BLASTX nr result
ID: Paeonia23_contig00003976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00003976
(1146 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256... 343 6e-92
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4... 342 1e-91
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr... 321 3e-85
gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Mor... 312 1e-82
ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prun... 311 3e-82
emb|CBI27823.3| unnamed protein product [Vitis vinifera] 311 4e-82
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu... 310 6e-82
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209... 303 7e-80
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600... 303 9e-80
ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802... 298 4e-78
ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782... 295 3e-77
ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phas... 293 1e-76
ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family pr... 280 8e-73
ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III s... 277 7e-72
ref|XP_004287620.1| PREDICTED: uncharacterized protein LOC101290... 275 2e-71
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu... 254 5e-65
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The... 253 8e-65
ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4... 251 3e-64
gb|AFK44935.1| unknown [Medicago truncatula] 248 4e-63
ref|XP_002873399.1| DNA-directed RNA polymerase III RPC4 family ... 244 5e-62
>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
Length = 289
Score = 343 bits (881), Expect = 6e-92
Identities = 178/297 (59%), Positives = 219/297 (73%), Gaps = 6/297 (2%)
Frame = -1
Query: 1044 AQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVEKKSD 865
A RKV++ PKAP RRV K + V K+EV ED DA +A E++R FNE +KG+PK EKK
Sbjct: 12 AATRKVRFAPKAP-RRVPK-SVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEKKLA 69
Query: 864 HARVAFGYGGSSASIKSYGTPK-----NKYQSPTSSAA-HAGGLREGKEYKEPWDYYSYY 703
+VAFGYGG+SASI+SYGTP+ ++YQ P S + GL + KEYKEPWDYY+YY
Sbjct: 70 PTQVAFGYGGASASIRSYGTPRGATNSSRYQDPASGGGLYGSGLSDHKEYKEPWDYYTYY 129
Query: 702 PVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPA 523
PVTLP+RRPYSGNP +LDEEEF E SES AY+E+ST PA++L L +E++E S+ FLQLPA
Sbjct: 130 PVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQLPA 189
Query: 522 TMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKM 343
TMP +K++A T E+ N KTC L++LP+G MGKMLVY SGAIK+
Sbjct: 190 TMPMIKQAA-------TAEVKEN-----------KTCRLEELPSGFMGKMLVYKSGAIKL 231
Query: 342 KLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
KLGD LYDVSPGLD VFAQD VA+NTE K CC +GEL KRA++TPDVDS L +MDDL
Sbjct: 232 KLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPDVDSALSSMDDL 288
>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
polymerase III subunit RPC4, putative [Theobroma cacao]
Length = 294
Score = 342 bits (878), Expect = 1e-91
Identities = 172/300 (57%), Positives = 225/300 (75%), Gaps = 3/300 (1%)
Frame = -1
Query: 1062 EPDIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPK 883
+ D K PRK+++ PKAPPR+ P VKTEV ED+DA +A+++L+R N+ K +PK
Sbjct: 3 QKDNKTNAPRKMRFAPKAPPRQA--PKLEVKTEVVEDTDAVQARDLLQRLNQTSAKTKPK 60
Query: 882 VEKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSS---AAHAGGLREGKEYKEPWDYY 712
VEKK ++VAFG+GG+SAS+K +G K ++ + H GLRE KEY+EPWDYY
Sbjct: 61 VEKKVASSQVAFGHGGASASMKLFGVSKGASRTSRETLNGVVHTPGLREEKEYREPWDYY 120
Query: 711 SYYPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQ 532
SYYPVTLPMRRPYSGNP LDEEEF SE++ ++E+S +PA++L L +E+ EPS+FFLQ
Sbjct: 121 SYYPVTLPMRRPYSGNPEFLDEEEFA--SENITFDENSVEPAVELGLMDENLEPSMFFLQ 178
Query: 531 LPATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGA 352
LP T+P +K+S +A E+ S+SKP G +KTC L++LPAGLMGKMLV+ SGA
Sbjct: 179 LPPTLPMIKQSGTTAGL----EVDSSSKPAARVGSVKKTCGLEELPAGLMGKMLVHKSGA 234
Query: 351 IKMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
+K+KLGD LYDV+PGL+ VFAQD VAVNT +KQCC VGEL KRA++TPDVDSVL++M DL
Sbjct: 235 VKLKLGDTLYDVTPGLNCVFAQDVVAVNTAEKQCCVVGELDKRAVLTPDVDSVLNSMADL 294
>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
gi|568853572|ref|XP_006480425.1| PREDICTED:
uncharacterized protein LOC102622464 [Citrus sinensis]
gi|557530644|gb|ESR41827.1| hypothetical protein
CICLE_v10012311mg [Citrus clementina]
Length = 303
Score = 321 bits (823), Expect = 3e-85
Identities = 163/296 (55%), Positives = 212/296 (71%), Gaps = 8/296 (2%)
Frame = -1
Query: 1035 RKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNEN--LLKGRPKVEKKSDH 862
RK+KY PKAPPRRV P A VKTE+ E++DA +A ++L+RFN N LKGRPKVEKK
Sbjct: 14 RKIKYAPKAPPRRV--PKAEVKTEMVENADAAQAMDLLQRFNANQGALKGRPKVEKKVAP 71
Query: 861 ARVAFGYGGSSASIKSYGTPKNKYQSP------TSSAAHAGGLREGKEYKEPWDYYSYYP 700
+++AFG GG+S IKSYG PK S + AHA G R GKEY+EPWDYYSYYP
Sbjct: 72 SQIAFGQGGASTFIKSYGIPKGGSSSSRGQGSAVNGGAHASGTRLGKEYQEPWDYYSYYP 131
Query: 699 VTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPAT 520
V+LP+RRPYSG+P +LDEEEF E SE++ Y+E S PA +L L EE+ EP++ FLQLP T
Sbjct: 132 VSLPLRRPYSGSPELLDEEEFGEASETINYDESSMNPAEELGLMEENLEPNMIFLQLPPT 191
Query: 519 MPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMK 340
+P K+ A + ++T +S H+GA EKT SL +LP MGK+LVY SGA+K+K
Sbjct: 192 LPLKKQPATG----NERQVTESSSKHEGATAKEKTSSLSELPGAFMGKLLVYRSGAVKLK 247
Query: 339 LGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
LG+ +Y+V+PG+D +FAQD V +NT +K C GEL+KRAI++PDVD +L+N DL
Sbjct: 248 LGETVYNVTPGMDCMFAQDVVVINTAEKHFCVAGELNKRAILSPDVDFILNNFADL 303
>gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
Length = 328
Score = 312 bits (800), Expect = 1e-82
Identities = 170/325 (52%), Positives = 210/325 (64%), Gaps = 32/325 (9%)
Frame = -1
Query: 1050 KPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVEKK 871
+P PRK ++ PKAPP RV P A VK EV E++DA +A+ +LRRFNE + +PKVEKK
Sbjct: 9 EPDAPRKRRFMPKAPPSRV--PKAEVKAEVVEETDADQARVLLRRFNEGSTRAKPKVEKK 66
Query: 870 SDHARVAFGYGGSSASIKSYGTPKNKYQSP----------TSSA---------------- 769
A+VAFGYGG+S +I+SYG PK Y++ TS+A
Sbjct: 67 VAAAQVAFGYGGASNTIRSYGVPKGGYRNSQGPPATRMLFTSAAFLSTVNKSFPMHDIKN 126
Query: 768 ------AHAGGLREGKEYKEPWDYYSYYPVTLPMRRPYSGNPAILDEEEFREDSESLAYN 607
A G R+ KEYKEPWDYYSYYP TLP RRP+SGNP LDEEEF D+E++ Y+
Sbjct: 127 HVLTDGAFPSGTRQEKEYKEPWDYYSYYPSTLPFRRPHSGNPEFLDEEEFGADTETINYD 186
Query: 606 EDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRSAVSATADSTNEITSNSKPHKGAGP 427
E S K A +L L EE+ E S+ LQLP MP +KRSA +A E T +S A
Sbjct: 187 ETSAKAATELGLVEENPETSMILLQLPPIMPLMKRSANTAAGQ---EATKSSPAPVVAQA 243
Query: 426 SEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCC 247
+ K C+L +LPAG MGKMLVY SGAIK+K+GD LYDVS G+D VF+QD VA+NT +K CC
Sbjct: 244 THKACALHELPAGFMGKMLVYRSGAIKLKIGDTLYDVSSGMDCVFSQDVVAINTVEKHCC 303
Query: 246 TVGELSKRAIITPDVDSVLDNMDDL 172
VGEL KRA ITPDVD +L +M DL
Sbjct: 304 AVGELKKRAAITPDVDFILQSMADL 328
>ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prunus persica]
gi|462400055|gb|EMJ05723.1| hypothetical protein
PRUPE_ppa017748mg [Prunus persica]
Length = 281
Score = 311 bits (797), Expect = 3e-82
Identities = 169/289 (58%), Positives = 209/289 (72%), Gaps = 3/289 (1%)
Frame = -1
Query: 1029 VKYQPKAPPRRVSKPAAVVKTEVK---EDSDATKAKEMLRRFNENLLKGRPKVEKKSDHA 859
+++ PKAP RRV KP VKTEV E+SDA KAKE+L+RFNE + R KVEKK
Sbjct: 1 MRFIPKAP-RRVPKPE--VKTEVDHGAEESDAEKAKELLKRFNEQSSRARLKVEKKVVPT 57
Query: 858 RVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYPVTLPMRR 679
++ FGYGG+S ++KSYG PK S ++A A G++E KEY PWD YSYYPVTLP+R
Sbjct: 58 QIVFGYGGASTTMKSYGAPKGGSASSATNAG-ASGVKEEKEYSSPWDQYSYYPVTLPLRP 116
Query: 678 PYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRS 499
PYSGNP I +EEEF E SE Y+E+ST PA DL L EE++ S+FFLQLP MP++KRS
Sbjct: 117 PYSGNPEIRNEEEFGEGSEESTYDENSTTPANDLGLLEENKATSMFFLQLPPNMPTIKRS 176
Query: 498 AVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYD 319
A TADS E+T +S P GA +K CSL +LPAG MGKMLVY SGA+KMK+GD L+D
Sbjct: 177 A---TADS-QEVTKSSGPPGGARNMQKPCSLSELPAGFMGKMLVYRSGAVKMKIGDSLFD 232
Query: 318 VSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
VSPG++ FAQD V VN +K C +GEL+KRAIITPDVDS+L ++D L
Sbjct: 233 VSPGMNCDFAQDVVVVNKAEKGCGIIGELNKRAIITPDVDSILASIDGL 281
>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 311 bits (796), Expect = 4e-82
Identities = 168/307 (54%), Positives = 209/307 (68%), Gaps = 16/307 (5%)
Frame = -1
Query: 1044 AQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKV----- 880
A RKV++ PKAP RRV K + V K+EV ED DA +A E++R FN +L R
Sbjct: 12 AATRKVRFAPKAP-RRVPK-SVVPKSEVAEDDDAAQANELMRHFNVFILWRRIIFYFFIF 69
Query: 879 -----EKKSDHARVAFGYGGSSASIKSYGTPK-----NKYQSPTSSAA-HAGGLREGKEY 733
+VAFGYGG+SASI+SYGTP+ ++YQ P S + GL + KEY
Sbjct: 70 FLFCSHNCMAPTQVAFGYGGASASIRSYGTPRGATNSSRYQDPASGGGLYGSGLSDHKEY 129
Query: 732 KEPWDYYSYYPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEE 553
KEPWDYY+YYPVTLP+RRPYSGNP +LDEEEF E SES AY+E+ST PA++L L +E++E
Sbjct: 130 KEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQE 189
Query: 552 PSLFFLQLPATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKM 373
S+ FLQLPATMP +K++A + +TC L++LP+G MGKM
Sbjct: 190 ASMLFLQLPATMPMIKQAATA-----------------------ETCRLEELPSGFMGKM 226
Query: 372 LVYSSGAIKMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSV 193
LVY SGAIK+KLGD LYDVSPGLD VFAQD VA+NTE K CC +GEL KRA++TPDVDS
Sbjct: 227 LVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPDVDSA 286
Query: 192 LDNMDDL 172
L +MDDL
Sbjct: 287 LSSMDDL 293
>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
gi|223544779|gb|EEF46295.1| DNA binding protein, putative
[Ricinus communis]
Length = 286
Score = 310 bits (795), Expect = 6e-82
Identities = 165/301 (54%), Positives = 210/301 (69%), Gaps = 8/301 (2%)
Frame = -1
Query: 1050 KPAQ--PRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVE 877
KP Q PRK+KY PKAPPRR KP VK+E ED DAT+A +++++F E ++ +PK E
Sbjct: 4 KPPQDPPRKLKYMPKAPPRRPPKPE--VKSEKAEDEDATQAMKLMKQFQERSMRAKPKAE 61
Query: 876 KKSDHARVAFGYGGSSASIKSYGTPK------NKYQSPTSSAAHAGGLREGKEYKEPWDY 715
KK +++AFG+G +S SIKSY PK + S + A++ L E KEY EPW+Y
Sbjct: 62 KKVQASQIAFGFGAASPSIKSYAAPKVGAAVNHNQGSSVNGGAYSSELGE-KEYIEPWNY 120
Query: 714 YSYYPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFL 535
YSYYPVTLP+RRPYSGNPA L+ EEF E S++ Y+E+ST AI+L L EE+ E ++FFL
Sbjct: 121 YSYYPVTLPLRRPYSGNPATLNAEEFGEASDTSEYDENSTNSAINLGLMEENVEANMFFL 180
Query: 534 QLPATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSG 355
QLP T+P +KR A TAD HK EKTC LD+LPAG MGKMLVY SG
Sbjct: 181 QLPPTVPMIKRLA---TADG----------HKVK--EEKTCKLDELPAGHMGKMLVYRSG 225
Query: 354 AIKMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDD 175
A+K+KLGD LYDVSPGLDF FAQD A+NT +K CC V E+ K AI+TPDVD+++++M D
Sbjct: 226 AVKLKLGDTLYDVSPGLDFAFAQDIAAINTAEKHCCVVAEIDKHAIVTPDVDAIINSMAD 285
Query: 174 L 172
L
Sbjct: 286 L 286
>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
gi|449500539|ref|XP_004161125.1| PREDICTED:
uncharacterized LOC101209454 [Cucumis sativus]
Length = 293
Score = 303 bits (777), Expect = 7e-80
Identities = 153/296 (51%), Positives = 211/296 (71%)
Frame = -1
Query: 1059 PDIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKV 880
P K A PRK+K+ PKAP RR+ KP VK EV ED+DA +A+++L+RFNE+ + + +V
Sbjct: 6 PKNKTAAPRKLKFAPKAPVRRIPKPE--VKAEVAEDADAAQARDLLKRFNESTQRAKQRV 63
Query: 879 EKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYP 700
+K+ +VAFG GGSS++++SYG K + KEY EPWDYYSYYP
Sbjct: 64 GRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPAST--SKEYVEPWDYYSYYP 121
Query: 699 VTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPAT 520
VTLP+RRPYSGNP L+EEEF E SE+L Y+E++T A++L L EE+ E + FLQLP
Sbjct: 122 VTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLPPM 181
Query: 519 MPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMK 340
+P +K+S+ S N +S+ +K + P +KTCS+++LP+G +GK+LVY SGA+K+K
Sbjct: 182 VPMIKQSSSVEDMGSGN----SSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLK 237
Query: 339 LGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
LGD++YDVS G+D FAQ+ A+N E K+CC VGELSKRAI+TPDVDS+L N++DL
Sbjct: 238 LGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNIEDL 293
>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
Length = 283
Score = 303 bits (776), Expect = 9e-80
Identities = 163/286 (56%), Positives = 203/286 (70%)
Frame = -1
Query: 1038 PRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVEKKSDHA 859
PRKV++ PK PPRR K V+ D DA KA+E+++RFNE K + KVEKK
Sbjct: 11 PRKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVKHKVEKKGP-T 69
Query: 858 RVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYPVTLPMRR 679
+VAFGYGGSS+S+KSYG NK S GG R KEY EPWDYY+ YPVTLP+RR
Sbjct: 70 QVAFGYGGSSSSLKSYGH-YNKVSGSMSDGG-IGGERVQKEYTEPWDYYTNYPVTLPVRR 127
Query: 678 PYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRS 499
PYSGNP +LDEEEF E S SL Y+E+S KPA+DL L EES E +F +QLP TMP LK+S
Sbjct: 128 PYSGNPELLDEEEFGEASRSLTYDENSIKPAMDLGLMEESLEEKMFLVQLP-TMPMLKQS 186
Query: 498 AVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYD 319
+ +E+ ++SKP K K CSL++LPAG MGKMLVY SGA+K+KLG+ L++
Sbjct: 187 IKT----EGSEMANSSKPSKA-----KACSLNELPAGFMGKMLVYKSGAVKLKLGETLFN 237
Query: 318 VSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNM 181
+SPG+D FAQD VAVNTE+K C +GEL+KR IITPDVDS+LD++
Sbjct: 238 LSPGMDCSFAQDVVAVNTEEKYCSNIGELTKRIIITPDVDSLLDSI 283
>ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802173 [Glycine max]
Length = 298
Score = 298 bits (762), Expect = 4e-78
Identities = 152/296 (51%), Positives = 208/296 (70%), Gaps = 4/296 (1%)
Frame = -1
Query: 1047 PAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKA--KEMLRRFNE--NLLKGRPKV 880
P PRK K++P+APPRRV K VK EV +D+DA +A + +L+RFNE + +K + KV
Sbjct: 10 PGVPRKPKFKPRAPPRRVIKQE--VKAEVVDDADAEQAAKENLLKRFNERESAMKAKYKV 67
Query: 879 EKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYP 700
EKK +++AFGYGG S S+KSYG P+ + ++ + G +E KEY+EPWDYYS YP
Sbjct: 68 EKKVLASQIAFGYGGESTSMKSYGIPRGGSSININLSSASSGGKE-KEYQEPWDYYSNYP 126
Query: 699 VTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPAT 520
VTLP+RRPYSGNPA+LD+EEF E ++S Y E+++ +DL L EE+ E S+F + LP
Sbjct: 127 VTLPLRRPYSGNPALLDDEEFAEAAQSRTYEENASNSTMDLGLLEENPEASMFLINLPTK 186
Query: 519 MPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMK 340
+P +K+SA + D + S PH G+ E+ C L++L +G MGKMLVY SGAIK+K
Sbjct: 187 LPMIKQSATAGDKD----VNEKSIPHGGSKNVEELCELNELSSGFMGKMLVYKSGAIKLK 242
Query: 339 LGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
LG+ LYDVS G++ AQD VAVNT +K CCT+GE+SK ITPDVD+++DN+ DL
Sbjct: 243 LGNTLYDVSSGMNCACAQDLVAVNTAQKHCCTIGEISKHVTITPDVDAIIDNLSDL 298
>ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782982 [Glycine max]
Length = 318
Score = 295 bits (754), Expect = 3e-77
Identities = 149/295 (50%), Positives = 211/295 (71%), Gaps = 6/295 (2%)
Frame = -1
Query: 1038 PRKVKYQPKAPPRRVSKPA--AVVKTEVKEDSDATKA--KEMLRRFNE--NLLKGRPKVE 877
PRK+K++P+APPRRV K A V +V D+DA A + +L+RF+E + +K + KVE
Sbjct: 13 PRKLKFKPRAPPRRVIKQEVKAEVADDVDVDADAEHAAKENLLKRFHERESAVKAKYKVE 72
Query: 876 KKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYPV 697
KK +++AFGYGG S S+KSYG P+ + ++ + G +E KEY+EPWDY S YPV
Sbjct: 73 KKVLASQIAFGYGGESTSMKSYGIPRGGSSININQSSASNGAKE-KEYQEPWDYDSNYPV 131
Query: 696 TLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATM 517
TLP+RRPYSGNPA+LD++EF E +E AY+E+++ A++LDL E + E S+FF+ LP +
Sbjct: 132 TLPLRRPYSGNPALLDDQEFGEAAEPRAYDENASNSAMELDLLEHNPEASMFFINLPTKL 191
Query: 516 PSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKL 337
P +K+SA + ++D + S+PH G+ E+ C L++L +G MGKMLVY SGAIK+KL
Sbjct: 192 PMIKQSATAGSSD----VNVKSRPHGGSKNVEELCELNELSSGFMGKMLVYKSGAIKLKL 247
Query: 336 GDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
GD LYDVS G+ AQD VA+NT +K CCT+GE+SKR ITPD+D+++DN+ DL
Sbjct: 248 GDTLYDVSSGMKCACAQDLVAINTAQKHCCTIGEISKRVSITPDIDAIIDNLPDL 302
>ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phaseolus vulgaris]
gi|593783109|ref|XP_007154595.1| hypothetical protein
PHAVU_003G132000g [Phaseolus vulgaris]
gi|561027948|gb|ESW26588.1| hypothetical protein
PHAVU_003G132000g [Phaseolus vulgaris]
gi|561027949|gb|ESW26589.1| hypothetical protein
PHAVU_003G132000g [Phaseolus vulgaris]
Length = 291
Score = 293 bits (749), Expect = 1e-76
Identities = 150/299 (50%), Positives = 205/299 (68%), Gaps = 4/299 (1%)
Frame = -1
Query: 1056 DIKPAQP--RKVKYQPKAPPRRVSKPAAVVKTEVKEDS--DATKAKEMLRRFNENLLKGR 889
D +P+ P RK K+ P+APPR V P VK EV ED+ DA +AK++LRRFNE+ +K R
Sbjct: 2 DSEPSAPVRRKHKFAPRAPPRVV--PKKEVKAEVVEDAQADANQAKDLLRRFNESAMKAR 59
Query: 888 PKVEKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYS 709
KVEKK +++AFGYGG S S+KSYG + + + + + E KEY EPWDYYS
Sbjct: 60 NKVEKKVSASQIAFGYGGESTSLKSYGIGRGGRNVNINPNSTSSAVAE-KEYTEPWDYYS 118
Query: 708 YYPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQL 529
YPVTLP+RRPYSGNP +LDEEEF E +E+ Y+E++T A++L L EE+ E ++F ++L
Sbjct: 119 NYPVTLPLRRPYSGNPELLDEEEFGEAAEARTYDEEATNSAMELGLLEENLEANMFLIKL 178
Query: 528 PATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAI 349
P+ +P + +TAD ++ + SKP G E+ C L DLP+G MGKMLVY SG I
Sbjct: 179 PSKLP------IISTADGGKDVNAKSKPPVGTKKGERLCELKDLPSGFMGKMLVYKSGKI 232
Query: 348 KMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
K+KLG+ LYDVS G++ F+QD VA+N +K C++GE+SK ITPD+D +LDN+ DL
Sbjct: 233 KLKLGNTLYDVSSGMNCSFSQDVVAINKAEKTLCSIGEISKHVTITPDIDDILDNLSDL 291
>ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family protein [Populus
trichocarpa] gi|550336350|gb|ERP59439.1| DNA-directed RNA
polymerase 3 RPC4 family protein [Populus trichocarpa]
Length = 292
Score = 280 bits (716), Expect = 8e-73
Identities = 150/296 (50%), Positives = 197/296 (66%), Gaps = 3/296 (1%)
Frame = -1
Query: 1050 KPAQP--RKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVE 877
KP Q RK ++ PKAPPRRV KP VKTE E+ D +A ++++F E LK + E
Sbjct: 4 KPPQDAQRKYRFMPKAPPRRVPKPE--VKTEKVENVDTLQAMNLMKQFQERSLKQKITNE 61
Query: 876 KKSDHARVAFGYGGSSAS-IKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYP 700
KK +AFG G ++ S+ T S ++ A A G RE KEY EPWDYYS YP
Sbjct: 62 KKVQKLDIAFGPGAAATKPFPSWSTINRDQGSSSNGNADAPGPRE-KEYIEPWDYYSNYP 120
Query: 699 VTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPAT 520
V+LPMRRPYSGN AILDEEEF E SE+ Y+E+ST A++L L EE+ E S+ F+QLP T
Sbjct: 121 VSLPMRRPYSGNSAILDEEEFGEVSEAATYDENSTNSAVELGLMEENVEASMLFVQLPPT 180
Query: 519 MPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMK 340
MP +KRSA + E+ +S+P GA EKTC LD+LPAG MGK+LVY SGA+K+K
Sbjct: 181 MPMIKRSATAVGP----EVKESSRPSGGARAIEKTCRLDELPAGYMGKVLVYRSGAVKLK 236
Query: 339 LGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
LGD LYDVSPG++ +FAQD VA+N ++ CC V E+ KR + PDVD+++ + ++
Sbjct: 237 LGDTLYDVSPGMNSIFAQDVVAINRGEETCCVVAEIEKRVTLIPDVDAIISRVAEM 292
>ref|XP_004495578.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Cicer
arietinum]
Length = 298
Score = 277 bits (708), Expect = 7e-72
Identities = 150/303 (49%), Positives = 202/303 (66%), Gaps = 5/303 (1%)
Frame = -1
Query: 1065 MEP--DIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKA---KEMLRRFNENL 901
M+P D KP PRKVK+ PKA PR+V P VK+EV E+ +AT A KE+LRRFNEN
Sbjct: 1 MDPNFDSKPPAPRKVKFAPKALPRKV--PKIEVKSEVAEEDNATAAADAKELLRRFNENA 58
Query: 900 LKGRPKVEKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPW 721
+K R KVEKK +++AFG+GG S S KSY PK++ ++ G++E KEY+EPW
Sbjct: 59 MKARMKVEKKVSASQIAFGFGGESVSRKSYNIPKSESKTSFGENLAFNGVKE-KEYQEPW 117
Query: 720 DYYSYYPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLF 541
D S YP+ LP+R+PYSG+P L+EEEF E + + Y+E + A++L L EE+ E S F
Sbjct: 118 DMNSNYPIALPLRKPYSGDPEYLNEEEFGEAAITRTYDESKSNSAMELGLLEENPEASAF 177
Query: 540 FLQLPATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYS 361
F++LP +P +K A + + D E + + KG G K L++LP GLMGKMLVY
Sbjct: 178 FIKLPPVVPMIKNPAKAGSQD-VKENSKRPRVSKGVG---KLYKLNELPPGLMGKMLVYK 233
Query: 360 SGAIKMKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNM 181
SGA+K+KLG+ LYDVS G+D FAQD A+NT +K C +GE++K A ITPDVD+ LD +
Sbjct: 234 SGAVKLKLGNTLYDVSSGMDCSFAQDYAAMNTAEKHCSIIGEITKHATITPDVDAALDCL 293
Query: 180 DDL 172
DL
Sbjct: 294 KDL 296
>ref|XP_004287620.1| PREDICTED: uncharacterized protein LOC101290984 [Fragaria vesca
subsp. vesca]
Length = 286
Score = 275 bits (704), Expect = 2e-71
Identities = 148/294 (50%), Positives = 202/294 (68%), Gaps = 5/294 (1%)
Frame = -1
Query: 1038 PRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAKEMLRRFNENLLKGRPKVEKKSDHA 859
PRK ++ P+A P++ KP E ++ S A K +E+LRRF+E L+ RPK EKK
Sbjct: 12 PRKRRFIPRARPKQEVKPDP---EEEEQASYAEKERELLRRFHEQSLRARPKNEKKEKPV 68
Query: 858 RVAFGYGG-SSASIKSYGTPKNKYQSPTSSAAHAGGL----REGKEYKEPWDYYSYYPVT 694
VAFG GG SS++++SYG P+ + GGL +E KEYK P+D Y +YPV+
Sbjct: 69 EVAFGSGGQSSSTLRSYGAPRG---------VNGGGLNPVIQEEKEYKSPFDIYGHYPVS 119
Query: 693 LPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMP 514
LP+R+P S +PAIL+++EF + SE Y+E++T A DLDL EE+ S+FFL LP T+P
Sbjct: 120 LPLRQPSSEDPAILNQQEFGDGSEESTYDENATPAADDLDLREENRATSMFFLHLPPTLP 179
Query: 513 SLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLG 334
LK+ A ++ ++S GA +EK CSL DLPAG MGKMLVY SGAIKMKLG
Sbjct: 180 MLKQPA-------GQQVNNSSGAPGGARNTEKPCSLGDLPAGFMGKMLVYRSGAIKMKLG 232
Query: 333 DMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
D LYDVS G++ FAQD VA+NT +K+CCT+GEL+KRA++TPD+DSVL++++DL
Sbjct: 233 DTLYDVSTGMNCDFAQDVVAINTTEKKCCTIGELNKRAVVTPDIDSVLNSLEDL 286
>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
gi|223550094|gb|EEF51581.1| DNA binding protein, putative
[Ricinus communis]
Length = 328
Score = 254 bits (649), Expect = 5e-65
Identities = 150/329 (45%), Positives = 201/329 (61%), Gaps = 37/329 (11%)
Frame = -1
Query: 1047 PAQPRKVKYQPKAPPRRVSKPAAVVKTEVK----EDSDATKAKEMLRRFNENLLKGRPKV 880
P+Q RKVK+ PKAP +R + V KTEV + +A +A++++R+FNEN + P+V
Sbjct: 8 PSQ-RKVKFTPKAPSQRRPR-RTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFRRQGPRV 65
Query: 879 EKKSDHARVAFGYGG-SSASIKSYGTPKNKYQSPTSSAAH-------------------- 763
EKKS +VAFG G SS SI+++G K ++P SS
Sbjct: 66 EKKST-VQVAFGPGATSSTSIRTFGVSKG--ENPVSSGIKDSTDDDGKIVISSLSTDKED 122
Query: 762 -----------AGGLREGKEYKEPWDY-YSYYPVTLPMRRPYSGNPAILDEEEFREDSES 619
A L+ K+Y+EPWDY +YYP TLP+RRPYSG+P +LDE EF E +
Sbjct: 123 EIINCASEDIDALPLKIKKDYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEAEFGEAARK 182
Query: 618 LAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRSAVSATADSTNEITSNSKPHK 439
L Y+E + PA DL+L EE + + F QLPA +P +KRSA + E S P +
Sbjct: 183 LEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSASA----KGKEKAEGSIPSQ 238
Query: 438 GAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYDVSPGLDFVFAQDAVAVNTEK 259
G ++K SLD L AG MGKMLVY SGA+K+KLGD LYDVS G D +FAQD +A+NT
Sbjct: 239 GKNAAKKESSLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAA 298
Query: 258 KQCCTVGELSKRAIITPDVDSVLDNMDDL 172
K CCT+GEL KRA++TPDVDS+LD++ +L
Sbjct: 299 KHCCTIGELEKRAVVTPDVDSLLDSVVNL 327
>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508775585|gb|EOY22841.1| DNA binding protein, putative
isoform 2 [Theobroma cacao]
Length = 328
Score = 253 bits (647), Expect = 8e-65
Identities = 142/333 (42%), Positives = 203/333 (60%), Gaps = 35/333 (10%)
Frame = -1
Query: 1065 MEPDIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVK-EDSDATKAKEMLRRFNENLLKGR 889
M+ D + RKV++ PKAP V K+EV ED +A +A+ +L RFNEN + R
Sbjct: 1 MDQDGPSSGRRKVRFAPKAPQSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTRQR 60
Query: 888 PKVEKKSDHARVAFGYGGSSASI-KSYGTPK---------NKYQSP-------------- 781
PKVEKKS A+++FG G S+++ ++YG+ + ++ +SP
Sbjct: 61 PKVEKKSS-AQISFGPGAPSSNLLRAYGSQRGGTSGKSTDSRQRSPDDNDGQIIGSFPSA 119
Query: 780 ---------TSSAAHAGGLREGKEYKEPWDYY-SYYPVTLPMRRPYSGNPAILDEEEFRE 631
+S A A + +EY+EPWDY+ +YYP+TLP+RRPYSG+P +LD+ EF E
Sbjct: 120 SKEDRTDICSSDAIEASAPKIKREYREPWDYHHTYYPITLPLRRPYSGDPELLDQAEFVE 179
Query: 630 DSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRSAVSATADSTNEITSNS 451
+ Y+E + PA DL L EE E+ +FF QLPA +P +KR A + + + S+
Sbjct: 180 AARK-EYDEKTINPASDLGLLEEGEKGKMFFFQLPANLPVIKRLASTKGKEKAENLGSSE 238
Query: 450 KPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYDVSPGLDFVFAQDAVAV 271
+ G +K C L++LP G MGKMLVY SGA+K+KLG+ LYDVSPG D +FAQD AV
Sbjct: 239 R----FGALKKGCQLEELPGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAV 294
Query: 270 NTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
NT +K CC +GEL KR ++TPD+ SVL+++ DL
Sbjct: 295 NTTEKHCCVIGELGKRVVVTPDISSVLNSVIDL 327
>ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4 [Medicago truncatula]
gi|355480022|gb|AES61225.1| DNA-directed RNA polymerase
III subunit RPC4 [Medicago truncatula]
Length = 288
Score = 251 bits (642), Expect = 3e-64
Identities = 137/298 (45%), Positives = 191/298 (64%), Gaps = 3/298 (1%)
Frame = -1
Query: 1056 DIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAK---EMLRRFNENLLKGRP 886
D KP Q RK+K+QPKAPPRRV P VK+EV E+ + +K ++L+R NEN + R
Sbjct: 6 DSKPPQRRKLKFQPKAPPRRV--PKVEVKSEVIEEDNKDVSKVTMDLLQRHNENAMNRRM 63
Query: 885 KVEKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSY 706
K EKK +++AFG GG S +KSYGT K S + ++A G KEYKEPW+ +
Sbjct: 64 KHEKKVLPSQIAFGAGGQSTYLKSYGT---KGGSKSENSAFYGVTE--KEYKEPWELDTE 118
Query: 705 YPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLP 526
YP+ P+R+PYSGNP LDE+EF E +ES Y+E + A++LDL EE+ E S FF++LP
Sbjct: 119 YPIVHPLRKPYSGNPEKLDEKEFGETAESRTYDESAASSAVELDLLEENPEASAFFMKLP 178
Query: 525 ATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIK 346
+P +K+ + K G + K C L+DLP GL+GKMLVY SG +K
Sbjct: 179 PVIPMIKKP----------DADGKDKRPGGYRGAAKLCRLNDLPPGLIGKMLVYKSGKVK 228
Query: 345 MKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
+KLG+ LYDVS G++ +FAQ+ A+NT +K C +GE++K A +TPD+D+ LD + DL
Sbjct: 229 LKLGNTLYDVSSGMNCIFAQEFAAINTAQKFCSALGEINKFATVTPDIDAALDCLSDL 286
>gb|AFK44935.1| unknown [Medicago truncatula]
Length = 288
Score = 248 bits (632), Expect = 4e-63
Identities = 136/298 (45%), Positives = 190/298 (63%), Gaps = 3/298 (1%)
Frame = -1
Query: 1056 DIKPAQPRKVKYQPKAPPRRVSKPAAVVKTEVKEDSDATKAK---EMLRRFNENLLKGRP 886
D KP Q RK+K+QPKAPPRRV P VK+EV E+ + +K ++L+R NEN + R
Sbjct: 6 DSKPPQRRKLKFQPKAPPRRV--PKVEVKSEVIEEDNKDVSKVTMDLLQRHNENAMNRRM 63
Query: 885 KVEKKSDHARVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSY 706
K EKK +++AFG GG S +KSYGT K S + ++A G KEYKEPW+ +
Sbjct: 64 KHEKKVLPSQIAFGAGGQSTYLKSYGT---KGGSKSENSAFYGVTE--KEYKEPWELDTE 118
Query: 705 YPVTLPMRRPYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLP 526
YP+ P+R+PYSGNP LDE+EF E +ES Y+E + A++LDL EE+ E S FF++LP
Sbjct: 119 YPIVHPLRKPYSGNPEKLDEKEFGETAESRTYDESAASSAVELDLLEENPEASAFFMKLP 178
Query: 525 ATMPSLKRSAVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIK 346
+P +K+ + K G + K C L+DLP GL+GKMLVY SG +K
Sbjct: 179 PVIPMIKKP----------DADGKDKRPGGYRGAAKLCRLNDLPPGLIGKMLVYKSGKVK 228
Query: 345 MKLGDMLYDVSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
+KLG+ LYDVS G++ +FAQ+ A+NT +K C +GE++K A +T D+D+ LD + DL
Sbjct: 229 LKLGNTLYDVSSGMNCIFAQEFAAINTAQKFCSALGEINKFATVTLDIDAALDCLSDL 286
>ref|XP_002873399.1| DNA-directed RNA polymerase III RPC4 family protein [Arabidopsis
lyrata subsp. lyrata] gi|297319236|gb|EFH49658.1|
DNA-directed RNA polymerase III RPC4 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 271
Score = 244 bits (623), Expect = 5e-62
Identities = 139/289 (48%), Positives = 190/289 (65%), Gaps = 1/289 (0%)
Frame = -1
Query: 1035 RKVKYQPKAPPRRVSKPAAVVKTEVKE-DSDATKAKEMLRRFNENLLKGRPKVEKKSDHA 859
RK+K+ PKAPP+RV KP VK EV E DS++ +A E+LRR NE L+ +PK +KK +
Sbjct: 8 RKMKFAPKAPPKRVPKPE--VKPEVVENDSNSAQALELLRRVNERSLR-KPKADKKVPAS 64
Query: 858 RVAFGYGGSSASIKSYGTPKNKYQSPTSSAAHAGGLREGKEYKEPWDYYSYYPVTLPMRR 679
RVA+ GG S T NKY S ++ A + +E EYKEPWDYYSYYP+TLPMRR
Sbjct: 65 RVAW-MGGVVNS-----TTSNKYLSGSNGAYGSTSTQE-IEYKEPWDYYSYYPITLPMRR 117
Query: 678 PYSGNPAILDEEEFREDSESLAYNEDSTKPAIDLDLTEESEEPSLFFLQLPATMPSLKRS 499
PY+G+P +LD EEF + + + +EDS A +L L E+S E + F++LP+
Sbjct: 118 PYAGDPEVLDVEEFMQAAGN---HEDSLNTAANLGLMEDSGEQKMLFMRLPSV------- 167
Query: 498 AVSATADSTNEITSNSKPHKGAGPSEKTCSLDDLPAGLMGKMLVYSSGAIKMKLGDMLYD 319
+++T E N + GP +KT L LP G MGK+LVY SGA+KMKLG++LYD
Sbjct: 168 PLASTPTENRETKPNIR-----GPVQKTVDLKALPEGFMGKLLVYKSGAVKMKLGEVLYD 222
Query: 318 VSPGLDFVFAQDAVAVNTEKKQCCTVGELSKRAIITPDVDSVLDNMDDL 172
VSPGL FAQD + VNTE+K CC VG++ K A++TPD+DS+L N++++
Sbjct: 223 VSPGLKSEFAQDVMVVNTEQKNCCLVGDVYKHAVLTPDIDSILKNIENI 271