BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00003512
         (2599 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   938   0.0  
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   922   0.0  
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   915   0.0  
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              913   0.0  
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   893   0.0  
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   889   0.0  
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   856   0.0  
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   851   0.0  
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...   842   0.0  
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   826   0.0  
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...   821   0.0  
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...   793   0.0  
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...   793   0.0  
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra...   790   0.0  
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra...   787   0.0  
ref|XP_007153353.1| hypothetical protein PHAVU_003G028300g [Phas...   785   0.0  
ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Caps...   731   0.0  
gb|EYU29949.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus...   728   0.0  
ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arab...   724   0.0  
ref|NP_173925.3| mediator of RNA polymerase II transcription sub...   723   0.0  

>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  938 bits (2425), Expect = 0.0
 Identities = 495/694 (71%), Positives = 544/694 (78%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQL++AVEGTAAMGPYWQ +VSDY++KIIR FCGNEL GQKPS+ NFELSLVMFNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY + LVQR+GWTRD+D+FLQWLSA+PFAGGGF+D AIAEGLAEALMMFS+A NG QT 
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AA+NP PLPTPVYQP MQN+EQ E+ E QTESRLSDAE +AK FAQCS
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKL++IY+AGKRNP  ADPPVD VKN  FLVLIS++FMEARAALSRPG+
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            +N+  NQSPVKMDIAS               NG IM+R  I VG +PTATVK+EPST TS
Sbjct: 241  SNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTS 299

Query: 1133 MVSGPVFSHVPSVVRA---GVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTRPL 1300
            + SGP F H+PSV RA   GVPS+QTSSPS+ SQEMIS+GDNV + KP+V+ ISQ+ RP+
Sbjct: 300  ITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPV 359

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              PAAANVSILNNLSQARQVM+S AL+GGTS+GLQSM GT MAMHMSNMISSGMASSVPA
Sbjct: 360  -VPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPA 418

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
             Q VF                   AQV QNSALGSFTSAT            QPL NL G
Sbjct: 419  TQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNLQG 478

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
             VSMGQ+VPGMSQGNL G QM     GMNQNM+SGLGPS +SSG GTMIPT         
Sbjct: 479  GVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQP 538

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEGNLSGQRQGQPVFITRLEGYR+A
Sbjct: 539  GMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 598

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASE+LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 599  SASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 658

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 659  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 692


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  922 bits (2383), Expect = 0.0
 Identities = 488/694 (70%), Positives = 533/694 (76%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            M+EKQLI+AVEGTAAMGPYWQ+IVSDY+EKIIRCFC NEL GQK SA N ELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY A LVQR+GWT+D+DIFL WLS +PFAGGGF+D AIAEGL+EALMMFS+A NG Q  
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AASNP+PLPTPVY+P MQNL+Q ENNE Q ESRLSDAET+AK F QCS
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKL AIY+A KRNP AADPPVD  KN  FLVLISENFMEARAALSRPG+
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
             NLAPNQ+PVKMDIA                NG  ++R PI VGN+PTATVK+EPST TS
Sbjct: 241  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 298

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTRPL 1300
            MV+GP F H+PSV R    GVPS+QTSSPS+ SQEMI+SGD+VPE KP+V+ +SQ  RP+
Sbjct: 299  MVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 358

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              PAAANV+ILNNLSQARQVMN+ ALTGGTS+GLQSM  TPMAMHMSNMISSGMASSVP 
Sbjct: 359  -APAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 417

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
            +Q VF                   +QV QNS L SFTSA             QP+G L G
Sbjct: 418  SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 477

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
              SMGQSV GMSQGN SG QM      MNQNM+SGLGPS VSSG GTMIPT         
Sbjct: 478  GASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQS 536

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEG+LSGQRQGQPVFIT+LEGYR+A
Sbjct: 537  GMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSA 596

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 597  SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 656

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 657  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  915 bits (2366), Expect = 0.0
 Identities = 487/694 (70%), Positives = 532/694 (76%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            M+EKQLI+AVEGTAAMGPYWQ+IVSDY+EKIIRCFC NEL GQ  SA N ELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY A LVQR+GWT+D+DIFL WLS +PFAGGGF+D AIAEGL+EALMMFS+A NG Q  
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AASNP+PLPTPVY+P MQNL+Q ENNE Q ESRLSDAET+AK F QCS
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKL AIY+A KRNP AADPPVD  KN  FLVLISENFMEARAALSRPG+
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGV 239

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
             NLAPNQ+PVKMDIA                NG  ++R PI VGN+PTATVK+EPST TS
Sbjct: 240  ANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTATVKVEPSTVTS 297

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTRPL 1300
            MV+GP F H+PSV R    GVPS+QTSSPS+ SQEMI+SGD+VPE KP+V+ +SQ  RP+
Sbjct: 298  MVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQPLRPM 357

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              PAAANV+ILNNLSQARQVMN+ ALTGGTS+GLQSM  TPMAMHMSNMISSGMASSVP 
Sbjct: 358  -APAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSVPT 416

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
            +Q VF                   +QV QNS L SFTSA             QP+G L G
Sbjct: 417  SQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTLQG 476

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
              SMGQSV GMSQGN SG QM      MNQNM+SGLGPS VSSG GTMIPT         
Sbjct: 477  GASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQQAQS 535

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEG+LSGQRQGQPVFIT+LEGYR+A
Sbjct: 536  GMQPLSVNNNTAVNMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSA 595

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 596  SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 655

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 656  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 689


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  913 bits (2360), Expect = 0.0
 Identities = 486/694 (70%), Positives = 535/694 (77%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQL++AVEGTAAMGPYWQ +VSDY++KIIR FCGNEL GQKPS+ NFELSLVMFNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY + LVQR+GWTRD+D+FLQWLSA+PFAGGGF+D AIAEGLAEALMMFS+A NG QT 
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AA+NP PLPTPVYQP MQN+EQ E+ E QTESRLSDAE +AK FAQCS
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKL++IY+AGKRNP  ADPPVD VKN  FLVLIS++FMEARAALSRPG+
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            +N+  NQSPVKMDIAS               NG IM+R  I VG +PTATVK+EPST TS
Sbjct: 241  SNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTS 299

Query: 1133 MVSGPVFSHVPSVVRA---GVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTRPL 1300
            + SGP F H+PSV RA   GVPS+QTSSPS+ SQEMIS+GDNV + KP+V+ ISQ+ RP+
Sbjct: 300  ITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPV 359

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              PAAANVSILNNLSQARQVM+S AL+GGTS+GLQSM GT MAMHMSNMISSGMASSVPA
Sbjct: 360  -VPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPA 418

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
             Q VF                   AQV QNSALGSFTSAT            QPL     
Sbjct: 419  TQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPL----- 473

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
                   +PGMSQGNL G QM     GMNQNM+SGLGPS +SSG GTMIPT         
Sbjct: 474  -------IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQP 526

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEGNLSGQRQGQPVFITRLEGYR+A
Sbjct: 527  GMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 586

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASE+LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 587  SASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 646

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 647  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 680


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  893 bits (2307), Expect = 0.0
 Identities = 474/694 (68%), Positives = 526/694 (75%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAE+QLI+AVEGTAAMGPYWQT+VSDY++KIIRCF  +EL GQK S  N EL+LV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY A LVQR+GWT+D+DIFLQWLSA+PF+GGGF+D AIAEGL+EALMMF IA NG QT 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AASNP PLPTPVY+P +QNLEQ EN E QTESRLSDAET+AK FAQCS
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQL KL+ IY AGKRNP A DPPVD V+N  FLVLISENFME RAALSRPG+
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
             +LA NQSPVKMD+AS               NGS+MSRQP+ VGN+PTAT+K+EP+T TS
Sbjct: 241  PSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIKVEPTTITS 300

Query: 1133 MVSGPVFSHVPSVVRA---GVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M +GP F H+P+V RA    +P+MQTSSPS  SQE+++SGDNV E KP V+ ++Q  RP+
Sbjct: 301  MGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLRPV 360

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              P AANV+ILNNLSQAR VMNS ALTGGTS+GL SM  TP+AMHMSNMISSGMASSVP 
Sbjct: 361  --PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVPP 417

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
            AQ VF                    QV  NS L SF SAT            QP+GN+  
Sbjct: 418  AQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQS 477

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
             VSMGQSVPGMSQGN SGAQM     GM+QNM SGLGPS+VSSG GTM P          
Sbjct: 478  GVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGTMFPIPGMSQQVQS 536

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEGNLSGQRQGQPVFITRLEGYR+A
Sbjct: 537  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 596

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASETLAA+WP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 597  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 656

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 657  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  889 bits (2296), Expect = 0.0
 Identities = 474/694 (68%), Positives = 526/694 (75%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAE+QLI+AVEGTAAMGPYWQT+VSDY++KIIRCF  +EL GQK S  N EL+LV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY A LVQR+GWT+D+DIFLQWLSA+PF+GGGF+D AIAEGL+EALMMF IA NG QT 
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+G +HCIL+AASNP PLPTPVY+P +QNLEQ EN E QTESRLSDAET+AK FAQCS
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQL KL+ IY AGKRNP A DPPVD V+N  FLVLISENFME RAALSRPG+
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGV 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
             +LA NQSPVKMD+AS               NGS+MSRQP+ VGN+PTAT+K+EP+T TS
Sbjct: 241  PSLASNQSPVKMDMAS-----------VTSVNGSMMSRQPVSVGNVPTATIKVEPTTITS 289

Query: 1133 MVSGPVFSHVPSVVRA---GVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M +GP F H+P+V RA    +P+MQTSSPS  SQE+++SGDNV E KP V+ ++Q  RP+
Sbjct: 290  MGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQPLRPV 349

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              P AANV+ILNNLSQAR VMNS ALTGGTS+GL SM  TP+AMHMSNMISSGMASSVP 
Sbjct: 350  --PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVPP 406

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
            AQ VF                    QV  NS L SF SAT            QP+GN+  
Sbjct: 407  AQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQS 466

Query: 1661 SVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
             VSMGQSVPGMSQGN SGAQM     GM+QNM SGLGPS+VSSG GTM P          
Sbjct: 467  GVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGTMFPIPGMSQQVQS 525

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVKVWEGNLSGQRQGQPVFITRLEGYR+A
Sbjct: 526  GMQTLGVSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSA 585

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SASETLAA+WP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 586  SASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 645

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 646  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 679


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
            gi|550332870|gb|EEE88812.2| hypothetical protein
            POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  856 bits (2211), Expect = 0.0
 Identities = 463/702 (65%), Positives = 515/702 (73%), Gaps = 17/702 (2%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MA+KQLI+AVEGTAAMGP+W  IVSDY+EKIIRC+CGNE +GQKP   + ELSLV FN+H
Sbjct: 1    MADKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSYSA LVQR+GWTRD+DIFL WLSA+PFAGGGF+D AIAEGL+EALMMF I  NG QT 
Sbjct: 61   GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
             N +G ++CILIAASNP+PLPTPVY+P +QNLEQ EN + Q ESRLSDAET+AK F QCS
Sbjct: 121  PNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKLR IY+AGKRN  AADPPVD +KN  FLVLISENFMEARAALSRPG 
Sbjct: 181  VSLSVICPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGA 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T+L  NQ+PVK+DIAS               NGSI +R PI VGN+PTATVK+EPST TS
Sbjct: 241  TSLPSNQTPVKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITS 300

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M +G  F H+ SV R    GVPSMQTSSPS  +Q+M ++G+N  + KP V+  +QS R  
Sbjct: 301  MANGSAFPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQSARS- 359

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
              PAAANV+ILNNLSQARQVMNS AL+GGTS+GL S++ T +AMHMS+MISSGM SSVPA
Sbjct: 360  APPAAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSSVPA 419

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSAT-XXXXXXXXXXXXQPLGNLH 1657
            AQ VF                    Q+T NS LGSFTSAT             QP+GNLH
Sbjct: 420  AQTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGNLH 479

Query: 1658 GSVSMGQSV-------PGMSQGNLSGAQ-----MGMNQNMISGLGPSSVSSGNGTMIPTX 1801
              VS+ QS        P    G  SGAQ     MG N N +SGLG S VSSG+ TMIPT 
Sbjct: 480  AGVSISQSAMSGLGTNPNTMSG--SGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPTP 537

Query: 1802 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFIT 1981
                                                  KYVKVWEGNLSGQRQGQPVFIT
Sbjct: 538  GMSQQVQSGMQPLGANNNSAANLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFIT 597

Query: 1982 RLEGYRNASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 2161
            RLEGYR+ASASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ
Sbjct: 598  RLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQ 657

Query: 2162 EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 658  EKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 699


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
            gi|222864996|gb|EEF02127.1| PHYTOCHROME AND FLOWERING
            TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  851 bits (2199), Expect = 0.0
 Identities = 462/695 (66%), Positives = 513/695 (73%), Gaps = 10/695 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQLI+AVEGTAAMGP+W  IVSDY+EKIIR          K      ELS+V FN+H
Sbjct: 1    MAEKQLIVAVEGTAAMGPFWSIIVSDYLEKIIR---------YKVPTSIVELSIVTFNSH 51

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSYSA LVQR+GWTRD+DIFLQWLSA+PFAGGGF+D AIAEGL+EALMMF I  NG QT 
Sbjct: 52   GSYSACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPIDPNGSQTQ 111

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
             N++  ++CILIAASNP+PLPTPVY+P +QNLEQ EN + Q ESRLSDAET+AK F QCS
Sbjct: 112  SNIDEQRNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCS 171

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLS+ICPKQLPKLR+IY+AGKRN  AADPPVD VKN  FLVLISENFMEARAALS PG+
Sbjct: 172  VSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALSLPGV 231

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T+L  NQ+PVK+DIAS               NGSI +R  I VGN+PTATVK+EPST TS
Sbjct: 232  TSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPSTITS 291

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M +GP F H PSV R    GVP +QTSSPS  +Q+M +SGD+V + KP V+ ++QS RP 
Sbjct: 292  MANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKPNVSVMTQSARP- 350

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
            G PAAANVSILNN+SQARQVMNS  L+GGTS+GL S++ T +AMHMSNMISSGMASSVPA
Sbjct: 351  GPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSGMASSVPA 410

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSAT-XXXXXXXXXXXXQPLGNLH 1657
            A  VF                    Q+  NS LGSFTSAT             QP+GNL 
Sbjct: 411  APTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISQPMGNLQ 470

Query: 1658 GSVSMGQSVPGMSQGNLSGAQ-----MGMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXX 1822
              VS+GQS PGMSQGN+SGAQ     MG N N +SGLGPS VSSG  TMIPT        
Sbjct: 471  AGVSIGQSAPGMSQGNISGAQMVQSGMGANPNTMSGLGPSGVSSGLNTMIPTPGMSQQVQ 530

Query: 1823 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRN 2002
                                           KYVKVWEGNLSGQRQGQPVFITRLEGYR+
Sbjct: 531  SGMQPLGANNNSADNLSMSQQTAGGLQPPQSKYVKVWEGNLSGQRQGQPVFITRLEGYRS 590

Query: 2003 ASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 2182
            ASASETLAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV
Sbjct: 591  ASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 650

Query: 2183 IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 651  IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 685


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score =  842 bits (2174), Expect = 0.0
 Identities = 454/694 (65%), Positives = 509/694 (73%), Gaps = 7/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQLI+ VEGTAAMGPYW  +VSDY+EK+IR   GNEL+GQKPS+   E+SLV FN H
Sbjct: 1    MAEKQLIVVVEGTAAMGPYWPAVVSDYVEKVIRSLSGNELSGQKPSSSTVEMSLVTFNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSYS  LVQRTGWTRDI++FLQWLSA+P AGGGFSD AIAEGL+EALMMF   QNG Q  
Sbjct: 61   GSYSGCLVQRTGWTRDIELFLQWLSAIPLAGGGFSDAAIAEGLSEALMMFPTIQNGGQNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNV+  KHCIL+AASNP+PLPTPVY+P MQN+EQ EN + QTESRL DAE +AK F QCS
Sbjct: 121  QNVDFQKHCILVAASNPHPLPTPVYRPQMQNVEQSENFDAQTESRLYDAEAVAKSFPQCS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKLRAIY+AGKRNP A DPP+D VKN  FLVLISENF+EARA LSRPG 
Sbjct: 181  VSLSVICPKQLPKLRAIYNAGKRNPRAEDPPIDNVKNPHFLVLISENFIEARATLSRPGS 240

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T L    SPVKMDIA                NGS+M+R    VGN+P ATVK+EPST +S
Sbjct: 241  TTLPSIPSPVKMDIAPVASVTGPPPTSMPSVNGSVMNRPSFSVGNVPPATVKVEPSTVSS 300

Query: 1133 MVSGPVFSHVPSV--VRAGVPSMQTSSPSASQEMISSGDNVPESKPMVNNISQSTRPLGG 1306
            MV+GP F+HVPSV     GVP++QTSSPS S EM ++ ++VP+ KP+V+ ++   RP+G 
Sbjct: 301  MVAGPAFAHVPSVRPPSQGVPTLQTSSPS-SGEMNTNNESVPDLKPIVSGVTHQLRPVG- 358

Query: 1307 PAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPAAQ 1486
                  SILNN+SQAR VMNS AL+GGTS+GLQ+M   PMAMH+SNMISSGMASSV AAQ
Sbjct: 359  ------SILNNISQAR-VMNSAALSGGTSIGLQNMGQNPMAMHVSNMISSGMASSVAAAQ 411

Query: 1487 NVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHGSV 1666
            NVF                    QV Q+S L +FTSAT            QP+ NL G V
Sbjct: 412  NVF-----------SSSAPHTLTQVPQSSGLNTFTSATSNVSGNSNLGMSQPMSNLQGGV 460

Query: 1667 SMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXXXX 1831
            S+GQSVPGM+Q NLSG QM     GMN NM+SG G +  SSG GTMIPT           
Sbjct: 461  SIGQSVPGMNQ-NLSGPQMVQNGIGMNPNMMSGHGSAGSSSGTGTMIPT-PGISQQAQSG 518

Query: 1832 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNASA 2011
                                        KYVKVWEGNLSGQRQGQPVFITRLEGYR+ASA
Sbjct: 519  IQSLGANNSSISNPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASA 578

Query: 2012 SETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQL 2191
            SETLAANWPP MQIVRLISQDHMNNKQYVG+ADFLVFRAMNQHGFLGQLQEKKLCAVIQL
Sbjct: 579  SETLAANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKKLCAVIQL 638

Query: 2192 PSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPG 2293
            PSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ+ G
Sbjct: 639  PSQTLLLSVSDKACRLIGMLFPGDMVVFKPQVGG 672


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Cucumis sativus]
          Length = 858

 Score =  826 bits (2133), Expect = 0.0
 Identities = 443/694 (63%), Positives = 505/694 (72%), Gaps = 9/694 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MA+KQLI+ VEGTAAMGP+WQT+VSDYIEKI+R FCGNEL GQKP   N E SLV F+ H
Sbjct: 1    MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSY   LVQRTGWTRD+DIF+QWLSA+PF+GGGFSD AIAEGLAEALMMF    NG Q  
Sbjct: 61   GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            Q ++  KHCIL+AASNP PLPTPVY+P +QNLEQ +N  V+  S  S AET+AK F QC 
Sbjct: 121  QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDN--VEPGSSQSYAETVAKSFPQCF 178

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            +SLSVICPKQLPKL+AIY AGKRNP AADPP+D VK+  +LVLISENF+EARAALSRPGI
Sbjct: 179  ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T+L  NQSPVKMDI+S               NG I++RQP+ V N PTATVK+EP+T TS
Sbjct: 239  TSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTS 298

Query: 1133 MVSGPVF-SHVPSVVRA---GVPSMQTSSPSASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M +G  +  H+PSVVRA   GVPS+QTSSP +SQEMI++ +N  + KP+V  + Q  R L
Sbjct: 299  MTNGSGYPPHMPSVVRAASQGVPSLQTSSPLSSQEMITNNENTQDLKPLVTGVPQPVRSL 358

Query: 1301 GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPA 1480
            G    ANVSILNN+SQAR VM++ AL GGTS+GL SM  TP+AMH+SNMISSGM SSVPA
Sbjct: 359  G---PANVSILNNISQAR-VMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPA 414

Query: 1481 AQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHG 1660
            AQNVF                   +QV  NS + S TS              Q +GNL G
Sbjct: 415  AQNVF---SSGQSGMTSINGSSTLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQG 471

Query: 1661 SVSMGQSVPGMSQGNLSGAQ-----MGMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXX 1825
            SVS+ QSVPG+SQGNL+G Q     +G++QN++S L    VSSGNGTMIPT         
Sbjct: 472  SVSVSQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQN 531

Query: 1826 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNA 2005
                                          KYVK WEGNLSGQRQGQPVFITR+EGYR+A
Sbjct: 532  GMHSLGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQPVFITRMEGYRSA 591

Query: 2006 SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 2185
            SAS+ LAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI
Sbjct: 592  SASDKLAANWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVI 651

Query: 2186 QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI
Sbjct: 652  QLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 685


>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum tuberosum]
          Length = 819

 Score =  821 bits (2121), Expect = 0.0
 Identities = 448/691 (64%), Positives = 503/691 (72%), Gaps = 9/691 (1%)
 Frame = +2

Query: 245  QLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAHGSYS 424
            +LI+AVEGTAA+GPYW+TIVSDY++KIIRCF G +   QK SA + E+SLVMFN HGSYS
Sbjct: 4    KLIVAVEGTAALGPYWKTIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSLVMFNTHGSYS 63

Query: 425  AFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTHQNVE 604
            A LVQR+GWTRD+D FLQWLSA+PF GGGF+D A+AEGLAEAL+MFS   NG Q+ QN+E
Sbjct: 64   ACLVQRSGWTRDMDTFLQWLSAIPFLGGGFNDAAVAEGLAEALVMFS-GLNGNQSQQNME 122

Query: 605  GHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCSVSLS 784
            G KHCILI+ SNP PLPTPVY+P MQ LEQ EN E QT+SRLSDAET+AK F QCS+SLS
Sbjct: 123  GKKHCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLSDAETVAKAFPQCSISLS 182

Query: 785  VICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGITNLA 964
            V+CPK+LPKLRAIYDAGK NP AADPP+D  KN  FLVLISENF+EARAA SR G+TNLA
Sbjct: 183  VLCPKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGMTNLA 242

Query: 965  PNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATSMVSG 1144
             N SPVKMD++S               N S+MSR PI  GNIP ATVK+EP+T TSM +G
Sbjct: 243  SNHSPVKMDVSSVLPVSGTQSISNSAANVSVMSRPPISAGNIPPATVKIEPNTVTSM-TG 301

Query: 1145 PVFSHVPSVVRA--GVPSMQTSSP-SASQEMISSGDNVPESKPMVNNISQSTRPLGGPAA 1315
            P FSH+PSV  A   VPS+Q SSP S SQEM S  +NV E KP+V+ ++QS RP+   AA
Sbjct: 302  PAFSHIPSVRPALQPVPSLQASSPLSVSQEMASHTENVQEMKPIVSGMTQSLRPVAA-AA 360

Query: 1316 ANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPAAQNVF 1495
            ANV ILN ++QA QV     L GGTS+GLQSM GTPM   +S+MISSGMASSVPA+Q V 
Sbjct: 361  ANVKILNGVAQAHQV-----LGGGTSIGLQSMGGTPM---LSSMISSGMASSVPASQAVL 412

Query: 1496 XXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHGSVSM- 1672
                               AQ TQNSA  SFTS              QPL N    VSM 
Sbjct: 413  SSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPLNNNQRGVSMT 472

Query: 1673 GQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXXXXXX 1837
            GQ+VPGMSQGNL G QM     GMNQNM++GLG + + SG GTM+PT             
Sbjct: 473  GQTVPGMSQGNLPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQP 532

Query: 1838 XXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNASASE 2017
                                      KYVKVWEGNLSGQRQGQPVFITRLEGYR+ASASE
Sbjct: 533  VGVNSTSANMPLSQQQTSAALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASE 592

Query: 2018 TLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPS 2197
            +LAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL QLQEKKLCAVIQLPS
Sbjct: 593  SLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPS 652

Query: 2198 QTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            QTLLLSVSDKACRLIGMLFPGDMVVFKPQIP
Sbjct: 653  QTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 683


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum lycopersicum]
          Length = 805

 Score =  793 bits (2049), Expect = 0.0
 Identities = 434/690 (62%), Positives = 496/690 (71%), Gaps = 8/690 (1%)
 Frame = +2

Query: 245  QLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAHGSYS 424
            +LI+AVEGTA +GPYW+ IVSDY++KIIRCF G +   QK SA + E+S+VMFN HG YS
Sbjct: 4    KLIVAVEGTAVLGPYWKIIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSMVMFNTHGPYS 63

Query: 425  AFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTHQNVE 604
            A LVQR+GWT+D+D FLQWLSA+PF+GGGF+D A+AEGLAEAL+MFS+  NG QT Q +E
Sbjct: 64   ACLVQRSGWTKDMDTFLQWLSAIPFSGGGFNDAAVAEGLAEALVMFSVP-NGNQTQQKME 122

Query: 605  GHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCSVSLS 784
            G KHCILI+ SNP PLPTPVY+P MQ LEQ EN E QT+SRL+DAET+AK F QCS+SLS
Sbjct: 123  GKKHCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLADAETVAKTFPQCSISLS 182

Query: 785  VICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGITNLA 964
            VICPK+LPKLRAIYDAGK NP AADPP+D  KN  FLVLISENF+EARAA SR G+TNLA
Sbjct: 183  VICPKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGLTNLA 242

Query: 965  PNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATSMVSG 1144
             N SPVKMD++S               N S++SR PI  GNIP ATVK+EP+T T M +G
Sbjct: 243  SNHSPVKMDVSSVLPVSGTQSISNSAANVSVISRPPISAGNIPPATVKIEPNTVTPM-TG 301

Query: 1145 PVFSHVPSVVRA--GVPSMQTSSP-SASQEMISSGDNVPESKPMVNNISQSTRPLGGPAA 1315
            P FSH+PSV  A   VPS+Q SSP S SQEM+S  +NV E KP+V+ ++QS RP+   AA
Sbjct: 302  PGFSHIPSVRPALQPVPSLQASSPLSVSQEMVSHTENVQEMKPIVSGMTQSLRPVAA-AA 360

Query: 1316 ANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSVPAAQNVF 1495
            ANV ILN ++QA QV     L GGTS+GLQSM GTPM   +S+MISSGMASSVPA+Q V 
Sbjct: 361  ANVKILNGVAQAHQV-----LGGGTSIGLQSMGGTPM---LSSMISSGMASSVPASQAVL 412

Query: 1496 XXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNLHGSVSMG 1675
                               AQ TQNSA  SFTS                      S+S G
Sbjct: 413  SSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAP-------------------SMS-G 452

Query: 1676 QSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXXXXXXXX 1840
            Q+VP MSQGN+ G QM     GMNQNM++GLG + + SG GTM+PT              
Sbjct: 453  QTVPAMSQGNIPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQPV 512

Query: 1841 XXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRNASASET 2020
                                     KYVKVWEGNLSGQRQGQPVFITRLEGYR+ASASE+
Sbjct: 513  GVNSTSANMPLSQQQTSGALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASES 572

Query: 2021 LAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQ 2200
            LAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL QLQEKKLCAVIQLPSQ
Sbjct: 573  LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQ 632

Query: 2201 TLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            TLLLSVSDKACRLIGMLFPGDMVVFKPQIP
Sbjct: 633  TLLLSVSDKACRLIGMLFPGDMVVFKPQIP 662


>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Glycine max]
          Length = 877

 Score =  793 bits (2048), Expect = 0.0
 Identities = 436/696 (62%), Positives = 496/696 (71%), Gaps = 11/696 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQLI+AVE TAAMGPYW TI+ DY++K+IRCF GN+  GQK SA N E +LV +N H
Sbjct: 1    MAEKQLIVAVESTAAMGPYWNTILMDYLDKMIRCFGGNDSTGQKFSASNVEFALVTYNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            G YS+ LVQR+GWTRD D+F  WLS++PF GGGF+D AIAEGL+EALMM   +Q+G    
Sbjct: 61   GCYSSCLVQRSGWTRDPDVFFSWLSSIPFNGGGFNDAAIAEGLSEALMMLWNSQSGAPNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            Q+V+ HKHCIL+AASNP PL TPVY P  QNLEQ E  +  + S L DAE +AK F Q S
Sbjct: 121  QSVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDSDSGSHLYDAEAVAKAFPQFS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            +SLSVICPKQLPK+++IY+AGKRN  AADPP+ + K   FL+LISE F EAR ALSR GI
Sbjct: 181  ISLSVICPKQLPKIKSIYNAGKRNNRAADPPL-EAKTPHFLILISEGFREARGALSRSGI 239

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T+L  NQSPVK+D  S               NGSI +RQP+P GN+  ATVK+EP   TS
Sbjct: 240  TSLPSNQSPVKVDAVS-VTPVTGAPPTSMPVNGSIPNRQPVPAGNVAPATVKVEPVPVTS 298

Query: 1133 MVSGPVFSHVPSVVRA-----GVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTR 1294
            MVSGP F H  SV RA     GVPS+QTSSPS+ SQ++I++ +   ++KP V+ +    R
Sbjct: 299  MVSGPAFPHNSSVPRATSTSQGVPSLQTSSPSSVSQDIITNNETAQDTKPTVSML--PLR 356

Query: 1295 PLGGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
            P+  P  ANV+ILNNLSQARQVMNS AL+GGTS+GL SM  TP+AMHMSNMISSGM SSV
Sbjct: 357  PV-NPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 415

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            PAAQNVF                   AQV QNS LGS TS T            QPLGNL
Sbjct: 416  PAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXX 1819
             G VS+GQ V GMSQGNLSGAQM      MNQN++SGLG S VSSG GTMIPT       
Sbjct: 476  QGVVSIGQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTGTMIPT--PGMSQ 533

Query: 1820 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYR 1999
                                            KYVKVWEG+LSGQRQGQPVFIT+LEGYR
Sbjct: 534  PVQSVMQPLVNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYR 593

Query: 2000 NASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 2179
            N+SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKKLCA
Sbjct: 594  NSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCA 653

Query: 2180 VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            VIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 654  VIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 689


>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Cicer arietinum]
          Length = 818

 Score =  790 bits (2039), Expect = 0.0
 Identities = 424/696 (60%), Positives = 492/696 (70%), Gaps = 11/696 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQLI+ VE TAAMGPYW T+  DYIEKI+RC CGNE +GQKPS  N E +LV +N H
Sbjct: 1    MAEKQLIVVVESTAAMGPYWDTLQMDYIEKIVRCLCGNESSGQKPSVSNVEFALVTYNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            G YS  LVQRTGWT+D D+FLQWLS+VPF+GGGF+DVAIAEGLAEALMMF  +Q+G    
Sbjct: 61   GCYSGILVQRTGWTKDPDVFLQWLSSVPFSGGGFNDVAIAEGLAEALMMFPHSQSGGPNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            Q+ + H HCIL+AASNP PL TPVY P +Q+LEQ E+ + +   +L DAE +AK+F Q S
Sbjct: 121  QSADMHMHCILVAASNPYPLQTPVYVPQLQSLEQSESVDSEPGKQLYDAEAVAKVFPQFS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            +SLS+ICPKQLPK++A+Y+AGKRN  AADPPVD  K S FL+LISE F EAR ALSR GI
Sbjct: 181  ISLSIICPKQLPKVKAVYNAGKRNNRAADPPVD-AKTSHFLILISEGFREARGALSRSGI 239

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            TNL  NQSPVK+D  S               NG+I +RQPIP GN+  ATVK+E    TS
Sbjct: 240  TNLPSNQSPVKVDTVSVTPVTGGPPTSLPSVNGTIANRQPIPAGNVTPATVKVEQVPVTS 299

Query: 1133 MVSGPVFSHVPSVVRA-----GVPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQSTR 1294
            M++GP F H  S  RA     G PS+Q SSPS+ SQ++++S +N  ++KP+V+ + Q  R
Sbjct: 300  MITGPAFPHNSSAARATSTGQGNPSLQASSPSSVSQDIMTSNENAQDTKPIVSML-QPLR 358

Query: 1295 PLGGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
            P+  PA  N +ILNNLSQARQVMNS AL+GGTS+GL SM  TP+AMHMSNMISS   SS 
Sbjct: 359  PV-NPAQVNGNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSATTSSG 417

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            P  QNVF                   AQV QN+ L S TSAT            Q L NL
Sbjct: 418  PTGQNVFSSGPPVITSITSSGSLTAPAQVAQNTGLASLTSATSNLSSSSNTGISQSLANL 477

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXX 1819
             G+VSMGQ   GM+ GNLSGAQM      MNQN+++GLG S VSSGNG MIPT       
Sbjct: 478  QGAVSMGQQASGMNPGNLSGAQMVQGGVNMNQNVMNGLGQSVVSSGNGAMIPT------P 531

Query: 1820 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYR 1999
                                            KY++VWEG+LSGQRQGQPVFIT+LEGYR
Sbjct: 532  GMPQQVQSGMQPLVNNAASANLPLSQQTSAQSKYIRVWEGSLSGQRQGQPVFITKLEGYR 591

Query: 2000 NASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 2179
            ++SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKKLCA
Sbjct: 592  SSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCA 651

Query: 2180 VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ+
Sbjct: 652  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQL 687


>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Glycine max]
            gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Glycine max]
          Length = 832

 Score =  787 bits (2032), Expect = 0.0
 Identities = 435/696 (62%), Positives = 494/696 (70%), Gaps = 11/696 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAEKQLI+AVE TAAMGPYW TI+ DY++K+IRCF GN+  GQK SA   E +LV +N H
Sbjct: 1    MAEKQLIVAVESTAAMGPYWDTILMDYLDKMIRCFGGNDSTGQKSSASIVEFALVTYNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            G YS+ LVQR+GWTRD D+F  WLS++PF GGGF+D AIAEGL+EALMM  I+Q+G    
Sbjct: 61   GCYSSCLVQRSGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMLWISQSGAPNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            Q+V+ HKHCIL+AASNP PL TPVY P  QNLEQ E  ++ + S L DAE +AK F Q S
Sbjct: 121  QSVDMHKHCILVAASNPYPLQTPVYVPRPQNLEQSETIDLDSGSHLYDAEAVAKAFPQFS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            +SLSVICPKQLPK++ IY+AGKRN  AAD P+ + K   FL+LISE F EA  ALSR GI
Sbjct: 181  ISLSVICPKQLPKIKTIYNAGKRNNRAADSPL-EAKTPHFLILISEGFREAWGALSRSGI 239

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
            T+L  NQSPVK+D  S               NGSI +RQP+P GN+  ATVK+EP    S
Sbjct: 240  TSLPSNQSPVKVDAVS-VTPVTEAPPTSMPVNGSIPNRQPVPAGNVAPATVKVEPVLVAS 298

Query: 1133 MVSGPVFSHVPSVVRA-----GVPSMQTSS-PSASQEMISSGDNVPESKPMVNNISQSTR 1294
            MVSGP F H  SV RA     GVPS+QTSS  S SQ++I++ +N  ++KP V+ +    R
Sbjct: 299  MVSGPAFPHNSSVPRATSTSQGVPSLQTSSLSSVSQDIITNNENAQDTKPTVSML--PLR 356

Query: 1295 PLGGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
            P+  PA ANV+ILNNLS ARQVMNS AL+GGTS+GL SMS TP+AMHMSNMISSGM SSV
Sbjct: 357  PV-NPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 415

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            PAAQNVF                   AQV QNS LGS TS T            QPLGNL
Sbjct: 416  PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXX 1819
             G+VSMGQ V GMSQGNLSGAQM      MNQN++SGLG S VSSG GTMIPT       
Sbjct: 476  QGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVMSGLGQSVVSSGTGTMIPT--PGMSQ 533

Query: 1820 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYR 1999
                                            KYVKVWEG+LSGQRQGQPVFIT+LEGYR
Sbjct: 534  PVQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYR 593

Query: 2000 NASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 2179
            N+SASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKKLCA
Sbjct: 594  NSSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCA 653

Query: 2180 VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            VIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 654  VIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 689


>ref|XP_007153353.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
            gi|561026707|gb|ESW25347.1| hypothetical protein
            PHAVU_003G028300g [Phaseolus vulgaris]
          Length = 863

 Score =  785 bits (2027), Expect = 0.0
 Identities = 434/697 (62%), Positives = 495/697 (71%), Gaps = 12/697 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            MAE QLI+ VE TAAMGPYW+TI+ DY++K+IR F GN+  GQK S PN E +LV +N H
Sbjct: 1    MAEFQLIVVVESTAAMGPYWETILVDYLDKMIRSFGGNDSTGQKSSTPNVEFALVTYNTH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            G YS  LVQRTGWTRD D+F  WLS++PF GGGF+D AIAEGL+EALMMF  +Q+G    
Sbjct: 61   GCYSGCLVQRTGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMFPNSQSGGPNQ 120

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            Q+V+ HKHCILIAASNP PL TPVY P  QNLEQ E  +  + +RL DAE +AK F Q S
Sbjct: 121  QSVDVHKHCILIAASNPYPLQTPVYVPRPQNLEQSETIDSDSGNRLYDAEAVAKAFPQFS 180

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            +SLSVICPKQLPK++AIY+AGKR+  AADPP+ + K   FL+LISE+F EAR+ALSR GI
Sbjct: 181  ISLSVICPKQLPKIKAIYNAGKRSNRAADPPL-EAKTPHFLILISESFREARSALSRSGI 239

Query: 953  TNLAPNQSPVKMDIASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNI-PTATVKLEPSTAT 1129
            T+L  NQSPVK+D  S               NGSI +RQP+P GN+ P ATVK+E    T
Sbjct: 240  TSLPSNQSPVKVDAVSVTPVTGAPPTSMPSVNGSIANRQPVPAGNVAPPATVKVEQVPVT 299

Query: 1130 SMVSGPVFSHVPSVVRAG-----VPSMQTSSPSA-SQEMISSGDNVPESKPMVNNISQST 1291
            SMVSGP F H  SV RA      VPS+QTSSPS+ SQ++I++ +N  ++KP V+ + QS 
Sbjct: 300  SMVSGPPFPHNSSVPRATSTSQVVPSLQTSSPSSVSQDIITNNENAQDTKPTVSML-QSL 358

Query: 1292 RPLGGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASS 1471
            RP+  P  ANVSILNNLSQARQVMNS AL+GGTS+GL SM  TP+AMHMSNMISSGM SS
Sbjct: 359  RPV-NPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSS 417

Query: 1472 VPAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGN 1651
            VPAAQNVF                   AQV QN  LGS TS T            QPLGN
Sbjct: 418  VPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGISQPLGN 477

Query: 1652 LHGSVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXX 1816
            L G+VSMGQ   GMSQGNLSG QM      MNQN +S LG S VSSGNGTMIPT      
Sbjct: 478  LQGAVSMGQQASGMSQGNLSGPQMVQGGVPMNQNAMSALGSSVVSSGNGTMIPT--PGMS 535

Query: 1817 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGY 1996
                                             KYVKVWEG+LSGQRQGQPVFIT+LEGY
Sbjct: 536  QQVQSGMQALGNNAAANMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGY 595

Query: 1997 RNASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLC 2176
            RN+SASE+LA+NWP VMQIVRLISQDHMNNKQYVGKADFLVFRAMN HGFLGQLQEKKLC
Sbjct: 596  RNSSASESLASNWPSVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLC 655

Query: 2177 AVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 2287
            AVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 656  AVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQL 692


>ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Capsella rubella]
            gi|482575487|gb|EOA39674.1| hypothetical protein
            CARUB_v10008315mg [Capsella rubella]
          Length = 827

 Score =  731 bits (1888), Expect = 0.0
 Identities = 401/697 (57%), Positives = 479/697 (68%), Gaps = 14/697 (2%)
 Frame = +2

Query: 242  KQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAHGSY 421
            KQLI+  EGTAA+GPYWQTIVSDY++KIIR FCG ELNG++      ELSLV+FN+HGSY
Sbjct: 7    KQLIVVAEGTAALGPYWQTIVSDYLDKIIRSFCGTELNGERNPVSTVELSLVIFNSHGSY 66

Query: 422  SAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTHQNV 601
             A LVQR+GWTRD+DIFL WLS++ F GGGF++VA AEGLAEALMMF       Q   ++
Sbjct: 67   CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFPPPSGQAQPSSDL 126

Query: 602  EGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCSVSL 781
            +  +HCILI ASNP+ LPTPVY+P +QN+E+ EN + Q+ESRLSDAET+A  FA+CSVSL
Sbjct: 127  K--RHCILITASNPHTLPTPVYRPRLQNVERNENGDTQSESRLSDAETVASYFAKCSVSL 184

Query: 782  SVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGITNL 961
            SV+CPKQLPK+RA+Y+AGK NP + D  +D VKN  +LVLISENF+EARAALS    TNL
Sbjct: 185  SVVCPKQLPKIRALYNAGKLNPQSVDLSIDTVKNPFYLVLISENFVEARAALSH-SATNL 243

Query: 962  APNQSPVKMD---IASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
               QSPVKMD   +A                NG I++RQP+ VG +PTATVK+EPST TS
Sbjct: 244  PQTQSPVKMDRATVAPSLPVTGQPPAPVTSANGPILNRQPVSVGPVPTATVKVEPSTVTS 303

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M   P F H+PSV R     +PS+QTSS S ASQ+M+++ +N P+ KP+V  +   T PL
Sbjct: 304  MAPVPSFPHIPSVARPATQAIPSIQTSSASPASQDMVTNAENAPDIKPVV--VGGMTAPL 361

Query: 1301 --GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
              G P  ANV++LNNLSQ RQVM+S AL G  S    S+  + +AMHMSNMIS+GMA+S+
Sbjct: 362  RAGPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAMHMSNMISTGMATSL 417

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            P +QN F                   AQ  Q+    +  S              Q   N+
Sbjct: 418  PPSQNAFSSGQQGTTSMASSGALMGSAQTGQSVGTNNAFS-------------PQTTSNV 464

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM-----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXX 1819
              ++ + Q + GM+QG+ SGAQM      MNQNM+SGLG  +VSSG G M+PT       
Sbjct: 465  ASNLGVSQPMQGMNQGSHSGAQMMQGGISMNQNMMSGLGHGNVSSGTGGMMPTPGVAQQA 524

Query: 1820 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYR 1999
                                            KYVKVWEGNLSGQRQGQPV ITRLEGYR
Sbjct: 525  QSVIQQLGGSNSSGPNMQLSQPSSGALQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYR 584

Query: 2000 NASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCA 2179
            +ASAS+TLAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCA
Sbjct: 585  SASASDTLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCA 644

Query: 2180 VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP
Sbjct: 645  VIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 681


>gb|EYU29949.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus guttatus]
          Length = 777

 Score =  728 bits (1879), Expect = 0.0
 Identities = 413/696 (59%), Positives = 480/696 (68%), Gaps = 10/696 (1%)
 Frame = +2

Query: 233  MAEKQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAH 412
            M  KQLI+AVEGTAA+GP+WQTIVSDY++KIIR FCGNE  GQKP+  +FELSLVMFNAH
Sbjct: 1    MVPKQLIVAVEGTAAIGPFWQTIVSDYLDKIIRSFCGNEPTGQKPATTHFELSLVMFNAH 60

Query: 413  GSYSAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTH 592
            GSYSA LVQR+GWT+D+DIF QWLSA+PFAGGGF+D AIAEGL+EALMMFS  +     +
Sbjct: 61   GSYSACLVQRSGWTKDMDIFFQWLSAIPFAGGGFNDAAIAEGLSEALMMFSSPKGN--QN 118

Query: 593  QNVEGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCS 772
            QNVEG +HCILIAASNP PLPTPV++P +QN E+ +  E Q ++RLSDAETLAK FAQC+
Sbjct: 119  QNVEGQRHCILIAASNPYPLPTPVFRPQIQNPEKNDGVESQPDNRLSDAETLAKSFAQCA 178

Query: 773  VSLSVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGI 952
            VSLSVICPKQLPKLR I++AGKRNP A DPPVD  KN  FLVLISENFMEAR+ LSR GI
Sbjct: 179  VSLSVICPKQLPKLRGIFNAGKRNPRAPDPPVDNNKNPHFLVLISENFMEARSCLSRSGI 238

Query: 953  TNLAPNQSPVKMDIA-SXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTAT 1129
            T+L PNQ PVKMD+  +               NGS+++RQP+P  NIP A VKLEP T  
Sbjct: 239  TSLPPNQIPVKMDVTPAPPPISGPPPVSIPAVNGSLLARQPVPAANIPPAIVKLEPPTIA 298

Query: 1130 SMVSGPVFSHVPSVVRA---GVPSMQTSSP-SASQEMISSGDNVPESKPMVNNISQSTRP 1297
              ++GP F H+ S+ RA    VP+MQTSSP S  QE+I   +N+PE KP+V + +   RP
Sbjct: 299  PSMTGPTFPHISSIPRAVPQTVPTMQTSSPISTPQEVIPINENIPEVKPLVASSAPPIRP 358

Query: 1298 LGGPAAANVSILNNLSQARQVMNSTALTGG--TSVGLQSMSG-TPMAMHMSNMISSGMAS 1468
             GG AAANV ILN+++QARQ + + A  GG   S+G+ SM G T M   +SNMISSGM +
Sbjct: 359  AGG-AAANVRILNDMAQARQALAAAAAGGGGGASIGIPSMGGGTTM---LSNMISSGMMT 414

Query: 1469 SVPAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLG 1648
            S   +                        QV QN++  S  + +            QPL 
Sbjct: 415  SSSMSSG-----PSIVTSISGPLPMSANGQVAQNNSGNSGIAMSS-----------QPLS 458

Query: 1649 NLHGSVSMGQS--VPGMSQGNLSGAQMGMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXX 1822
             L G+V  GQ+  +P + Q   +G  MGMN NM+SG G +S  S  G             
Sbjct: 459  GLQGNVGPGQTGNIPVVPQMVQTG--MGMNANMMSGGGGASGMSQQG------------- 503

Query: 1823 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRN 2002
                                           KYVKVWEGNLSGQRQGQPVFITRLEGYR+
Sbjct: 504  ---QPPGGMNSNNVVNTLNQQTSATMQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRS 560

Query: 2003 ASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 2182
            ASASETLAANWP  MQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV
Sbjct: 561  ASASETLAANWPSTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 620

Query: 2183 IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            IQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQIP
Sbjct: 621  IQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQIP 656


>ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arabidopsis lyrata subsp.
            lyrata] gi|297336526|gb|EFH66943.1| hypothetical protein
            ARALYDRAFT_472815 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  724 bits (1870), Expect = 0.0
 Identities = 398/696 (57%), Positives = 478/696 (68%), Gaps = 13/696 (1%)
 Frame = +2

Query: 242  KQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAHGSY 421
            KQLI+  EGTAA+GPYWQTIVSDY+EKIIR FCG+ELNG++      ELSLV+FN+HGSY
Sbjct: 6    KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65

Query: 422  SAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTHQNV 601
             A LVQR+GWTRD+DIFL WLS++ F GGGF++VA AEGLAEALMMFS      Q   ++
Sbjct: 66   CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQPSNDL 125

Query: 602  EGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCSVSL 781
            +  +HCILI ASNP+ LPTPV++P +Q++E+ EN + Q ESRLSDAET+A  FA+CSVSL
Sbjct: 126  K--RHCILITASNPHTLPTPVFRPRLQSVERNENGDAQAESRLSDAETVASYFAKCSVSL 183

Query: 782  SVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGITNL 961
            SV+CPKQLPK+RA+Y+AGK NP +AD  +D  KN+ +LVLISENF+EARAALS    TNL
Sbjct: 184  SVVCPKQLPKIRALYNAGKLNPQSADLSIDTAKNTFYLVLISENFVEARAALSH-SATNL 242

Query: 962  APNQSPVKMD---IASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
               QSPVK+D   +A                NG I +RQP+ VG +PTATVK+EPST TS
Sbjct: 243  PQTQSPVKVDRATVAPSLPVTGQPPAPVTSANGPIQNRQPVSVGPVPTATVKVEPSTVTS 302

Query: 1133 MVSGPVFSHVPSVVRAG---VPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M   P F H+PSV R     +PS+QTSS S  SQ+M+++ +N P+ KP+V  +   T PL
Sbjct: 303  MAPVPNFPHIPSVARPATQPIPSIQTSSASPVSQDMVTNAENAPDIKPVV--VGGMTPPL 360

Query: 1301 --GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
              G P  ANV++LNNLSQ RQVM+S AL G  S   QS     +AMHMSNMIS+GMA+S+
Sbjct: 361  RTGPPGGANVNLLNNLSQVRQVMSSAALAGAASSAGQS----AVAMHMSNMISTGMATSL 416

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            P +Q VF                   AQ  Q+    +  S              Q   N+
Sbjct: 417  PPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFS-------------PQTTPNV 463

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXX 1822
              ++ + Q + GM+QG+ SGA M     MNQN++SGLG  +VSSG G M+PT        
Sbjct: 464  ASNLGVSQPMQGMNQGSHSGAMMQGGISMNQNIVSGLGQGNVSSGTGGMMPTPGVGQQAQ 523

Query: 1823 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRN 2002
                                           KYVKVWEGNLSGQRQGQPV ITRLEGYR+
Sbjct: 524  SGIQQLGGSNSSAPNMQLSQPSSGALQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRS 583

Query: 2003 ASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 2182
            ASAS++LAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCAV
Sbjct: 584  ASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCAV 643

Query: 2183 IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP
Sbjct: 644  IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 679


>ref|NP_173925.3| mediator of RNA polymerase II transcription subunit 25 [Arabidopsis
            thaliana] gi|75145501|sp|Q7XYY2.1|MED25_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            25; Short=AtMED25; AltName: Full=Phytochrome and
            flowering time 1 protein; AltName: Full=Phytochrome and
            flowering time regulatory protein 1
            gi|32478899|gb|AAO39425.1| phytochrome and flowering time
            1 protein [Arabidopsis thaliana]
            gi|332192518|gb|AEE30639.1| mediator of RNA polymerase II
            transcription subunit 25 [Arabidopsis thaliana]
          Length = 836

 Score =  723 bits (1865), Expect = 0.0
 Identities = 398/696 (57%), Positives = 477/696 (68%), Gaps = 13/696 (1%)
 Frame = +2

Query: 242  KQLIIAVEGTAAMGPYWQTIVSDYIEKIIRCFCGNELNGQKPSAPNFELSLVMFNAHGSY 421
            KQLI+  EGTAA+GPYWQTIVSDY+EKIIR FCG+ELNG++      ELSLV+FN+HGSY
Sbjct: 6    KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65

Query: 422  SAFLVQRTGWTRDIDIFLQWLSAVPFAGGGFSDVAIAEGLAEALMMFSIAQNGCQTHQNV 601
             A LVQR+GWTRD+DIFL WLS++ F GGGF++VA AEGLAEALMMFS      Q   ++
Sbjct: 66   CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQPSNDL 125

Query: 602  EGHKHCILIAASNPNPLPTPVYQPLMQNLEQRENNEVQTESRLSDAETLAKLFAQCSVSL 781
            +  +HCILI ASNP+ LPTPVY+P +QN+E+ EN + Q ESRLSDAET+A  FA+CSVSL
Sbjct: 126  K--RHCILITASNPHILPTPVYRPRLQNVERNENGDAQAESRLSDAETVASYFAKCSVSL 183

Query: 782  SVICPKQLPKLRAIYDAGKRNPGAADPPVDQVKNSQFLVLISENFMEARAALSRPGITNL 961
            SV+CPKQLP +RA+Y+AGK N  +AD  +D  KN+ +LVLISENF+EA AALS    TNL
Sbjct: 184  SVVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSH-SATNL 242

Query: 962  APNQSPVKMD---IASXXXXXXXXXXXXXXXNGSIMSRQPIPVGNIPTATVKLEPSTATS 1132
               QSPVK+D   +A                NG I +RQP+ VG +PTATVK+EPST TS
Sbjct: 243  PQTQSPVKVDRATVAPSIPVTGQPPAPVSSANGPIQNRQPVSVGPVPTATVKVEPSTVTS 302

Query: 1133 MVSGPVFSHVPSVVR---AGVPSMQTSSPS-ASQEMISSGDNVPESKPMVNNISQSTRPL 1300
            M   P F H+P+V R     +PS+QTSS S  SQ+M+S+ +N P+ KP+V  +S  T PL
Sbjct: 303  MAPVPSFPHIPAVARPATQAIPSIQTSSASPVSQDMVSNAENAPDIKPVV--VSGMTPPL 360

Query: 1301 --GGPAAANVSILNNLSQARQVMNSTALTGGTSVGLQSMSGTPMAMHMSNMISSGMASSV 1474
              G P  ANV++LNNLSQ RQVM+S AL G  S    S+  + +AMHMSNMIS+GMA+S+
Sbjct: 361  RTGPPGGANVNLLNNLSQVRQVMSSAALAGAAS----SVGQSAVAMHMSNMISTGMATSL 416

Query: 1475 PAAQNVFXXXXXXXXXXXXXXXXXXXAQVTQNSALGSFTSATXXXXXXXXXXXXQPLGNL 1654
            P +Q VF                   AQ  Q+    +  S              Q   N+
Sbjct: 417  PPSQTVFSTGQQGITSMAGSGALMGSAQTGQSPGPNNAFS-------------PQTTSNV 463

Query: 1655 HGSVSMGQSVPGMSQGNLSGAQM----GMNQNMISGLGPSSVSSGNGTMIPTXXXXXXXX 1822
              ++ + Q + GM+QG+ SGA M     MNQNM+SGLG  +VSSG G M+PT        
Sbjct: 464  ASNLGVSQPMQGMNQGSHSGAMMQGGISMNQNMMSGLGQGNVSSGTGGMMPTPGVGQQAQ 523

Query: 1823 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRN 2002
                                           KYVKVWEGNLSGQRQGQPV ITRLEGYR+
Sbjct: 524  SGIQQLGGSNSSAPNMQLSQPSSGAMQTSQSKYVKVWEGNLSGQRQGQPVLITRLEGYRS 583

Query: 2003 ASASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAV 2182
            ASAS++LAANWPP MQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQ+KKLCAV
Sbjct: 584  ASASDSLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMSQHGFLGQLQDKKLCAV 643

Query: 2183 IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 2290
            IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP
Sbjct: 644  IQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 679