BLASTX nr result
ID: Paeonia23_contig00003985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00003985
(531 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prun... 102 4e-28
ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma... 103 9e-28
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 102 9e-28
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 102 2e-27
ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Popu... 102 2e-27
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g... 103 3e-27
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g... 103 3e-27
dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgar... 101 3e-27
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 102 4e-27
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 102 6e-27
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 103 7e-27
gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subun... 101 7e-27
gb|AFK43820.1| unknown [Medicago truncatula] 100 7e-27
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 102 1e-26
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 101 1e-26
ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 1e-26
sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymeras... 98 2e-26
ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subun... 97 2e-26
ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 99 3e-26
ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutr... 97 3e-26
>ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
gi|462422774|gb|EMJ27037.1| hypothetical protein
PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 102 bits (253), Expect(2) = 4e-28
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 48.5 bits (114), Expect(2) = 4e-28
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK+ENS
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSENS 71
>ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|508708631|gb|EOY00528.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 113
Score = 103 bits (256), Expect(2) = 9e-28
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +2
Query: 101 EKMIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
++MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 41 KRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 90
Score = 46.2 bits (108), Expect(2) = 9e-28
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK+E S
Sbjct: 90 MLMTHVDLIEKLLNYNTLEKSETS 113
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 102 bits (253), Expect(2) = 9e-28
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 47.4 bits (111), Expect(2) = 9e-28
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK++NS
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSDNS 71
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|590591838|ref|XP_007017127.1|
RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|297739069|emb|CBI28558.3| unnamed protein product
[Vitis vinifera] gi|508787490|gb|EOY34746.1| RNA
polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 71
Score = 102 bits (253), Expect(2) = 2e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 46.2 bits (108), Expect(2) = 2e-27
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK+E S
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSETS 71
>ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 102 bits (253), Expect(2) = 2e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 46.2 bits (108), Expect(2) = 2e-27
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK+E S
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSEGS 71
>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
(abc10) [Oryza sativa Japonica Group]
gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
Os11g0194800 [Oryza sativa Japonica Group]
gi|215766304|dbj|BAG98532.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 74
Score = 103 bits (256), Expect(2) = 3e-27
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 44.7 bits (104), Expect(2) = 3e-27
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E +
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTETT 71
>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
Japonica Group]
Length = 72
Score = 103 bits (256), Expect(2) = 3e-27
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 44.7 bits (104), Expect(2) = 3e-27
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E +
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTETA 71
>dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520229|dbj|BAK04039.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 71
Score = 101 bits (252), Expect(2) = 3e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 45.8 bits (107), Expect(2) = 3e-27
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E S
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTETS 71
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 102 bits (253), Expect(2) = 4e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 45.1 bits (105), Expect(2) = 4e-27
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E S
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKNETS 71
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 102 bits (253), Expect(2) = 6e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 44.7 bits (104), Expect(2) = 6e-27
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAEN 320
+LMTHVDLIEKLLNYNTLEK E+
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTES 70
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 103 bits (256), Expect(2) = 7e-27
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 43.1 bits (100), Expect(2) = 7e-27
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAE 317
+LMTHVDLIEKLLNYNTLEK +
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTD 69
>gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Triticum urartu]
Length = 71
Score = 101 bits (252), Expect(2) = 7e-27
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 44.7 bits (104), Expect(2) = 7e-27
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E +
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTETN 71
>gb|AFK43820.1| unknown [Medicago truncatula]
Length = 71
Score = 100 bits (249), Expect(2) = 7e-27
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLD LQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDSYLDFLQADYTEGDALDALGLVRYCCRRM 48
Score = 45.8 bits (107), Expect(2) = 7e-27
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNT+EKAE S
Sbjct: 48 MLMTHVDLIEKLLNYNTMEKAEAS 71
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 102 bits (253), Expect(2) = 1e-26
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 43.9 bits (102), Expect(2) = 1e-26
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLE++E +
Sbjct: 48 MLMTHVDLIEKLLNYNTLERSETN 71
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Brachypodium distachyon]
Length = 71
Score = 101 bits (252), Expect(2) = 1e-26
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRM 48
Score = 44.3 bits (103), Expect(2) = 1e-26
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAE 317
+LMTHVDLIEKLLNYNTLEK E
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTE 69
>ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Setaria italica]
Length = 74
Score = 100 bits (250), Expect(2) = 1e-26
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD+YLDLLQADYTEGDALDAL LVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALNLVRYCCRRM 48
Score = 44.7 bits (104), Expect(2) = 1e-26
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAEN 320
+LMTHVDLIEKLLNYNTLEK E+
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKTED 70
>sp|Q39290.1|RPAB5_BRANA RecName: Full=DNA-directed RNA polymerases I, II, and III subunit
RPABC5; Short=RNA polymerases I, II, and III subunit
ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed
RNA polymerase III subunit L; AltName: Full=RPB10
homolog gi|533690|gb|AAA21279.1| RNA polymerase II
subunit RPB10 homolog; similar to yeast RNA polymerase
II subunit RPB10, Swiss-Prot Accession Number P22139
[Brassica napus]
Length = 71
Score = 97.8 bits (242), Expect(2) = 2e-26
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQ DYTEGDALDAL LVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRM 48
Score = 47.4 bits (111), Expect(2) = 2e-26
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK++NS
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSDNS 71
>ref|NP_849640.1| DNA-directed RNA polymerases II, IV and V subunit 10 [Arabidopsis
thaliana] gi|297843980|ref|XP_002889871.1| hypothetical
protein ARALYDRAFT_471284 [Arabidopsis lyrata subsp.
lyrata] gi|565468954|ref|XP_006292280.1| hypothetical
protein CARUB_v10018490mg [Capsella rubella]
gi|565491696|ref|XP_006303487.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
gi|75155887|sp|Q8LFJ6.1|NRPBA_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
10; AltName: Full=DNA-directed RNA Polymerase II subunit
L gi|21537033|gb|AAM61374.1| RNA polymerase II subunit
(hsRPB10), putative [Arabidopsis thaliana]
gi|26451764|dbj|BAC42977.1| putative RNA polymerase II
subunit hsRPB10 [Arabidopsis thaliana]
gi|94807650|gb|ABF47122.1| At1g11475 [Arabidopsis
thaliana] gi|110736743|dbj|BAF00334.1| hypothetical
protein [Arabidopsis thaliana]
gi|297335713|gb|EFH66130.1| hypothetical protein
ARALYDRAFT_471284 [Arabidopsis lyrata subsp. lyrata]
gi|332190620|gb|AEE28741.1| DNA-directed RNA polymerase
subunit NRPB10\NRPD10\NRPE10 [Arabidopsis thaliana]
gi|482560987|gb|EOA25178.1| hypothetical protein
CARUB_v10018490mg [Capsella rubella]
gi|482572198|gb|EOA36385.1| hypothetical protein
CARUB_v10010812mg [Capsella rubella]
Length = 71
Score = 97.4 bits (241), Expect(2) = 2e-26
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQ DYTEGDALDAL LVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDYTEGDALDALQLVRYCCRRM 48
Score = 47.4 bits (111), Expect(2) = 2e-26
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK++NS
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSDNS 71
>ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|224030055|gb|ACN34103.1| unknown [Zea mays]
gi|413916302|gb|AFW56234.1| LOW QUALITY PROTEIN:
DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 242
Score = 98.6 bits (244), Expect(2) = 3e-26
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2
Query: 104 KMIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
KMIIPVRCFTCGKVIGNKWD+YLDLLQADY+EGDALDAL L RYCCR M
Sbjct: 171 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRM 219
Score = 45.8 bits (107), Expect(2) = 3e-26
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK E S
Sbjct: 219 MLMTHVDLIEKLLNYNTLEKTETS 242
>ref|XP_006417353.1| hypothetical protein EUTSA_v10009269mg [Eutrema salsugineum]
gi|557095124|gb|ESQ35706.1| hypothetical protein
EUTSA_v10009269mg [Eutrema salsugineum]
Length = 71
Score = 97.1 bits (240), Expect(2) = 3e-26
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +2
Query: 107 MIIPVRCFTCGKVIGNKWDMYLDLLQADYTEGDALDALGLVRYCCRLM 250
MIIPVRCFTCGKVIGNKWD YLDLLQ DYTEGDALDAL LVRYCCR M
Sbjct: 1 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALQLVRYCCRRM 48
Score = 47.4 bits (111), Expect(2) = 3e-26
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 252 LLMTHVDLIEKLLNYNTLEKAENS 323
+LMTHVDLIEKLLNYNTLEK++NS
Sbjct: 48 MLMTHVDLIEKLLNYNTLEKSDNS 71