BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00010323
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015351.1| Pentatricopeptide repeat-containing protein,...   183   3e-44
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   182   8e-44
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   173   3e-41
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   173   4e-41
ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phas...   172   6e-41
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr...   168   9e-40
gb|AFK33630.1| unknown [Lotus japonicus]                              165   1e-38
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]     160   3e-37
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   156   5e-36
gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial...   154   1e-35
ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutr...   143   3e-32
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   142   9e-32
ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar...   139   5e-31
ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Caps...   138   1e-30
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ...   135   7e-30
ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi...   132   6e-29
ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group] g...   111   2e-22
ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388...   106   6e-21

>ref|XP_007015351.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508785714|gb|EOY32970.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 413

 Score =  183 bits (465), Expect = 3e-44
 Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 5/190 (2%)
 Frame = +1

Query: 40  PPLRRPKRHNP-DLHNHTTDTPKPHVPNPHNPERPRAP----TSTTSDVLCLMDSLRLPI 204
           PP+ +     P  +   ++ TP P  P P +  +P +     + TTSD+L LMDSL LPI
Sbjct: 34  PPISQLHSQLPLRITKQSSKTPPP--PTPISTSKPISSNPCSSHTTSDILRLMDSLSLPI 91

Query: 205 PPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIANARQLF 384
           PPDIYASL+KECTVTR + +A ELH+H++ +  +P +P LNRLLLMHVSCG +  AR LF
Sbjct: 92  PPDIYASLVKECTVTRHSRRALELHSHIRNSRIKPSLPLLNRLLLMHVSCGHLDIARHLF 151

Query: 385 DEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLKACVNTT 564
           D+M  +DFNSWA MI   +  GD E+A+  F+ M + H  + + P+WIIV  LK+CV T 
Sbjct: 152 DQMLLRDFNSWAIMIVACLHAGDSEQAIAYFVRM-ERHNLLFKCPSWIIVCLLKSCVVTK 210

Query: 565 NMGLGEQVHG 594
           NMGLG+QVHG
Sbjct: 211 NMGLGKQVHG 220


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  182 bits (461), Expect = 8e-44
 Identities = 91/197 (46%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
 Frame = +1

Query: 10  PSKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHVPN-PHNPERPRAPTSTTSDVLCLMD 186
           PS  + ++   PLR P  + P   NHT+  P           ++ +   +TTSD+L LM+
Sbjct: 33  PSPNHQLEFRLPLRHPIHNFP---NHTSPQPLTQTTTFTKKKKKKKRKGATTSDILHLME 89

Query: 187 SLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIA 366
           +L  P+P DIY SLIKECTV+ D   A EL  H+ ++G +P +PFLNR+L+M VSCG + 
Sbjct: 90  ALPFPVPIDIYTSLIKECTVSGDPETAIELATHISKSGIKPPLPFLNRILVMFVSCGLLE 149

Query: 367 NARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLK 546
           NAR +FD+M  +DFN+WAT+   Y DN DYEEA  +F+ ML   G ++EFP WI    L+
Sbjct: 150 NARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNMLTQLG-MMEFPPWIWACLLR 208

Query: 547 ACVNTTNMGLGEQVHGW 597
           AC  T N+ LG QVHGW
Sbjct: 209 ACACTVNVPLGMQVHGW 225


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  173 bits (439), Expect = 3e-41
 Identities = 97/205 (47%), Positives = 124/205 (60%), Gaps = 7/205 (3%)
 Frame = +1

Query: 4   HHPSKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRA----PTSTTSDV 171
           HHP     IQ  PP       N D     ++  K         ++  +     TST +D+
Sbjct: 170 HHPGTITIIQ--PPKINSTAFNDDDDCKGSNKKKKKKEKKKEKKKSNSNATPTTSTPTDI 227

Query: 172 LCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVS 351
           L LMD L LPIPPDIYASLIKE + T DA QA +L AH+ R+G       LNR+LLM+VS
Sbjct: 228 LRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVS 287

Query: 352 CGSIANARQLFDEMT--RKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNI-LEFPA 522
           CG I  AR +FD+M    K+  SWA M+A Y+DNG YEEA+ +F+ M++ H  I LE PA
Sbjct: 288 CGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTIMLELPA 347

Query: 523 WIIVSTLKACVNTTNMGLGEQVHGW 597
           WI +  LKACV+T N+ LG+QVHGW
Sbjct: 348 WIFICVLKACVHTMNLTLGKQVHGW 372


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  173 bits (438), Expect = 4e-41
 Identities = 87/152 (57%), Positives = 109/152 (71%), Gaps = 3/152 (1%)
 Frame = +1

Query: 151 TSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNR 330
           TST +D+L LMD L LPIPPDIYASLIKE + T DA QA +L AH+ R+G       LNR
Sbjct: 58  TSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNR 117

Query: 331 LLLMHVSCGSIANARQLFDEMT--RKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN 504
           +LLM+VSCG I  AR +FD+M    K+  SWA M+A Y+DNG YEEA+ +F+ M++ H  
Sbjct: 118 ILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHST 177

Query: 505 I-LEFPAWIIVSTLKACVNTTNMGLGEQVHGW 597
           I LE PAWI +  LKACV+T N+ LG+QVHGW
Sbjct: 178 IMLELPAWIFICVLKACVHTMNLTLGKQVHGW 209


>ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
           gi|561031472|gb|ESW30051.1| hypothetical protein
           PHAVU_002G120500g [Phaseolus vulgaris]
          Length = 420

 Score =  172 bits (436), Expect = 6e-41
 Identities = 90/196 (45%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
 Frame = +1

Query: 13  SKKYAIQICPPLRRPKRHNP-DLHNHTTDTPKPHVPNPHNPERPRAPTSTTSDVLCLMDS 189
           S  + +++ PPLR P    P  L   TT   K  +      E      +TT D+L LMD+
Sbjct: 34  SPSHQLELLPPLRYPIHTFPRPLIPQTTTFTKKEIKKKKRKE------ATTLDILHLMDA 87

Query: 190 LRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIAN 369
           L  PI  DIY SLIKECTV+ D   A EL+ H+ ++  +P +PFLNR+L+M VSCG + N
Sbjct: 88  LPFPITIDIYTSLIKECTVSGDPETAIELYTHISKSDIKPPLPFLNRILIMFVSCGMLEN 147

Query: 370 ARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFPAWIIVSTLKA 549
           AR +F++M  +DFNSWAT+   Y DN +YEEA  +F+ ML   G +L+FP WI    L+A
Sbjct: 148 ARHMFEKMRVRDFNSWATLFVAYYDNAEYEEATAVFVNMLGQLG-MLQFPPWIWACLLRA 206

Query: 550 CVNTTNMGLGEQVHGW 597
           C  T N+ LG QVHGW
Sbjct: 207 CACTLNVPLGLQVHGW 222


>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
           gi|557539679|gb|ESR50723.1| hypothetical protein
           CICLE_v10033975mg [Citrus clementina]
          Length = 425

 Score =  168 bits (426), Expect = 9e-40
 Identities = 97/207 (46%), Positives = 123/207 (59%), Gaps = 10/207 (4%)
 Frame = +1

Query: 4   HHPSKKYAIQICPPLRRPKRHNPDLHNHTTD--TPKPHVP-----NPHNPERPRAPTSTT 162
           H PS      +C P       N  + NH     +PKP  P     N     +     +++
Sbjct: 11  HSPSSTSRF-VCHPCGSNNLINSAVENHQLPLRSPKPTKPLKTSSNWRETTQSIPANTSS 69

Query: 163 SDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHV-KRTGFRPDVPFLNRLLL 339
           +++L LMD+L LPI  D+Y  LIKECT  +D+  A EL  H+ KR   +P + FLNRLLL
Sbjct: 70  ANILHLMDNLCLPITTDMYTCLIKECTFQKDSAGAFELLNHIRKRVNIKPTLLFLNRLLL 129

Query: 340 MHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN--ILE 513
           MHVSCG +  ARQLFDEM  +DFNSWA MI GYVD  DY+E + +F  M++      +L 
Sbjct: 130 MHVSCGQLDTARQLFDEMPLRDFNSWAVMIVGYVDVADYQECITLFAEMMKRKKGHMLLV 189

Query: 514 FPAWIIVSTLKACVNTTNMGLGEQVHG 594
           FPAWIIV  LKACV T NM LG+QVHG
Sbjct: 190 FPAWIIVCVLKACVCTMNMELGKQVHG 216


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  165 bits (417), Expect = 1e-38
 Identities = 81/148 (54%), Positives = 100/148 (67%)
 Frame = +1

Query: 154 STTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRL 333
           +TTS +L LMD L  PIP DIY SLIKECT++ D   A ELH H+  +G +P + F+NR+
Sbjct: 12  ATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPPLSFINRI 71

Query: 334 LLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILE 513
           L+M VSCG +  A QLFD M  KDFNSWAT+   Y DN DYEEA+++F+ ML   G + E
Sbjct: 72  LVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAMLHQLG-MSE 130

Query: 514 FPAWIIVSTLKACVNTTNMGLGEQVHGW 597
           FP WI    LKAC    N+ LG QVHGW
Sbjct: 131 FPPWICACFLKACACIENIPLGMQVHGW 158


>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Cicer arietinum]
          Length = 418

 Score =  164 bits (414), Expect = 2e-38
 Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
 Frame = +1

Query: 10  PSKKYAIQICPPLRRPKRHNPDLHNHT---TDTPKPHVPNPHNPERPRAPTSTTSDVLCL 180
           PS  + + +  P R PK  N   H  +   T TP  +  N  N    +  ++TTS +L L
Sbjct: 21  PSSNHQLHLRLPFRNPKLINFPHHPSSQPLTVTPPRNKNNTKNKNNNKRKSATTSHILPL 80

Query: 181 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGS 360
           MD+L  PIP DIY SL+KECT++ D   A ELH+H+ R+G  P +  LNR+L+M VSCG 
Sbjct: 81  MDALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRSGIGPPLTLLNRILIMFVSCGL 140

Query: 361 IANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILEFP--AWIIV 534
           + +AR +FDEM  ++F+SWA +   Y +N DYE A+++F+ ML+  G ++EFP   W   
Sbjct: 141 LQSARHVFDEMPVRNFHSWAILFVAYYENSDYENAIDVFMRMLRQLG-VMEFPFLPWFWS 199

Query: 535 STLKACVNTTNMGLGEQVHG 594
             L AC  T N+ LG QVHG
Sbjct: 200 CLLTACACTVNVPLGMQVHG 219


>gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]
          Length = 453

 Score =  160 bits (404), Expect = 3e-37
 Identities = 96/214 (44%), Positives = 123/214 (57%), Gaps = 21/214 (9%)
 Frame = +1

Query: 13  SKKYAIQICPPLRRPKRHNPDLHNHTTDTPKPHV-PNP-HNPERPRA------------- 147
           + K   Q+  PLR P + +  +++    T  P V PN  H  E   +             
Sbjct: 37  TSKATFQVSLPLRGPNKPHSVINHEKLGTIAPQVRPNSCHTVEANCSSQILVEKKMRKKN 96

Query: 148 -----PTSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRP- 309
                P  +TSDVL LMD+L LPI PD+Y S +KECT++ D   A +LH H+ R   +  
Sbjct: 97  ALIAPPACSTSDVLRLMDALCLPISPDMYISFMKECTISADFCGAEDLHNHISRNSLQHL 156

Query: 310 DVPFLNRLLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML 489
            +P LNRLL M+VSCG +  A  LF  M  KDF SWATMI   V+N DYEEA  +F+ ML
Sbjct: 157 ALPLLNRLLFMNVSCGRLDLACDLFYRMPFKDFKSWATMIVANVNNSDYEEATSLFLKML 216

Query: 490 QYHGNILEFPAWIIVSTLKACVNTTNMGLGEQVH 591
            +H N+LEFP+WIIV  LK CV T NM LG+QVH
Sbjct: 217 -HHINMLEFPSWIIVCLLKTCVCTRNMELGKQVH 249


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  156 bits (394), Expect = 5e-36
 Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
 Frame = +1

Query: 46  LRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRAPTSTTSDVLCLMDSLRLPIPPDIYAS 225
           LR P R NP   N +   P      P    + R    TTS +L LMD+L  PI  DIY S
Sbjct: 36  LRLPLRRNPKPKNLSLIHPSSQPITPPKKSKRRRKCDTTSHILPLMDALHFPITIDIYTS 95

Query: 226 LIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIANARQLFDEMTRKD 405
           L+KECT++ D   A ELH  +   G    +  LNR+L+M VSCG + NAR++FD M+ +D
Sbjct: 96  LVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARRVFDVMSVRD 155

Query: 406 FNSWATMIAGYVDNGDYEEALEIFITML-QYHGNILEFPAWIIVSTLKACVNTTNMGLGE 582
           F+SWAT+   Y +NG+YE A+++F++ML Q       FP WI    LKAC  T N+ LG 
Sbjct: 156 FHSWATLFVSYYENGEYENAIDVFVSMLCQLDVMGFSFPPWIWSCLLKACACTMNVPLGM 215

Query: 583 QVHG 594
           QVHG
Sbjct: 216 QVHG 219


>gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial [Mimulus
           guttatus]
          Length = 345

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/143 (54%), Positives = 106/143 (74%), Gaps = 7/143 (4%)
 Frame = +1

Query: 190 LRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIAN 369
           L+LPIPPDIY SLIKECT   D +++ ELH H++R+GFR  +P LNRLLLM+VS G +  
Sbjct: 1   LKLPIPPDIYTSLIKECTELGDPLKSIELHEHMRRSGFRFTLPLLNRLLLMYVSSGCLDR 60

Query: 370 ARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML--QYHGNI----LEFP-AWI 528
           ARQLFD+M  +DFNSWA +IAG+V+NG+++EA+ +F+ ML  Q  GN+    + F  + I
Sbjct: 61  ARQLFDQMFLRDFNSWAVLIAGFVENGEHDEAINLFVEMLNRQDMGNVGLDRMGFSVSGI 120

Query: 529 IVSTLKACVNTTNMGLGEQVHGW 597
           +V  LKAC+ T++  LG QVHGW
Sbjct: 121 LVCVLKACLFTSDFELGTQVHGW 143


>ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutrema salsugineum]
           gi|557093074|gb|ESQ33656.1| hypothetical protein
           EUTSA_v10009456mg [Eutrema salsugineum]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32
 Identities = 69/149 (46%), Positives = 98/149 (65%)
 Frame = +1

Query: 148 PTSTTSDVLCLMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLN 327
           P  +TSD+L LMDSL LP   D+Y+ L KE T   D   A +L  H+  +  RP   FLN
Sbjct: 69  PRCSTSDILRLMDSLSLPGNEDLYSCLAKESTTECDQRGAYDLQVHIMNSSVRPRTTFLN 128

Query: 328 RLLLMHVSCGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNI 507
           RLLLMHVSCG +   RQ+FD+M ++DF+SWA +I G ++ GDY++A+ +F++ML+    +
Sbjct: 129 RLLLMHVSCGRLDITRQMFDKMPQRDFHSWAIVILGCIEMGDYQDAVFLFVSMLKNQNRV 188

Query: 508 LEFPAWIIVSTLKACVNTTNMGLGEQVHG 594
            + P WI+   LKAC    ++ LG+QVHG
Sbjct: 189 SKIPPWIMGCVLKACGMIRDLDLGKQVHG 217


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  142 bits (357), Expect = 9e-32
 Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 12/206 (5%)
 Frame = +1

Query: 13  SKKYAI--QICPPLRRPKRHNPDLHNHTTDTPKPHVPN--PHNPERPRAPTSTTSDVLCL 180
           SK Y++  + C    +  + N    NHT   P    PN  P N   P   + ++SD++ L
Sbjct: 6   SKLYSVGARQCINADQSTKKNITAPNHTK-LPPLRTPNIKPIN-HLPAKKSCSSSDIMRL 63

Query: 181 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAH-VKRTGFRPDVPFLNRLLLMHVSCG 357
           MDSL  PIPPDIY SLIKECT+T D+ +A  LH+H + +T  +   P ++RLLLMHVSCG
Sbjct: 64  MDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHLISQTNLKLTPPLVHRLLLMHVSCG 123

Query: 358 SIANARQLFDEM-TRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYH----GNILEFPA 522
            +  AR LFD+M  +KDF SW  +I G   N  YE  + +FI ML  H    G + +   
Sbjct: 124 QLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHSVYDGLMFDLNT 183

Query: 523 W--IIVSTLKACVNTTNMGLGEQVHG 594
           W  II+  +K C+ + N+ LG+QVHG
Sbjct: 184 WNIIILCIIKCCIYSMNISLGKQVHG 209


>ref|XP_004292904.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Fragaria vesca subsp. vesca]
          Length = 421

 Score =  140 bits (354), Expect = 2e-31
 Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 9/193 (4%)
 Frame = +1

Query: 43  PLRRPKRHNPDLHNHTTDTPKPHVPNPHNPERPRAPTSTTSDVLCLMDSLRLPIPPD--- 213
           PL R  + NP   N+TT   K +       +       +TSD+L LMD L++P+      
Sbjct: 41  PLPRSSKSNPLTSNNTTR--KKNNTRKKRKKNENGSRCSTSDILRLMDGLQVPVTSTTLS 98

Query: 214 ---IYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIANARQLF 384
              +YASLI +C+   D+  A  L AH+ R    P +  LNRLLL HV  G + NA QLF
Sbjct: 99  DNHMYASLINDCS---DSGAALHLQAHLTRKSPPPPLHLLNRLLLRHVCNGRLDNAHQLF 155

Query: 385 DEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQY---HGNILEFPAWIIVSTLKACV 555
           DEM  KDFNSWAT+I  Y  N DY EAL +F++ML     H +I EFPAWI+   L A  
Sbjct: 156 DEMPLKDFNSWATLIVAYAQNADYAEALRLFLSMLHLQDCHVDISEFPAWIMACVLDA-- 213

Query: 556 NTTNMGLGEQVHG 594
            T ++GLGEQ+HG
Sbjct: 214 -TMDVGLGEQLHG 225


>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
           hypothetical protein [Arabidopsis thaliana]
           gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
           thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 409

 Score =  139 bits (351), Expect = 5e-31
 Identities = 77/184 (41%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
 Frame = +1

Query: 46  LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 222
           LR+PK        H    P   +  P   P+ P +  ST SD+L LMDSL LP   DIY+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQPQNPSSRCST-SDILRLMDSLSLPGNEDIYS 92

Query: 223 SLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIANARQLFDEMTRK 402
            L KE     D   A EL  H+ ++  RP + F+NRLLLMHVSCG +   RQ+FD M  +
Sbjct: 93  CLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHR 152

Query: 403 DFNSWATMIAGYVDNGDYEEALEIFITMLQY-HGNILEFPAWIIVSTLKACVNTTNMGLG 579
           DF+SWA +  G ++ GDYE+A  +F++ML++      + P+WI+   LKAC    +  LG
Sbjct: 153 DFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELG 212

Query: 580 EQVH 591
           +QVH
Sbjct: 213 KQVH 216


>ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Capsella rubella]
           gi|482572368|gb|EOA36555.1| hypothetical protein
           CARUB_v10011695mg [Capsella rubella]
          Length = 411

 Score =  138 bits (348), Expect = 1e-30
 Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
 Frame = +1

Query: 46  LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 222
           LR+PK        H    P   +  P     +  +P  + SD+L LMD+L LP   D+Y+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQTTQKSSPRCSISDILRLMDTLSLPGNEDLYS 93

Query: 223 SLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGSIANARQLFDEMTRK 402
            L KE     D   A EL  H+ ++  RP   F+NRLLLMHVSCG +   R +FD+M  +
Sbjct: 94  CLAKESARENDRRGAYELQVHIMKSSIRPSTTFVNRLLLMHVSCGRLDITRNMFDKMPHR 153

Query: 403 DFNSWATMIAGYVDNGDYEEALEIFITMLQY--HGNILEFPAWIIVSTLKACVNTTNMGL 576
           DF+SWA +  G ++ GDYE+A  +F+ ML++  +G   + P+WI+   LKAC    ++ L
Sbjct: 154 DFHSWAIVFLGCIEMGDYEDAALLFVAMLKHSKNGGAFKIPSWIMGCVLKACAMIRDLAL 213

Query: 577 GEQVHG 594
           G+QVHG
Sbjct: 214 GKQVHG 219


>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339528|gb|EFH69945.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score =  135 bits (341), Expect = 7e-30
 Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 3/185 (1%)
 Frame = +1

Query: 46  LRRPKRHNPDLHNHTTDTPKPHVPNPH-NPERPRAPTSTTSDVLCLMDSLRLPIPPDIYA 222
           LR+PK        H    P   +  P   P++P +P  +TSD+L LMDSL LP   D+Y+
Sbjct: 42  LRKPK--------HQKSEPVVVIQQPQIQPQKP-SPRCSTSDILRLMDSLSLPGNEDLYS 92

Query: 223 SLIKECTVTRDAVQAAELHAHVKRTGFR-PDVPFLNRLLLMHVSCGSIANARQLFDEMTR 399
            L KE     D   A EL  H+ ++  R P   F+NRLLLMHVSCG +   R +FD+M  
Sbjct: 93  CLAKESARENDRRGAYELQVHIMKSSIRRPTTTFVNRLLLMHVSCGRLDITRHMFDKMPH 152

Query: 400 KDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN-ILEFPAWIIVSTLKACVNTTNMGL 576
           +DF+SWA +  G ++ GDYE+A  +F++ML++  N   + P+WI+   LKAC    +  L
Sbjct: 153 RDFHSWAIVFLGCIEMGDYEDAALLFVSMLKHSQNGAFKIPSWIMGCVLKACAMIRDFEL 212

Query: 577 GEQVH 591
           G+QVH
Sbjct: 213 GKQVH 217


>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Solanum lycopersicum]
          Length = 465

 Score =  132 bits (333), Expect = 6e-29
 Identities = 69/143 (48%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
 Frame = +1

Query: 181 MDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHVKRTGFRPDVPFLNRLLLMHVSCGS 360
           MDSL   IP D+Y SLIKECT +RD + A E++ HV ++   P +P LNRLLLM V CG 
Sbjct: 1   MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKSDVIPSLPLLNRLLLMLVLCGC 60

Query: 361 IANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGNILE----FPAWI 528
              ARQLFD+M  ++  SWA MIAG V+NG+   AL +F+ M    GN+ +        I
Sbjct: 61  FEQARQLFDKMRVRNSQSWAAMIAGCVENGECVGALRLFMEMQSEAGNLCKCGDLIDDGI 120

Query: 529 IVSTLKACVNTTNMGLGEQVHGW 597
           +V  LKACV   N+  G Q+HGW
Sbjct: 121 LVCVLKACVELMNLEFGRQIHGW 143


>ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group]
           gi|24417179|dbj|BAC22540.1| putative pentatricopeptide
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|50508329|dbj|BAD30147.1| putative pentatricopeptide
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|113610815|dbj|BAF21193.1| Os07g0244400 [Oryza sativa
           Japonica Group] gi|125599686|gb|EAZ39262.1| hypothetical
           protein OsJ_23686 [Oryza sativa Japonica Group]
          Length = 435

 Score =  111 bits (277), Expect = 2e-22
 Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
 Frame = +1

Query: 40  PPLRRPKRHNPDLHNHTTDTPKPHVPNPHNPE------RPRAPTSTTS--------DVLC 177
           P LR+P +  P    H    P+P +P P          R +  T  T+        DVL 
Sbjct: 45  PALRKPTKPPPPPPLH----PRPSLPVPTTSSDDDGDIRRKPATGATASLCSSGAGDVLR 100

Query: 178 LMDSLRLPIPPDIYASLIKECTVTRDAVQAAELHAHV--KRTGFRPDVPFLNRLLLMHVS 351
           L+D+LRLP   D+Y SL+++C    DA + A +HAH+  K       +P  NRL+L + +
Sbjct: 101 LLDALRLPPDEDVYVSLLRDCA---DAAEVASVHAHIAGKFAVSGLPLPLANRLVLAYAA 157

Query: 352 CGSIANARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITML-QYHGNILEFPAWI 528
           CG I  ARQ+FDEM  K+  +WATM++ Y D   + +AL++F+ M  Q  G   +     
Sbjct: 158 CGDIGAARQVFDEMPVKNGITWATMVSAYSDGCFHHDALQLFVQMCHQVRGITGDHYTHA 217

Query: 529 IVSTLKACVNTTNMGLGEQVHGW 597
           IV+ L++C     +  GEQVH +
Sbjct: 218 IVAVLRSCARVNELQFGEQVHAF 240


>ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388|gb|ACF79778.1| unknown
           [Zea mays] gi|414884126|tpg|DAA60140.1| TPA:
           hypothetical protein ZEAMMB73_895402 [Zea mays]
          Length = 438

 Score =  106 bits (264), Expect = 6e-21
 Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 14/198 (7%)
 Frame = +1

Query: 40  PPLRRPKRHNPDLHNHTTDT---------PKPHVPNPHNPERPRAPTSTTSDVLCLMDSL 192
           P L RPK   P   N  TDT         P P   + H       P+S   DVL LMD+L
Sbjct: 54  PLLSRPKLPVPT--NTATDTTSGKDCTKKPPPEATDSH------PPSSGAGDVLRLMDAL 105

Query: 193 RLPIPPDIYASLIKECTVTRDAVQAAELHAHV--KRTGFRPDVPFLNRLLLMHVSCGSIA 366
            +P   DIY SL++EC    DA + A +HAH+  +R       P  NRLLL + +CG I 
Sbjct: 106 GIPPDEDIYISLLRECA---DAAEVASVHAHITARRASDGLPSPVANRLLLSYAACGDIE 162

Query: 367 NARQLFDEMTRKDFNSWATMIAGYVDNGDYEEALEIFITMLQYHGN-ILEFPAW--IIVS 537
            AR++FD M   +  +WATM++ Y D   + EA+ +F  M   HG  +L+   +   IV+
Sbjct: 163 AARRVFDGMPTTNGMAWATMVSAYSDGCLHHEAMRLFAHMC--HGTPVLDGDCYSHAIVA 220

Query: 538 TLKACVNTTNMGLGEQVH 591
            L++C     + LGEQVH
Sbjct: 221 VLRSCTRAGELRLGEQVH 238