BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00010714
         (1257 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part...    95   2e-28
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun...    95   2e-28
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part...    95   2e-28
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part...    95   2e-28
ref|XP_007220363.1| hypothetical protein PRUPE_ppa016496mg, part...    80   5e-24
ref|XP_007214321.1| hypothetical protein PRUPE_ppb019697mg [Prun...    88   9e-15
ref|XP_004305946.1| PREDICTED: uncharacterized protein LOC101303...    72   5e-10
gb|AAV35810.1| retrotransposon protein, putative, Ty3-gypsy sub-...    58   2e-07
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part...    42   3e-07
gb|ABG65972.1| retrotransposon protein, putative, Ty3-gypsy subc...    55   3e-07
gb|AAN09859.1| putative polyprotein [Oryza sativa Japonica Group]      55   3e-07
ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781...    50   6e-07
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                          56   2e-06
gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   2e-06
gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subc...    48   2e-06
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]         54   6e-06
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...    55   8e-06
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...    55   8e-06
ref|XP_007019924.1| DNA/RNA polymerases superfamily protein [The...    58   8e-06
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...    53   1e-05

>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
           gi|462398849|gb|EMJ04517.1| hypothetical protein
           PRUPE_ppa019964mg, partial [Prunus persica]
          Length = 1488

 Score = 95.1 bits (235), Expect(2) = 2e-28
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T PHP+ Y L  IQKD  ++++ QC   FAI  +YID+V CEVV L+V  V +G  YL
Sbjct: 422 LETTPHPKPYPLGWIQKDVDLQITKQCTFKFAITNRYIDEVTCEVVPLDVCQVILGSPYL 481

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINAC 673
           WD DA+ ++R  KY  VKDGKE+ INAC
Sbjct: 482 WDRDAIHYRRLRKYRLVKDGKEFHINAC 509



 Score = 59.3 bits (142), Expect(2) = 2e-28
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +3

Query: 183 EEQTRLDNRASRELPPNTKPDESLVLIPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDP 362
           + +  L  + + ELP   +PD +L L+  P  ++D   + ELF V IQV +S+V AIIDP
Sbjct: 346 DRKATLTTQQAEELPELKQPDVTLTLMTRPADIEDTYNREELFHVNIQVKQSVVQAIIDP 405

Query: 363 ASFRRLISEEFVKEM 407
            S + LISE  V+++
Sbjct: 406 GSQKNLISEALVRKV 420



 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
 Frame = +1

Query: 37  SKSVEKHEKQDK----EEGSMGKNYCKHCDNNRHMKRMCWVLHPEVR-----SN*SVGKN 189
           SK V K + Q K    +EG   K YC HC  +RH K  CW+LHPE+R     +N      
Sbjct: 288 SKPVNKTDWQKKGKQSKEGQTQKVYCDHCQTSRHAKDKCWILHPELRPKREKNNQGRNDR 347

Query: 190 KHALTTEQAENFHQIQ 237
           K  LTT+QAE   +++
Sbjct: 348 KATLTTQQAEELPELK 363


>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
           gi|462415599|gb|EMJ20336.1| hypothetical protein
           PRUPE_ppa015965mg [Prunus persica]
          Length = 1484

 Score = 95.1 bits (235), Expect(2) = 2e-28
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T PHP+ Y L  IQKD  ++++ QC   FAI  +YID+V CEVV L+V  V +G  YL
Sbjct: 432 LETTPHPKPYPLGWIQKDVDLQITKQCTFKFAITNRYIDEVTCEVVPLDVCQVILGSPYL 491

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINAC 673
           WD DA+ ++R  KY  VKDGKE+ INAC
Sbjct: 492 WDRDAIHYRRLRKYRLVKDGKEFHINAC 519



 Score = 59.3 bits (142), Expect(2) = 2e-28
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +3

Query: 183 EEQTRLDNRASRELPPNTKPDESLVLIPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDP 362
           + +  L  + + ELP   +PD +L L+  P  ++D   + ELF V IQV +S+V AIIDP
Sbjct: 356 DRKATLTTQQAEELPELKQPDVTLTLMTRPADIEDTYNREELFHVNIQVKQSVVQAIIDP 415

Query: 363 ASFRRLISEEFVKEM 407
            S + LISE  V+++
Sbjct: 416 GSQKNLISEALVRKV 430


>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
           gi|462421192|gb|EMJ25455.1| hypothetical protein
           PRUPE_ppa018408mg, partial [Prunus persica]
          Length = 1440

 Score = 95.1 bits (235), Expect(2) = 2e-28
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T PHP+ Y L  IQKD  ++++ QC   FAI  +YID+V CEVV L+V  V +G  YL
Sbjct: 422 LETTPHPKPYPLGWIQKDVDLQITKQCTFKFAITNRYIDEVTCEVVPLDVCQVILGSPYL 481

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINAC 673
           WD DA+ ++R  KY  VKDGKE+ INAC
Sbjct: 482 WDRDAIHYRRLRKYRLVKDGKEFHINAC 509



 Score = 59.3 bits (142), Expect(2) = 2e-28
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +3

Query: 183 EEQTRLDNRASRELPPNTKPDESLVLIPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDP 362
           + +  L  + + ELP   +PD +L L+  P  ++D   + ELF V IQV +S+V AIIDP
Sbjct: 346 DRKATLTTQQAEELPELKQPDVTLTLMTRPADIEDTYNREELFHVNIQVKQSVVQAIIDP 405

Query: 363 ASFRRLISEEFVKEM 407
            S + LISE  V+++
Sbjct: 406 GSQKNLISEALVRKV 420



 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
 Frame = +1

Query: 37  SKSVEKHEKQDK----EEGSMGKNYCKHCDNNRHMKRMCWVLHPEVR-----SN*SVGKN 189
           SK V K + Q K    +EG   K YC HC  +RH K  CW+LHPE+R     +N      
Sbjct: 288 SKPVNKTDWQKKGKQSKEGQTQKVYCDHCQTSRHAKDKCWILHPELRPKREKNNQGRNDR 347

Query: 190 KHALTTEQAENFHQIQ 237
           K  LTT+QAE   +++
Sbjct: 348 KATLTTQQAEELPELK 363


>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
           gi|462423886|gb|EMJ28149.1| hypothetical protein
           PRUPE_ppa025194mg, partial [Prunus persica]
          Length = 1347

 Score = 95.1 bits (235), Expect(2) = 2e-28
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T PHP+ Y L  IQKD  ++++ QC   FAI  +YID+V CEVV L+V  V +G  YL
Sbjct: 351 LETTPHPKPYPLGWIQKDVDLQITKQCTFKFAITNRYIDEVTCEVVPLDVCQVILGSPYL 410

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINAC 673
           WD DA+ ++R  KY  VKDGKE+ INAC
Sbjct: 411 WDRDAIHYRRLRKYRLVKDGKEFHINAC 438



 Score = 59.3 bits (142), Expect(2) = 2e-28
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +3

Query: 183 EEQTRLDNRASRELPPNTKPDESLVLIPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDP 362
           + +  L  + + ELP   +PD +L L+  P  ++D   + ELF V IQV +S+V AIIDP
Sbjct: 275 DRKATLTTQQAEELPELKQPDVTLTLMTRPADIEDTYNREELFHVNIQVKQSVVQAIIDP 334

Query: 363 ASFRRLISEEFVKEM 407
            S + LISE  V+++
Sbjct: 335 GSQKNLISEALVRKV 349



 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
 Frame = +1

Query: 37  SKSVEKHEKQDK----EEGSMGKNYCKHCDNNRHMKRMCWVLHPEVR-----SN*SVGKN 189
           SK V K + Q K    +EG   K YC HC  +RH K  CW+LHPE+R     +N      
Sbjct: 217 SKPVNKTDWQKKGKQSKEGQTQKVYCDHCQTSRHAKDKCWILHPELRPKREKNNQGRNDR 276

Query: 190 KHALTTEQAENFHQIQ 237
           K  LTT+QAE   +++
Sbjct: 277 KATLTTQQAEELPELK 292


>ref|XP_007220363.1| hypothetical protein PRUPE_ppa016496mg, partial [Prunus persica]
           gi|462416825|gb|EMJ21562.1| hypothetical protein
           PRUPE_ppa016496mg, partial [Prunus persica]
          Length = 373

 Score = 80.1 bits (196), Expect(2) = 5e-24
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T PHP+ Y L  IQKD  ++++ QC   FAI  +YI++V CEVV L+V  V +G   L
Sbjct: 290 LETTPHPKPYPLGWIQKDVDLQITKQCTFKFAITNRYINEVTCEVVPLDVCQVILGSPSL 349

Query: 590 WD*DAMLHQRECKYGSVKDGKEYL 661
           WD DA+ ++R  KY  VKDGK+ L
Sbjct: 350 WDRDAIHYRRLRKYRLVKDGKDGL 373



 Score = 59.3 bits (142), Expect(2) = 5e-24
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = +3

Query: 183 EEQTRLDNRASRELPPNTKPDESLVLIPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDP 362
           + +  L  + + ELP   +PD +L L+  P  ++D   + ELF V IQV +S+V AIIDP
Sbjct: 214 DRKATLTTQQAEELPELKQPDVTLTLMTRPADIEDTYNREELFHVNIQVKQSVVQAIIDP 273

Query: 363 ASFRRLISEEFVKEM 407
            S + LISE  V+++
Sbjct: 274 GSQKNLISEALVRKV 288


>ref|XP_007214321.1| hypothetical protein PRUPE_ppb019697mg [Prunus persica]
           gi|462410186|gb|EMJ15520.1| hypothetical protein
           PRUPE_ppb019697mg [Prunus persica]
          Length = 303

 Score = 87.8 bits (216), Expect = 9e-15
 Identities = 45/87 (51%), Positives = 57/87 (65%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP+ Y L  IQKD  + ++ QC   FAI  +YID+V CEVV L+V  V +G  YL
Sbjct: 54  LDTTPHPKLYPLGWIQKDVDLHITKQCTFKFAITNRYIDEVTCEVVPLDVCQVILGSPYL 113

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINA 670
           WD DA+ ++R  KY  VKD KE+ INA
Sbjct: 114 WDRDAIHYRRLRKYRLVKDAKEFHINA 140


>ref|XP_004305946.1| PREDICTED: uncharacterized protein LOC101303732 [Fragaria vesca
           subsp. vesca]
          Length = 458

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L+T+ HP+ Y L  I+K+  + V  QC   FA++  YID+V C+VV L+V  V +G  YL
Sbjct: 247 LKTVKHPKPYPLGWIRKEAGLSVVNQCTFKFALHESYIDEVTCDVVPLDVCQVILGNPYL 306

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINA 670
           WD  A+  +R  KY   KD ++Y++ A
Sbjct: 307 WDRYAIYDRRAQKYTLTKDERQYVVRA 333


>gb|AAV35810.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|108709581|gb|ABF97376.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 651

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 38/119 (31%), Positives = 58/119 (48%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T  HP  Y ++ +    R +V+  CR++F+I G Y D V C+VV +   ++ +G L+ 
Sbjct: 464 LTTRTHPHPYHIQWLNDSGRAKVTQVCRVSFSI-GSYADSVDCDVVSMQACSLLLGRLWE 522

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQDGEATMLFAMISILKEDEGQRTQ 766
            D DA  H R  KY  V +GK+  +   T     + D E        + LK DE +  Q
Sbjct: 523 HDNDATHHGRSNKYTFVHNGKKITLLPLTPAEIVEADKERA------ASLKLDESENQQ 575



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLR 434
           LF++   +N      IID  S   L+S + VK    KL LT R
Sbjct: 429 LFEIFFVINNRRARVIIDGGSCNNLVSSDLVK----KLGLTTR 467


>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
           gi|462422461|gb|EMJ26724.1| hypothetical protein
           PRUPE_ppa026504mg, partial [Prunus persica]
          Length = 750

 Score = 41.6 bits (96), Expect(2) = 3e-07
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLN 556
           L T  HP+ Y L  IQKD  ++++ QC   FAI  +YID+    ++  N
Sbjct: 42  LNTTLHPKLYPLGWIQKDVDLQITKQCTFKFAITNRYIDEETYNLLTAN 90



 Score = 41.2 bits (95), Expect(2) = 3e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +3

Query: 303 ELFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           ELF V IQV +S+V AIIDP S + LISE  V+++   L  TL P
Sbjct: 6   ELFHVNIQVKQSVVQAIIDPGSQKNLISEALVRKV--GLNTTLHP 48


>gb|ABG65972.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1315

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T  HP  Y ++ +    R +V+  CR+ F+I G Y D V C+VV +   ++ +G  + 
Sbjct: 526 LTTRTHPHPYHIQWLNDSGRAKVTQVCRVLFSI-GSYADSVDCDVVPMQACSLLLGCPWE 584

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQDGEATMLFAMISILKEDE 751
            D DA  H R  KY  V +GK++++   T     + + E   +   +   K+D+
Sbjct: 585 HDNDATHHGRSNKYTFVHNGKKFILLPLTPAEIVEAESENQQVAKSVFPPKKDK 638



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLR 434
           LFQ+   +N      IID  S + L+S + VK    KL LT R
Sbjct: 491 LFQIFFVINNHRARVIIDGGSCKNLLSSDLVK----KLGLTTR 529


>gb|AAN09859.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 928

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T  HP  Y ++ +    R +V+  CR+ F+I G Y D V C+VV +   ++ +G  + 
Sbjct: 526 LTTRTHPHPYHIQWLNDSGRAKVTQVCRVLFSI-GSYADSVDCDVVPMQACSLLLGCPWE 584

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQDGEATMLFAMISILKEDE 751
            D DA  H R  KY  V +GK++++   T     + + E   +   +   K+D+
Sbjct: 585 HDNDATHHGRSNKYTFVHNGKKFILLPLTPAEIVEAESENQQVAKSVFPPKKDK 638



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLR 434
           LFQ+   +N      IID  S + L+S + VK    KL LT R
Sbjct: 491 LFQIFFVINNHRARVIIDGGSCKNLLSSDLVK----KLGLTTR 529


>ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781709 [Setaria italica]
          Length = 1055

 Score = 50.4 bits (119), Expect(2) = 6e-07
 Identities = 30/99 (30%), Positives = 50/99 (50%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++ +    + +V+  CR++F+I G Y D V C+VV +   ++ +G  + 
Sbjct: 513 LSTRPHPHPYHIQWLNDSGKAKVTQTCRVSFSI-GAYADFVDCDVVPMQACSLLLGRPWE 571

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQDGE 706
            D DA  H R  KY  +  G++  +   T     + D E
Sbjct: 572 HDNDATHHGRSNKYTLMYKGQKITLVPLTPVEIVQADKE 610



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 23/59 (38%), Positives = 28/59 (47%)
 Frame = +3

Query: 261 IPHPESLQDMKIQAELFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           I  PESLQ    +  LFQ    +N      IID  S   L+S + VK    KL L+ RP
Sbjct: 467 IQQPESLQ----RHNLFQTFFVINNRRARVIIDGGSCNNLVSSDLVK----KLGLSTRP 517


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score = 56.2 bits (134), Expect(2) = 2e-06
 Identities = 30/85 (35%), Positives = 48/85 (56%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++ +    +V+V+   RINFAI G Y D V C+VV ++  N+ +G  + 
Sbjct: 517 LTTKPHPHPYHIQWLNNSGKVKVTKLVRINFAI-GSYRDVVDCDVVPMDACNILLGRPWQ 575

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLI 664
           +D D M H R  +Y  +   K+ ++
Sbjct: 576 FDSDCMHHGRSNQYSLIHHDKKIIL 600



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           LFQ K  +       IID  S   L S + V+    KL LT +P
Sbjct: 482 LFQTKCVIKERSCRLIIDGGSCNNLASSDMVE----KLALTTKP 521


>gb|ABA96215.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 27/97 (27%), Positives = 52/97 (53%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++      +++V+   +I F+I G Y D+++C+VV +   +V +G  + 
Sbjct: 497 LTTHPHPHPYHIQWFNTCGKMKVTRLVKIPFSI-GSYHDQIECDVVHMQACSVILGRPWQ 555

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQD 700
           +D + +   R   Y  + DGK  ++++ T  +  K D
Sbjct: 556 YDREVVFDGRTNTYKFMFDGKRVVLHSMTPAAALKDD 592



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 273 ESLQDMKIQAELFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           E  ++   +  LFQ K+ V    V  IID  S   L SEE VK    KL LT  P
Sbjct: 451 EKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVK----KLGLTTHP 501


>gb|ABA91262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 767

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 27/97 (27%), Positives = 52/97 (53%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++      +++V+   +I F+I G Y D+++C+VV +   +V +G  + 
Sbjct: 497 LTTHPHPHPYHIQWFHTCGKMKVTRLVKIPFSI-GSYHDQIECDVVHMQACSVILGRPWQ 555

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQD 700
           +D + +   R   Y  + DGK  ++++ T  +  K D
Sbjct: 556 YDREVVFDGRTNTYKFMFDGKRVVLHSMTPAAALKDD 592



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 273 ESLQDMKIQAELFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           E  ++   +  LFQ K+ V    V  IID  S   L SEE VK    KL LT  P
Sbjct: 451 EKCEEQNQRHNLFQSKVLVKGHTVKMIIDSGSCNNLASEEMVK----KLGLTTHP 501


>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
          Length = 2388

 Score = 53.9 bits (128), Expect(2) = 6e-06
 Identities = 29/86 (33%), Positives = 49/86 (56%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++ +    + +V+    INFAI G Y D V+C+VV + V N+ +G  + 
Sbjct: 405 LSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAI-GNYHDVVECDVVPMQVCNILLGRPWQ 463

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLIN 667
           +D D+M H R  +Y  +   K+ +++
Sbjct: 464 FDRDSMHHGRSNQYSFLYHDKKIVLH 489



 Score = 24.3 bits (51), Expect(2) = 6e-06
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           LFQ K  V       IID  S   L S E V+    KL L+ +P
Sbjct: 370 LFQTKCVVKERCCRMIIDGGSCNNLASSEMVE----KLALSTKP 409


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score = 54.7 bits (130), Expect(2) = 8e-06
 Identities = 30/97 (30%), Positives = 53/97 (54%)
 Frame = +2

Query: 410  LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
            L T PHP  Y ++ +    +V+V+    INFAI G Y D V+C+VV +   N+ +G  + 
Sbjct: 881  LSTKPHPHPYYIQWLNNSGKVKVTKLVHINFAI-GNYHDVVECDVVPMQACNILLGRPWQ 939

Query: 590  WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQD 700
            +D D+M H R  +Y  +   K+ +++  ++    + D
Sbjct: 940  FDRDSMHHGRSNQYSFLYHDKKIVLHPMSSEDILRDD 976



 Score = 23.1 bits (48), Expect(2) = 8e-06
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           LFQ K  +       IID  S   L S E V+    KL L+ +P
Sbjct: 846 LFQTKCVLKERCCRMIIDGGSCNNLASSEMVE----KLALSTKP 885


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score = 54.7 bits (130), Expect(2) = 8e-06
 Identities = 30/97 (30%), Positives = 53/97 (54%)
 Frame = +2

Query: 410  LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
            L T PHP  Y ++ +    +V+V+    INFAI G Y D V+C+VV +   N+ +G  + 
Sbjct: 872  LSTKPHPHPYYIQWLNNSGKVKVTKLVHINFAI-GNYHDVVECDVVPMQACNILLGRPWQ 930

Query: 590  WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQD 700
            +D D+M H R  +Y  +   K+ +++  ++    + D
Sbjct: 931  FDRDSMHHGRSNQYSFLYHDKKIVLHPMSSEDILRDD 967



 Score = 23.1 bits (48), Expect(2) = 8e-06
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           LFQ K  +       IID  S   L S E V+    KL L+ +P
Sbjct: 837 LFQTKCVLKERCCRMIIDGGSCNNLASSEMVE----KLALSTKP 876


>ref|XP_007019924.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508725252|gb|EOY17149.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 402

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T  HP  Y++R I+K  +V V+ QC + F +     D+  C+VV ++VG++ +G L+L
Sbjct: 277 LPTSKHPHPYKIRWIKKGHKVPVNTQCLVKFTMGDNLDDEALCDVVPMDVGHILVGRLWL 336

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLI---------NACTAPSKSK 694
           +D D     +   Y   KD K Y +         +A ++P+ SK
Sbjct: 337 YDHDMDHKTKPNTYSFYKDNKWYTLYPLKEEIKKSATSSPTNSK 380


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431012|gb|AAP52850.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 2447

 Score = 53.1 bits (126), Expect(2) = 1e-05
 Identities = 29/97 (29%), Positives = 52/97 (53%)
 Frame = +2

Query: 410 LQTIPHPETYQLRRIQKDCRVEVSMQCRINFAINGKYIDKVQCEVVLLNVGNVKMGILYL 589
           L T PHP  Y ++ +    + +V+    INFAI G Y D V+C+VV +   N+ +G  + 
Sbjct: 514 LSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAI-GNYHDVVECDVVPMQACNILLGRPWQ 572

Query: 590 WD*DAMLHQRECKYGSVKDGKEYLINACTAPSKSKQD 700
           +D D+M H R  +Y  +   K+ ++++ +     + D
Sbjct: 573 FDRDSMHHGRSNQYSFLYHDKKIVLHSMSPEDILRDD 609



 Score = 24.3 bits (51), Expect(2) = 1e-05
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 306 LFQVKIQVNRSLVDAIIDPASFRRLISEEFVKEMTYKLFLTLRP 437
           LFQ K  V       IID  S   L S E V+    KL L+ +P
Sbjct: 479 LFQTKCVVKERCCRMIIDGGSCNNLASSEMVE----KLALSTKP 518