbjct: 66   FFNPAQAGQFPGFQGLVGGVSVIGDTTANRPVKPDPSLENGWSELDRFEMSGIGFGSSAT 125

Query: 588  -----------------------------HEKGGDSGLTEKAASTTGRENLKKRKAEKEF 680
                                           K  +S   EK +S  GRE+ KKRKA+K  
Sbjct: 126  GLANGPGFQMTGAISRTSSSPPTVAPLTPEVKSRESFSPEKTSSAAGRESFKKRKADKVN 185

Query: 681  ------ADGPENKRIRNDTEEVQSKITENST----------------TCMENSK---VQR 785
                   D    KR +   EE  SKITE ++                T  ENSK   VQ+
Sbjct: 186  NTKGVQEDDSREKRAKGSAEEGDSKITEQNSPKNNNTNANNRESSADTSKENSKASEVQK 245

Query: 786  TDFIHVRARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQ 965
             D+IHVRARRGQATDSHSLAER RREKI ++MK LQDLVPGC KITGKAGMLDEIINYVQ
Sbjct: 246  PDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 305

Query: 966  SLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE----------------FPAYV-AGFPTTT 1094
            SLQRQVEFLSMKLAA NPR DFNID+  AKE                FPA   AG   T 
Sbjct: 306  SLQRQVEFLSMKLAAVNPRLDFNIDDLFAKELLIIVIFLKQITIKQMFPACAGAGGFQTL 365

Query: 1095 SPSTGVSNLGYLQFNPMQQ-------------------GTTSSSIPNPE---------QV 1190
              S  +SN  YLQFNP QQ                    T S+ +  PE         Q+
Sbjct: 366  GMSAEMSNSPYLQFNPAQQVVSCGGLEMGMNSHDMGLRRTISAPVSIPETFLDTSCYTQI 425

Query: 1191 PPFPAMDTGLQSLYNVEFH-*RTSICF 1268
             P    D+ LQ+LY+ EF+  R+SI F
Sbjct: 426  QPPTTWDSELQNLYSTEFNQGRSSIPF 452


>ref|XP_002313791.1| basic helix-loop-helix family protein [Populus trichocarpa]
            gi|222850199|gb|EEE87746.1| basic helix-loop-helix family
            protein [Populus trichocarpa]
          Length = 439

 Score =  214 bits (545), Expect = 8e-53
 Identities = 139/279 (49%), Positives = 162/279 (58%), Gaps = 62/279 (22%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK-------EFADGPENKRIRNDTEEVQSKITE-- 746
            KG +S +++K +S  GRE+ KKRK +        +  +   +KRI+   EE +SKITE  
Sbjct: 136  KGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVDAEEDTRDKRIKGCAEEGESKITEKN 195

Query: 747  -------NSTTCMENS----------------KVQRTDFIHVRARRGQATDSHSLAERAR 857
                   N+T    NS                +VQ+ D+IHVRARRGQATDSHSLAER R
Sbjct: 196  NNKNSRNNNTNKNNNSNKESSAGNSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVR 255

Query: 858  REKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNI 1037
            REKI ++MK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFN 
Sbjct: 256  REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNF 315

Query: 1038 DNFIAKE-FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQQ--------------------G 1154
            DN  A+E FPA    FP T   S+ ++N  YLQFNP QQ                     
Sbjct: 316  DNLFAREAFPACSVNFP-TIGMSSDMTNPAYLQFNPAQQQLVTCCGLDMGTDPPDMGLKR 374

Query: 1155 TTSSSIPNPE---------QVPPFPAMDTGLQSLYNVEF 1244
            TTSS    PE         Q  P PA D  LQ+LYNV F
Sbjct: 375  TTSSPESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAF 413


>ref|XP_002313497.2| hypothetical protein POPTR_0009s12000g [Populus trichocarpa]
            gi|550331556|gb|EEE87452.2| hypothetical protein
            POPTR_0009s12000g [Populus trichocarpa]
          Length = 440

 Score =  214 bits (544), Expect = 1e-52
 Identities = 139/280 (49%), Positives = 162/280 (57%), Gaps = 63/280 (22%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK-------EFADGPENKRIRNDTEEVQSKITE-- 746
            KG +S +++K +S  GRE+ KKRK +        +  +   +KRI+   EE +SKITE  
Sbjct: 136  KGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVDAEEDTRDKRIKGCAEEGESKITEKN 195

Query: 747  -------NSTTCMENS----------------KVQRTDFIHVRARRGQATDSHSLAERAR 857
                   N+T    NS                +VQ+ D+IHVRARRGQATDSHSLAER R
Sbjct: 196  NNKNSRNNNTNKNNNSNKESSAGNSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVR 255

Query: 858  REKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNI 1037
            REKI ++MK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFN 
Sbjct: 256  REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNF 315

Query: 1038 DNFIAKE--FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQQ-------------------- 1151
            DN  A+E  FPA    FP T   S+ ++N  YLQFNP QQ                    
Sbjct: 316  DNLFAREQAFPACSVNFP-TIGMSSDMTNPAYLQFNPAQQQLVTCCGLDMGTDPPDMGLK 374

Query: 1152 GTTSSSIPNPE---------QVPPFPAMDTGLQSLYNVEF 1244
             TTSS    PE         Q  P PA D  LQ+LYNV F
Sbjct: 375  RTTSSPESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAF 414


>ref|XP_007042169.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 1
            [Theobroma cacao] gi|508706104|gb|EOX98000.1|
            Cryptochrome-interacting basic-helix-loop-helix 1,
            putative isoform 1 [Theobroma cacao]
          Length = 440

 Score =  210 bits (534), Expect = 2e-51
 Identities = 135/271 (49%), Positives = 164/271 (60%), Gaps = 54/271 (19%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK----EFADGPENKRIRNDTEEVQSKIT------ 743
            KG +S ++EK  S  GRE+ KKRK +K    +     ++KRI+   EE +SKIT      
Sbjct: 145  KGKESVVSEKIGSAVGRESFKKRKVDKLQNLKVVAEDDSKRIKACAEEGESKITGPNTNK 204

Query: 744  ----------ENST-TCMENSKV---QRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                      E+ST T  ENSKV   Q+ D+IHVRARRGQATDSHSLAER RREKI ++M
Sbjct: 205  SSSNNNNNKKESSTDTSKENSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERM 264

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE- 1058
            K LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFN++N  AKE 
Sbjct: 265  KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVENLFAKEV 324

Query: 1059 FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQ-------------------QGTTSSSIPNP 1181
            FP+    FP T   S+ ++N  YLQ +P+Q                   + T S+ +  P
Sbjct: 325  FPSCTTNFP-TVGMSSEMANPPYLQVSPVQHVVSCCGLEMGMNTPDMAPRRTISAPVSIP 383

Query: 1182 E----------QVPPFPAMDTGLQSLYNVEF 1244
            +          Q+ P    D  LQ+LYNV F
Sbjct: 384  DASFLDSSCFPQIQPSATWDVELQNLYNVAF 414


>ref|XP_006283943.1| hypothetical protein CARUB_v10005062mg [Capsella rubella]
            gi|482552648|gb|EOA16841.1| hypothetical protein
            CARUB_v10005062mg [Capsella rubella]
          Length = 375

 Score =  206 bits (524), Expect = 2e-50
 Identities = 148/344 (43%), Positives = 184/344 (53%), Gaps = 51/344 (14%)
 Frame = +3

Query: 354  NDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPMEFYQTPLFHSLVNNDFYNL 533
            N T+M+VLERQR  L +L              + VI    ++ +        +  D  NL
Sbjct: 55   NCTDMSVLERQRAHLKYLNPGFDSPLAGFFSGSSVIDGGVIDGF--------LGTDGLNL 106

Query: 534  PIPKAEFVRDEMGFATNSHEKGGDSGLTEKAASTTGRENLKKRKAEKEF--ADGPENKRI 707
            P          M +  N+ E  GD  L+    + TG  N KKRK + E    DG +   +
Sbjct: 107  P----------MIYGENTVE--GDPRLSISPETMTGTRNFKKRKFDTETKDCDGKKKMMM 154

Query: 708  RNDTEEVQ----SKITENST------------------TCMENS-----KVQRTDFIHVR 806
                EEV+    SKITE +                   +C  +S     ++Q+TD+IHVR
Sbjct: 155  NRHEEEVEEEEKSKITEQNNGSTKSIKKMKNKAKKEENSCSNDSSKVTKELQKTDYIHVR 214

Query: 807  ARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVE 986
            ARRGQATDSHS+AER RREKI ++MK LQDLVPGC+KITGKAGMLDEIINYVQSLQRQ+E
Sbjct: 215  ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 274

Query: 987  FLSMKLAAFNPRPDFNIDNFIAKEFPAYVAGFPTTTSPS--------------TGVSN-- 1118
            FLSMKLA  NPRPDF+ID+  AKE    VA  P T  PS              +G SN  
Sbjct: 275  FLSMKLAVVNPRPDFDIDDIFAKE----VASTPMTVVPSPEMVNSGYSHEMVNSGYSNEM 330

Query: 1119 --LGYLQFNPMQQGTTSSSIP----NPEQVPPFPAMDTGLQSLY 1232
               GYL FNPMQQ  T++S P    N  Q P     D+ +Q+LY
Sbjct: 331  ASSGYLHFNPMQQVDTTTSDPLSCFNNGQAPSM--WDSHVQNLY 372


>ref|XP_002305434.2| hypothetical protein POPTR_0004s16330g [Populus trichocarpa]
            gi|550341152|gb|EEE85945.2| hypothetical protein
            POPTR_0004s16330g [Populus trichocarpa]
          Length = 413

 Score =  205 bits (522), Expect = 4e-50
 Identities = 129/267 (48%), Positives = 155/267 (58%), Gaps = 50/267 (18%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEKE---------FADGPENKRIRNDTEEVQSKITE 746
            +G +S +++K +S  GRE+ KKRK +K            +   +KRI+   EE +S  +E
Sbjct: 122  RGAESVVSDKISSGVGRESSKKRKFDKVQNNSKLCVVAEEDSRDKRIKGRAEEGESNTSE 181

Query: 747  NSTTCMENS-----------KVQRTDFIHVRARRGQATDSHSLAERARREKIGKKMKCLQ 893
             +     +S           +VQ+ D+IHVRARRGQATDSHSLAER RREKI ++MK LQ
Sbjct: 182  KNNNKSSSSNNNSNEDNNITEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 241

Query: 894  DLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE-FPAY 1070
            DLVPGC  ITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFNIDN  AKE FPA 
Sbjct: 242  DLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKEAFPAC 301

Query: 1071 VAGFPTTTSPSTGVSNLGYLQFNPMQQ--------------------GTTSSSIPNPE-- 1184
               FP     S  ++N  YLQFNP QQ                     TTS+ +  PE  
Sbjct: 302  STNFP-AIGMSPDMTNAAYLQFNPAQQQLVSCCGLDMGINPPDMGLRRTTSTPVSIPETF 360

Query: 1185 -------QVPPFPAMDTGLQSLYNVEF 1244
                   Q+   P  D  L +LYNV F
Sbjct: 361  LDSSCFTQIQAPPTWDADLPNLYNVAF 387


>ref|XP_007042171.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 3
            [Theobroma cacao] gi|508706106|gb|EOX98002.1|
            Cryptochrome-interacting basic-helix-loop-helix 1,
            putative isoform 3 [Theobroma cacao]
          Length = 418

 Score =  204 bits (520), Expect = 7e-50
 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 25/210 (11%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK----EFADGPENKRIRNDTEEVQSKIT------ 743
            KG +S ++EK  S  GRE+ KKRK +K    +     ++KRI+   EE +SKIT      
Sbjct: 145  KGKESVVSEKIGSAVGRESFKKRKVDKLQNLKVVAEDDSKRIKACAEEGESKITGPNTNK 204

Query: 744  ----------ENST-TCMENSKV---QRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                      E+ST T  ENSKV   Q+ D+IHVRARRGQATDSHSLAER RREKI ++M
Sbjct: 205  SSSNNNNNKKESSTDTSKENSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERM 264

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE- 1058
            K LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFN++N  AKE 
Sbjct: 265  KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVENLFAKEV 324

Query: 1059 FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQ 1148
            FP+    FP T   S+ ++N  YLQ +P+Q
Sbjct: 325  FPSCTTNFP-TVGMSSEMANPPYLQVSPVQ 353


>ref|XP_007042170.1| Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform
            2, partial [Theobroma cacao] gi|508706105|gb|EOX98001.1|
            Cryptochrome-interacting basic-helix-loop-helix 1,
            putative isoform 2, partial [Theobroma cacao]
          Length = 408

 Score =  204 bits (520), Expect = 7e-50
 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 25/210 (11%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK----EFADGPENKRIRNDTEEVQSKIT------ 743
            KG +S ++EK  S  GRE+ KKRK +K    +     ++KRI+   EE +SKIT      
Sbjct: 145  KGKESVVSEKIGSAVGRESFKKRKVDKLQNLKVVAEDDSKRIKACAEEGESKITGPNTNK 204

Query: 744  ----------ENST-TCMENSKV---QRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                      E+ST T  ENSKV   Q+ D+IHVRARRGQATDSHSLAER RREKI ++M
Sbjct: 205  SSSNNNNNKKESSTDTSKENSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERM 264

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKE- 1058
            K LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFN++N  AKE 
Sbjct: 265  KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVENLFAKEV 324

Query: 1059 FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQ 1148
            FP+    FP T   S+ ++N  YLQ +P+Q
Sbjct: 325  FPSCTTNFP-TVGMSSEMANPPYLQVSPVQ 353


>ref|XP_002310242.2| hypothetical protein POPTR_0007s13020g [Populus trichocarpa]
            gi|550334769|gb|EEE90692.2| hypothetical protein
            POPTR_0007s13020g [Populus trichocarpa]
          Length = 388

 Score =  201 bits (512), Expect = 6e-49
 Identities = 117/197 (59%), Positives = 138/197 (70%), Gaps = 7/197 (3%)
 Frame = +3

Query: 597  GGDSGLTEKAASTTGR-ENLKKRKAEKEFADGPENK-RIRNDTEEVQSK-----ITENST 755
            G D  L E   S  GR +N  KRKAE   A+  ++K ++  D  +V+ K       ++S 
Sbjct: 143  GEDVTLMENKQSNHGRRDNSNKRKAEFIAAEQSDDKIKLEEDEPKVKEKGSPEISADSSK 202

Query: 756  TCMENSKVQRTDFIHVRARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAG 935
               + S + +TD+IHVRARRGQATDSHSLAERARREKI KKMKCLQDLVPGC KITG+AG
Sbjct: 203  ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAG 262

Query: 936  MLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKEFPAYVAGFPTTTSPSTGVS 1115
            MLDEIINYVQSLQRQVEF+SMKLAA N RPD   DN   KE PAY+A FP  T  ST ++
Sbjct: 263  MLDEIINYVQSLQRQVEFISMKLAAVNRRPD--TDNVSGKESPAYIASFPAATMSST-IA 319

Query: 1116 NLGYLQFNPMQQGTTSS 1166
            NL +LQ N +QQ  TSS
Sbjct: 320  NLPHLQLNLVQQQATSS 336


>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
            gi|223547923|gb|EEF49415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 444

 Score =  200 bits (509), Expect = 1e-48
 Identities = 139/294 (47%), Positives = 161/294 (54%), Gaps = 67/294 (22%)
 Frame = +3

Query: 594  KGGDSGLTEKAASTTGRENLKKRKAEK--------EFADGPENKRIRNDTEEVQSKIT-- 743
            KG +S ++EK     G E+ KKRK +K           D   +KRI+   EE +SK+   
Sbjct: 136  KGRESVVSEKLTCGVGSESTKKRKVDKVQNNTKVVAEDDNCRDKRIKVCAEEGESKMITE 195

Query: 744  ---------------ENST-TCMENSKV---QRTDFIHVRARRGQATDSHSLAERARREK 866
                           ENS  T  +NSKV   Q+ D+IHVRARRGQATDSHSLAER RREK
Sbjct: 196  KNNNNKSSSSKNSNKENSAETSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREK 255

Query: 867  IGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNF 1046
            I ++MK LQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NPR DFNIDN 
Sbjct: 256  ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNL 315

Query: 1047 IAKE-FPAYVAGFPTTTSPSTGVSNLGYLQFNPMQQ------------------------ 1151
            IAKE FP     FP     S+ ++N  YLQFNP+QQ                        
Sbjct: 316  IAKETFPPCPTNFP-AIGLSSDMTNPAYLQFNPVQQQQQQQQQQQLVTCCGLDMGINNPD 374

Query: 1152 ----GTTSSSIPNPE---------QVPPFPAMDTGLQSLYNVEFH*RTSICFCT 1274
                 T S+ +  PE         Q+      D  LQ+LYNV F    S  F T
Sbjct: 375  MGIRRTISAPVSIPESYIDSSCFNQIQSSSTWDADLQNLYNVAFDQGRSTSFPT 428


>ref|XP_007046908.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
            isoform 4 [Theobroma cacao] gi|508699169|gb|EOX91065.1|
            Basic helix-loop-helix DNA-binding superfamily protein,
            putative isoform 4 [Theobroma cacao]
          Length = 314

 Score =  197 bits (502), Expect(2) = 5e-48
 Identities = 131/303 (43%), Positives = 159/303 (52%), Gaps = 55/303 (18%)
 Frame = +3

Query: 327  IQSGENYSGNDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPMEFYQT--PLF 500
            + S E  + N  +MTVLERQ+ RL W                 V +NNP+E   +  P  
Sbjct: 5    LHSLETCTYNGMDMTVLERQQARLKWQQQQNYG----------VQNNNPIELCASSVPQI 54

Query: 501  HSLVNNDF-----------------------YNLPIPKAEFVRDEM-------------- 569
               + + F                        NL +   EF   +M              
Sbjct: 55   QGFLGSSFGSGQLVEMKKPEVYLGSDDFPKFVNLSVAGPEFSASKMDLVPPEAAADYCIS 114

Query: 570  --------GFATNSHEKGGDSGLTEKAASTTGRENLKKRKAEKEFADGPENKRIRNDTEE 725
                     F T    +  +  + +K  STTGRE+  KRK E    D  ++KRI+ + E 
Sbjct: 115  RTSSCQMTAFQTAVMNEEREDVILKKMESTTGRESFNKRKVEAVQDDKCKDKRIKGEVEG 174

Query: 726  VQSKITENSTTCMENS--------KVQRTDFIHVRARRGQATDSHSLAERARREKIGKKM 881
                 T+ ST    NS        +VQ+ D+IHVRARRGQATDSHSLAERARREKI KKM
Sbjct: 175  ESEVKTKCSTEVSRNSSKGNSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISKKM 234

Query: 882  KCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAFNPRPDFNIDNFIAKEF 1061
            KCLQDLVPGC KITGKAGMLDEIINYVQSLQRQVEFLSMKLAA NP  +FN+DN  AKE 
Sbjct: 235  KCLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPSVEFNVDNLPAKEP 294

Query: 1062 PAY 1070
            P++
Sbjct: 295  PSH 297



 Score = 22.3 bits (46), Expect(2) = 5e-48
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 1105 QECRIWVTFSLIPCNK 1152
            Q+  IW  FS IPC +
Sbjct: 298  QQWPIWPAFSSIPCKR 313


>ref|NP_195179.2| cryptochrome-interacting basic-helix-loop-helix 1 [Arabidopsis
            thaliana] gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName:
            Full=Transcription factor bHLH63; AltName: Full=Basic
            helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
            63; AltName: Full=Transcription factor EN 84; AltName:
            Full=bHLH transcription factor bHLH063
            gi|26450757|dbj|BAC42487.1| putative bHLH transcription
            factor bHLH063 [Arabidopsis thaliana]
            gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis
            thaliana] gi|332660989|gb|AEE86389.1|
            cryptochrome-interacting basic-helix-loop-helix 1
            [Arabidopsis thaliana]
          Length = 335

 Score =  197 bits (502), Expect = 8e-48
 Identities = 141/343 (41%), Positives = 179/343 (52%), Gaps = 50/343 (14%)
 Frame = +3

Query: 354  NDTEMTVLERQRVRLMWLXXXXXXXXXXXXXXNFVIHNNPMEFYQTPLFHSLVNNDFYNL 533
            N  +M+VLERQR  L +L              + +I    M+ Y        ++    NL
Sbjct: 12   NFPDMSVLERQRAHLKYLNPTFDSPLAGFFADSSMITGGEMDSY--------LSTAGLNL 63

Query: 534  PIPKAEFVRDEMGFATNSHEKGGDSGLTEKAASTTGRENLKKRKAEKEFADGPENKR--- 704
            P+   E   +            GDS L+    +T G  N KKRK + E  D  E K+   
Sbjct: 64   PMMYGETTVE------------GDSRLSISPETTLGTGNFKKRKFDTETKDCNEKKKKMT 111

Query: 705  -----IRNDTEEVQSKITENSTTCMENSK-----------------------VQRTDFIH 800
                 +  + EE +SKITE +    ++ K                       +++TD+IH
Sbjct: 112  MNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIH 171

Query: 801  VRARRGQATDSHSLAERARREKIGKKMKCLQDLVPGCEKITGKAGMLDEIINYVQSLQRQ 980
            VRARRGQATDSHS+AER RREKI ++MK LQDLVPGC+KITGKAGMLDEIINYVQSLQRQ
Sbjct: 172  VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231

Query: 981  VEFLSMKLAAFNPRPDFNIDNFIAKEFPAYVAGFPTTTSPS-----TGVS---------- 1115
            +EFLSMKLA  NPRPDF++D+  AKE    VA  P T  PS     +G S          
Sbjct: 232  IEFLSMKLAIVNPRPDFDMDDIFAKE----VASTPMTVVPSPEMVLSGYSHEMVHSGYSS 287

Query: 1116 ---NLGYLQFNPMQQGTTSSSIPNPEQVPPFPAM-DTGLQSLY 1232
               N GYL  NPMQQ  TSS   +       P+M D+ +Q+LY
Sbjct: 288  EMVNSGYLHVNPMQQVNTSSDPLSCFNNGEAPSMWDSHVQNLY 330