BLASTX nr result
ID: Paeonia23_contig00002355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00002355
(1012 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi... 331 3e-88
ref|XP_007224117.1| hypothetical protein PRUPE_ppa015699mg, part... 328 2e-87
ref|XP_006419800.1| hypothetical protein CICLE_v10007182mg [Citr... 322 2e-85
ref|XP_006489286.1| PREDICTED: pentatricopeptide repeat-containi... 320 4e-85
gb|EXB95839.1| hypothetical protein L484_010038 [Morus notabilis] 315 2e-83
ref|XP_004298179.1| PREDICTED: pentatricopeptide repeat-containi... 312 2e-82
ref|XP_006597570.1| PREDICTED: pentatricopeptide repeat-containi... 307 5e-81
ref|XP_004486302.1| PREDICTED: pentatricopeptide repeat-containi... 305 1e-80
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,... 304 3e-80
ref|XP_007034586.1| Tetratricopeptide-like helical [Theobroma ca... 300 5e-79
ref|XP_002314420.2| hypothetical protein POPTR_0010s03090g [Popu... 298 2e-78
ref|XP_003594127.1| Pentatricopeptide repeat-containing protein ... 294 4e-77
ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containi... 291 2e-76
ref|XP_006339412.1| PREDICTED: pentatricopeptide repeat-containi... 290 5e-76
ref|XP_007147782.1| hypothetical protein PHAVU_006G154600g [Phas... 286 1e-74
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi... 277 6e-72
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi... 277 6e-72
ref|XP_006400456.1| hypothetical protein EUTSA_v10012849mg [Eutr... 265 2e-68
ref|XP_002873924.1| pentatricopeptide repeat-containing protein ... 265 3e-68
ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis th... 263 1e-67
>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 331 bits (848), Expect = 3e-88
Identities = 172/348 (49%), Positives = 230/348 (66%), Gaps = 12/348 (3%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y +ML TG+G N+VM+VDLISACGR +A+ EGQQ H I++TG DCYD IQATIIHFYA
Sbjct: 303 MYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYA 362
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +I+LA+ QFEL SKDH+SSWNALI+GF+RN M++QA+Q+FDEMPERDVFSWS+M+
Sbjct: 363 ACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISG 422
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWL-----VSSLQLHLWAYWKKEDEPISIYIRN 528
+ L+ F E G ++ + +++L + W E YI +
Sbjct: 423 YSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHE------YILS 476
Query: 529 NSIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYK 687
NSIP NDNL+AALIDMYAKCGSI L++FY I+ R++ + C GHA
Sbjct: 477 NSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSL 536
Query: 688 FVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHY 867
+ L R++ + ITFI VL+AC HAGLV+ GE+YF+ M++++N+ P+IKHY
Sbjct: 537 KLFSQLQRVR------IKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHY 590
Query: 868 GCMVDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
GCM+D +M++ MPMKA VVIWGTL AAC H N++IG
Sbjct: 591 GCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIG 638
Score = 80.1 bits (196), Expect = 1e-12
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAA 186
+N T ++ LV + +C LLA+ +GQQIHS + K+G ++ ++I FY
Sbjct: 40 FNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVK 99
Query: 187 CHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVI 366
C I A S F+ S S N ++AG++++ +D A+ +F++MP + S++ M++ +
Sbjct: 100 CRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGL 159
Query: 367 CRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSL----------QLHLWAYWKKEDEPI 510
+ + L + F++ G N++ L ++S+ LH ++ K E +
Sbjct: 160 AQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSF-KLGLEAL 218
Query: 511 SIYIRNNSIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
+I N L+ MY C S+ +F I R + N M G++
Sbjct: 219 NIVATN------------LVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYS 261
Score = 76.3 bits (186), Expect = 2e-11
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ N+V L +ISA + I + +H+ K G + + + ++H Y
Sbjct: 171 VFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYC 230
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A F+ + ++ +WN ++ G+ ++ +VD A+ +F+ +P +DV SW ++
Sbjct: 231 VCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDG 290
Query: 364 ICRPSSLLWLLRYFREW*L--VGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
+ L LR +R VG N++ + L+S+ + E + I
Sbjct: 291 YVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAV---SEGQQFHGIIVRTGF 347
Query: 538 PFNDNLSAALIDMYAKCGSIN 600
D + A +I YA CG IN
Sbjct: 348 DCYDFIQATIIHFYAACGEIN 368
>ref|XP_007224117.1| hypothetical protein PRUPE_ppa015699mg, partial [Prunus persica]
gi|462421053|gb|EMJ25316.1| hypothetical protein
PRUPE_ppa015699mg, partial [Prunus persica]
Length = 674
Score = 328 bits (842), Expect = 2e-87
Identities = 179/343 (52%), Positives = 222/343 (64%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y AML TGLG NDVMLVDLISACGR AI EG+Q H I+K G DCYD IQATII+FYA
Sbjct: 283 MYRAMLRTGLGPNDVMLVDLISACGRSEAIHEGEQFHERIVKEGFDCYDFIQATIINFYA 342
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC ++ LA+ QFE H++SWNALIAG+IRN M+DQA+ +F+EMPERDVFSWS+M+
Sbjct: 343 ACGRMSLAHLQFEKGIMQHVASWNALIAGYIRNRMIDQARLLFNEMPERDVFSWSSMISG 402
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L F+ G ++ +VS KE YI NSIP
Sbjct: 403 YAQSEQPELALELFQRMVASGIQPNEIT-MVSVFSAIATLGTLKEGRWAHEYILENSIPL 461
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT*N 702
NDNLSAALIDMYAKCGSI+T LEVFY IR + + + C GHA ++
Sbjct: 462 NDNLSAALIDMYAKCGSIHTALEVFYQIRDKASTVSPWNAIICGLAMHGHA----TLSLE 517
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
+F W+ LNS ITFI VL+AC HAG VE GERYF+SM++++N+ P+IKHYGC+VD
Sbjct: 518 IFSDLQWRNVKLNS--ITFIGVLSACCHAGFVEAGERYFKSMKNVYNIEPNIKHYGCLVD 575
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
KM++SMPMKA +VIWGTL AAC H N++IG
Sbjct: 576 LLGRAGRVEDAEKMIRSMPMKADIVIWGTLLAACRTHGNLEIG 618
Score = 78.6 bits (192), Expect = 4e-12
Identities = 53/213 (24%), Positives = 107/213 (50%), Gaps = 2/213 (0%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ LV ++ +C L+A+ +GQQIHS ++K+G I ++I+ YA C I A S F
Sbjct: 32 ELALVSVLKSCSSLVAVFQGQQIHSIVLKSGLHSNTFINNSLINMYAKCGFIAAAESLFG 91
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
S+ S N ++AG++++ +D A+++F+ MP + S++ M++ + + ++
Sbjct: 92 SCSELDPVSCNIMVAGYVKSGHLDNARRLFEIMPRKGCVSYTTMIMGLAQNECWTEAIKV 151
Query: 403 FREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDM 576
F++ G N++ + ++S+ HL + + + + +S L+ M
Sbjct: 152 FKDMRSAGVIPNEVTMATVISTCS-HLGGI--RNCRMLHGLVVKLQLEGFVLVSTNLLHM 208
Query: 577 YAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
Y C S+ G +F + R + N M G+A
Sbjct: 209 YCGCSSVWEGRSLFNEMSERNIVSWNVMLNGYA 241
Score = 73.9 bits (180), Expect = 1e-10
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ N+V + +IS C L I + +H ++K + + + ++H Y
Sbjct: 151 VFKDMRSAGVIPNEVTMATVISTCSHLGGIRNCRMLHGLVVKLQLEGFVLVSTNLLHMYC 210
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + S F S+ ++ SWN ++ G+ + +VD A+++FD++ +DV SW M+
Sbjct: 211 GCSSVWEGRSLFNEMSERNIVSWNVMLNGYAKAGLVDLARELFDKIHTKDVVSWGTMIDG 270
Query: 364 ICRPSSLLWLLRYFREW*L--VGSNQMKLQWLVS----SLQLHLWAYWKKEDEPISIYIR 525
+ L + +R +G N + L L+S S +H E E I
Sbjct: 271 YVQVDWLSEAMVMYRAMLRTGLGPNDVMLVDLISACGRSEAIH-------EGEQFHERIV 323
Query: 526 NNSIPFNDNLSAALIDMYAKCGSIN 600
D + A +I+ YA CG ++
Sbjct: 324 KEGFDCYDFIQATIINFYAACGRMS 348
>ref|XP_006419800.1| hypothetical protein CICLE_v10007182mg [Citrus clementina]
gi|557521673|gb|ESR33040.1| hypothetical protein
CICLE_v10007182mg [Citrus clementina]
Length = 695
Score = 322 bits (825), Expect = 2e-85
Identities = 179/349 (51%), Positives = 223/349 (63%), Gaps = 12/349 (3%)
Frame = +1
Query: 1 TLYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFY 180
T+Y AML G+ NDVM+VDLISACGR +A GEG QIHS I+K G DCYD IQATIIHFY
Sbjct: 303 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 362
Query: 181 AACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLL 360
AAC +I+LA QFEL KDH++SWNALIAGFIRN M++ A+Q+F+ M +RDV+SWSAM+
Sbjct: 363 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 422
Query: 361 VICRPSSLLWLLRYFREW*LVGSNQMKLQWL-----VSSLQLHLWAYWKKEDEPISIYIR 525
+ L F G ++ + ++SL W E Y+
Sbjct: 423 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASLGTLKEGRWAHE------YVL 476
Query: 526 NNSIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTY 684
NNSI NDNLSAA+IDMYAKCGS NT LEVFYHIR R T + C G A
Sbjct: 477 NNSITLNDNLSAAIIDMYAKCGSNNTALEVFYHIRDRTTSVSPWNAIICGLAMHGDA--- 533
Query: 685 KFVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKH 864
+T ++ + LNS ITFI VL+ C HAGLV+ GERYF+SM+S++NV PD+KH
Sbjct: 534 -NLTLKIYSDLEKRNIKLNS--ITFIGVLSTCCHAGLVDRGERYFKSMKSVYNVEPDLKH 590
Query: 865 YGCMVDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
YGCMVD ++++SMPMKA VVIWGTL AA IH N+++G
Sbjct: 591 YGCMVDLLGRAGRLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 639
Score = 88.2 bits (217), Expect = 5e-15
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ LV + C +A+ +GQQIHS I K+G + IQ ++I+ YA C I A S F+
Sbjct: 53 ELALVSALRYCSVHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 112
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
S + N +I+G+IRN+ ++ A+++FD+ P + S+++M++ + L
Sbjct: 113 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 172
Query: 403 FREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDM 576
FR+ + G N++ L ++SS +HL W E + + I +S L++M
Sbjct: 173 FRDMRISGVIPNEVTLASVISS-SVHLGGIW--ECRMLHGLVIKLMIDGFVIISTNLLNM 229
Query: 577 YAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
Y C S+ +F ++ R + N M G A
Sbjct: 230 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 262
Score = 74.7 bits (182), Expect = 6e-11
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M +G+ N+V L +IS+ L I E + +H +IK D + I +++ Y
Sbjct: 172 VFRDMRISGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 231
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A S F+ + ++ SWN ++ GF + +V+ A+++F+ +P +DV SW M+
Sbjct: 232 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 291
Query: 364 ICRPSSLLWLLRYFREW*L--VGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
+ L L +R + N + + L+S+ A E I I
Sbjct: 292 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR---AMAFGEGLQIHSIIVKAGF 348
Query: 538 PFNDNLSAALIDMYAKCGSIN 600
D + A +I YA CG IN
Sbjct: 349 DCYDFIQATIIHFYAACGRIN 369
>ref|XP_006489286.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Citrus sinensis]
Length = 695
Score = 320 bits (821), Expect = 4e-85
Identities = 178/349 (51%), Positives = 223/349 (63%), Gaps = 12/349 (3%)
Frame = +1
Query: 1 TLYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFY 180
T+Y AML G+ NDVM+VDLISACGR +A GEG QIHS I+K G DCYD IQATIIHFY
Sbjct: 303 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 362
Query: 181 AACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLL 360
AAC +I+LA QFEL KDH++SWNAL+AGFIRN M++ A+Q+F+ M +RDV+SWSAM+
Sbjct: 363 AACGRINLARLQFELGIKDHIASWNALVAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 422
Query: 361 VICRPSSLLWLLRYFREW*LVGSNQMKLQWL-----VSSLQLHLWAYWKKEDEPISIYIR 525
+ L F G ++ + ++SL W E Y+
Sbjct: 423 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASLGTLKEGRWAHE------YVL 476
Query: 526 NNSIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTY 684
NNSI NDNLSAA+IDMYAKCGS NT LEVFYHIR R T + C G A
Sbjct: 477 NNSITLNDNLSAAIIDMYAKCGSNNTALEVFYHIRDRTTSVSPWNAIICGLAMHGDA--- 533
Query: 685 KFVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKH 864
+T ++ + LNS ITFI VL+ C HAGLV+ GERYF+SM+S++NV PD+KH
Sbjct: 534 -NLTLKIYSDLEKRNIKLNS--ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 590
Query: 865 YGCMVDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
YGCMVD ++++SMPMKA VVIWGTL AA IH N+++G
Sbjct: 591 YGCMVDLLGRAGRLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 639
Score = 89.4 bits (220), Expect = 2e-15
Identities = 61/213 (28%), Positives = 109/213 (51%), Gaps = 2/213 (0%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ LV + C +A+ +GQQIHS I K+G + IQ ++I+ YA C I A S F+
Sbjct: 53 ELALVSALRYCSVHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 112
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
S + N +I+G+IRN+ ++ A+++FD+ P + S+++M++ + L
Sbjct: 113 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 172
Query: 403 FREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDM 576
FR+ ++G N++ L ++SS +HL W E + + I +S L++M
Sbjct: 173 FRDMRILGVIPNEVTLASVISS-SVHLGGIW--ECRMLHGLVIKLMIDGFVIISTNLLNM 229
Query: 577 YAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
Y C S+ +F ++ R + N M G A
Sbjct: 230 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 262
Score = 73.9 bits (180), Expect = 1e-10
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ N+V L +IS+ L I E + +H +IK D + I +++ Y
Sbjct: 172 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 231
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A S F+ + ++ SWN ++ GF + +V+ A+++F+ +P +DV SW M+
Sbjct: 232 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 291
Query: 364 ICRPSSLLWLLRYFREW*L--VGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
+ L L +R + N + + L+S+ A E I I
Sbjct: 292 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR---AMAFGEGLQIHSIIVKAGF 348
Query: 538 PFNDNLSAALIDMYAKCGSIN 600
D + A +I YA CG IN
Sbjct: 349 DCYDFIQATIIHFYAACGRIN 369
>gb|EXB95839.1| hypothetical protein L484_010038 [Morus notabilis]
Length = 709
Score = 315 bits (807), Expect = 2e-83
Identities = 171/340 (50%), Positives = 218/340 (64%), Gaps = 7/340 (2%)
Frame = +1
Query: 13 AMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACH 192
AMLH GL +NDVM+VDL+SACGR +A EG+QIH I+K G DCYD IQATII+FYAAC
Sbjct: 321 AMLHAGLRANDVMVVDLVSACGRFMAFAEGRQIHGVIVKEGFDCYDFIQATIINFYAACG 380
Query: 193 KIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICR 372
LA QFE+ KDHL+SWNALIAG+I+N M+DQA+Q+FDEMPERDVFSWSAM+ +
Sbjct: 381 STSLARLQFEVGIKDHLASWNALIAGYIKNGMIDQARQLFDEMPERDVFSWSAMISGYTQ 440
Query: 373 PSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDN 552
L F E G ++ +VS L KE YI + SI NDN
Sbjct: 441 NEQPNEALELFHEMIASGVQANEIT-MVSVLSAIATLGTLKEGRWAHEYIFSKSILLNDN 499
Query: 553 LSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT*NLFR 711
LSAAL+DMYAKCG++NT LE+FY IR +++ + C G A + +L
Sbjct: 500 LSAALVDMYAKCGNVNTALEMFYQIRDKISTVSPWNAIICGLAMHGDAKLALKIFSDL-- 557
Query: 712 IQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVDXXX 891
++ + ITFI VL+AC HAGLV GE YF+SM++++N+ PDIKHYGCMVD
Sbjct: 558 ----QRRHIKLNAITFIGVLSACCHAGLVGAGEGYFKSMKNVYNIEPDIKHYGCMVDLLG 613
Query: 892 XXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+++KSMPMKA +VIWGTL AAC H N+++G
Sbjct: 614 RAGRLEEAEELIKSMPMKADIVIWGTLLAACRTHGNVEVG 653
Score = 81.3 bits (199), Expect(2) = 3e-13
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ LV + +C L A+ +GQQIHS ++K+G I ++I YA C I A + F+
Sbjct: 67 ELALVSALKSCSSLSAVFQGQQIHSLVLKSGLGSNTFIANSLISMYAKCGFISDARTLFD 126
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
SK S N +++G++++ +D A+Q+F+ MP + S++ M++ + R +
Sbjct: 127 SCSKLDTVSCNIMVSGYVKSGQLDNARQLFEIMPGKGCISYTTMIMGLARNECWKEATQL 186
Query: 403 FREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDM 576
F++ G NQ+ + L+S+ +H+ W + + + + + +S L++M
Sbjct: 187 FKDMRFEGIAPNQVMMASLISAC-VHIGGIW--DCRMLHGLVIKLQLLGSVFVSTNLLNM 243
Query: 577 YAKCGSINTGLEVFYHIRRRLTMECNYMWIG 669
Y C S+ +F + R + N M G
Sbjct: 244 YCACSSLGDAKTLFDEMPERNIVSWNVMLNG 274
Score = 21.2 bits (43), Expect(2) = 3e-13
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 644 WNAIICGLAMHGHTNLSLEIFSEFRV 721
WN ++ G + G +L+ E+F V
Sbjct: 268 WNVMLNGFSKAGLVDLARELFERIPV 293
Score = 76.3 bits (186), Expect = 2e-11
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
L+ M G+ N VM+ LISAC + I + + +H +IK + +++ Y
Sbjct: 186 LFKDMRFEGIAPNQVMMASLISACVHIGGIWDCRMLHGLVIKLQLLGSVFVSTNLLNMYC 245
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML-- 357
AC + A + F+ + ++ SWN ++ GF + +VD A+++F+ +P +DV SW M+
Sbjct: 246 ACSSLGDAKTLFDEMPERNIVSWNVMLNGFSKAGLVDLARELFERIPVKDVVSWGTMIDG 305
Query: 358 -LVICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNS 534
+ + R S L + L ++ M + + + + +A E I I
Sbjct: 306 YVQVERLSEALMMCCAMLHAGLRANDVMVVDLVSACGRFMAFA----EGRQIHGVIVKEG 361
Query: 535 IPFNDNLSAALIDMYAKCGS 594
D + A +I+ YA CGS
Sbjct: 362 FDCYDFIQATIINFYAACGS 381
>ref|XP_004298179.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 698
Score = 312 bits (799), Expect = 2e-82
Identities = 178/345 (51%), Positives = 223/345 (64%), Gaps = 12/345 (3%)
Frame = +1
Query: 13 AMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACH 192
+ML GLG NDVMLVDLISACGRL AI EG Q H IIK G DCYD IQATII+FYA C
Sbjct: 309 SMLRAGLGPNDVMLVDLISACGRLEAICEGLQFHGRIIKGGFDCYDFIQATIINFYAGCG 368
Query: 193 KIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICR 372
++ A QFE S K+H++SWNAL+AG+IRN+M+DQA ++FDEMPERDVFSWS M+ +
Sbjct: 369 EMIPARLQFEKSIKEHVASWNALLAGYIRNQMIDQASELFDEMPERDVFSWSCMISGYTQ 428
Query: 373 PSSLLWLLRYFREW*LVG--SNQMKLQWLVSSL-QLHLW--AYWKKEDEPISIYIRNNSI 537
L F+ G N++ + ++S++ L W W E YI NSI
Sbjct: 429 TEKSELALELFQRMVSSGIQPNEITMVSVLSAIATLGRWKEGIWAHE------YICENSI 482
Query: 538 PFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT 696
P NDNLSAA+IDMYAKCGSINT LEVFY I+ + + + C GHA ++
Sbjct: 483 PLNDNLSAAIIDMYAKCGSINTALEVFYQIQDKTSSVSPWNAIICGLAMHGHA----PMS 538
Query: 697 *NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCM 876
+F + LNS ITFI VL AC HAGLVE GE YF+SM ++++++P+IKHYGCM
Sbjct: 539 LEIFSHLQRRDIKLNS--ITFIGVLGACCHAGLVEVGEMYFKSMETVYHIQPNIKHYGCM 596
Query: 877 VDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
VD K+++SMPMKA VVIWGTL AAC H N++IG
Sbjct: 597 VDLLGRAGRVVDAEKLIRSMPMKADVVIWGTLLAACTTHGNLEIG 641
Score = 72.4 bits (176), Expect = 3e-10
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
+V ++ +C L A+ GQQ+HS ++K+G I ++ Y+ C I A + F S
Sbjct: 58 IVSILKSCASLSALVLGQQLHSLVLKSGLLSNTFIHNSLTSMYSKCGSISGAEALFRSCS 117
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRYFRE 411
+ S N ++AG++++ +D A+Q+FD+MP R S++ M++ + R S + FR+
Sbjct: 118 ELDPVSCNIMLAGYVKSGDLDNARQLFDKMPHRGCVSYTTMIMGLSRNGSWREAVEVFRD 177
Query: 412 W*LVG--SNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIPFNDNLSAALIDMYA 582
G N++ + +VS L W + + + ++ + + +S L+ Y
Sbjct: 178 MRNAGVVPNELTMGAVVSMFS-QLGGIWNCRMLHGLVVKLQLDGMVL---VSTNLVKAYC 233
Query: 583 KCGSINTGLEVFYHIRRRLTMECNYMWIGH 672
C S+ +F + R + N M G+
Sbjct: 234 ACKSVGEARRLFDEMPERNVVTWNVMLNGY 263
Score = 56.2 bits (134), Expect(2) = 3e-09
Identities = 25/118 (21%), Positives = 60/118 (50%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M + G+ N++ + ++S +L I + +H ++K D + ++ Y
Sbjct: 174 VFRDMRNAGVVPNELTMGAVVSMFSQLGGIWNCRMLHGLVVKLQLDGMVLVSTNLVKAYC 233
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML 357
AC + A F+ + ++ +WN ++ G+ + +V A+++F+ + +DV SW M+
Sbjct: 234 ACKSVGEARRLFDEMPERNVVTWNVMLNGYCKAGLVHLAREVFERIDVKDVVSWGTMI 291
Score = 32.7 bits (73), Expect(2) = 3e-09
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 354 VAGYMQTEQPTLALEIFQRMVASGVKPNEITMVSILSAIASLGILEEG 497
+ GY+Q E + AL + M+ +G+ PN++ +V ++SA L + EG
Sbjct: 291 IDGYVQVEWLSEALMMCCSMLRAGLGPNDVMLVDLISACGRLEAICEG 338
>ref|XP_006597570.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 716
Score = 307 bits (786), Expect = 5e-81
Identities = 168/343 (48%), Positives = 213/343 (62%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y AML +GL N++++V+L+SACGRL AIG+G Q+H ++K G DCY+ IQ TIIHFYA
Sbjct: 324 MYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYA 383
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +DLA QFE+ +KDHL SWNAL++GFI+N MVDQA++IFD+MPERDVFSWS M+
Sbjct: 384 ACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISG 443
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L F + G ++ +VS KE YI N SIP
Sbjct: 444 YAQTDQSRIALELFHKMVASGIKPNEVT-MVSVFSAIATLGTLKEGRWAHEYICNESIPL 502
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRL-------TMECNYMWIGHAWTYKFVT*N 702
NDNL AALIDMYAKCGSIN+ L+ F IR + + C GHA V +
Sbjct: 503 NDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSD 562
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
+ R + ITFI VL+AC HAGLVE G R FR M+S +NV PDIKHYGCMVD
Sbjct: 563 MQRYN------IKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVD 616
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+M++SMPMKA +VIWGTL AAC H +++IG
Sbjct: 617 LLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIG 659
Score = 67.8 bits (164), Expect(2) = 6e-12
Identities = 33/118 (27%), Positives = 62/118 (52%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ ND+ LV++I AC I + IH+ IK + + ++ Y
Sbjct: 192 VFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYC 251
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML 357
C + A F+ + +L SWN ++ G+ + +VD A+++F+ +P++DV SW M+
Sbjct: 252 LCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMI 309
Score = 30.4 bits (67), Expect(2) = 6e-12
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +3
Query: 354 VAGYMQTEQPTLALEIFQRMVASGVKPNEITMVSILSAIASLGILEEG 497
+ GY+ + AL +++ M+ SG+ NEI +V+++SA L + +G
Sbjct: 309 IDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDG 356
>ref|XP_004486302.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cicer arietinum]
Length = 921
Score = 305 bits (782), Expect = 1e-80
Identities = 167/343 (48%), Positives = 213/343 (62%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y AML +GLG N+V+LV+L+SACGR AIG+G Q+H T++K G DCY+ +Q TIIHFYA
Sbjct: 529 IYRAMLQSGLGPNNVVLVNLVSACGRRTAIGDGLQLHGTVVKRGFDCYNFMQTTIIHFYA 588
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +D A QFE+ KDHL SWNALI+GFI+N M+DQA++ FDEMPERDVFSWS M+
Sbjct: 589 ACGMMDCACLQFEVGVKDHLESWNALISGFIKNGMMDQARKTFDEMPERDVFSWSTMISG 648
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L+ F + G ++ +VS +E Y+R+ SIPF
Sbjct: 649 YAQSEQPKMALQLFHKMLASGIKPNEVT-MVSVFSAIATLGTLQEGRLAHEYMRSESIPF 707
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRL-------TMECNYMWIGHAWTYKFVT*N 702
NDNL AA+IDMYAKCGSIN+ L+ F IR + C GHA T V +
Sbjct: 708 NDNLRAAVIDMYAKCGSINSALQFFNQIRDEVFSVSPWNATICGLASHGHASTCLEVFSD 767
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
+ R + ITFI VL+AC HAGLVE G R F+SM S +NV PDIKHYGCMVD
Sbjct: 768 MQRYH------IKPNPITFIGVLSACCHAGLVEPGRRIFKSMNSAYNVEPDIKHYGCMVD 821
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+ ++SMPM+A +VIWGTL AAC H N++IG
Sbjct: 822 LLGRAGLLEEAEETIRSMPMEADIVIWGTLLAACRTHGNINIG 864
Score = 68.6 bits (166), Expect = 4e-09
Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 33/310 (10%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ ND+ LV++I AC I + +H+ +K D + ++H Y
Sbjct: 397 VFKDMRFHGVVPNDLTLVNVIPACSHFGEIWNCRMVHALAVKLLVDGLVLVSTNLMHAYC 456
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A F+ + +L +WN ++ G+ + +VD A+++F ++ ++DV SW M+
Sbjct: 457 VCSGVREARRLFDEMHERNLVTWNVMLNGYAKTGLVDTARELFGKIHDKDVISWGTMIDG 516
Query: 364 ICRPSSLLWLLRYFREW*L--VGSNQMKLQWLVSS----------LQLH-------LWAY 486
L L +R +G N + L LVS+ LQLH Y
Sbjct: 517 YILKDRLCEALEIYRAMLQSGLGPNNVVLVNLVSACGRRTAIGDGLQLHGTVVKRGFDCY 576
Query: 487 WKKEDEPISIYIR---------NNSIPFNDNLSA--ALIDMYAKCGSINTGLEVFYHIRR 633
+ I Y + D+L + ALI + K G ++ + F +
Sbjct: 577 NFMQTTIIHFYAACGMMDCACLQFEVGVKDHLESWNALISGFIKNGMMDQARKTFDEMPE 636
Query: 634 RLTMECNYMWIGHAWTYKFVT*NLFRIQSWKKSI---LNSTQITFIRVLTACRHAGLVEE 804
R + M G+A + + +Q + K + + ++T + V +A G ++E
Sbjct: 637 RDVFSWSTMISGYAQSEQ----PKMALQLFHKMLASGIKPNEVTMVSVFSAIATLGTLQE 692
Query: 805 GERYFRSMRS 834
G MRS
Sbjct: 693 GRLAHEYMRS 702
Score = 66.6 bits (161), Expect = 2e-08
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIG--EGQQIHSTIIKTGHDCYDSIQATIIHFY 180
+NA H L ++ LV + +C L +G+QIHS K G + IQ ++I+ Y
Sbjct: 264 FNARQHQNLSECELALVSALKSCSSLSFSNSSQGRQIHSLAFKLGLNSNTFIQNSLINMY 323
Query: 181 AACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLL 360
+ C I A F+ S N +++G+++ +D A+++FD MP + S++ M++
Sbjct: 324 SKCGSISDAQLMFDACPTLDPVSCNIMVSGYVKAGQLDNARKLFDIMPSKGCVSYTTMIM 383
Query: 361 VICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNN 531
+ L F++ G N + L ++ + H W + +++ + +
Sbjct: 384 GFVQNGFFRDALEVFKDMRFHGVVPNDLTLVNVIPACS-HFGEIWNCRMVHALAVKLLVD 442
Query: 532 SIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMWIGHAWT 681
+ +S L+ Y C + +F + R + N M G+A T
Sbjct: 443 GLVL---VSTNLMHAYCVCSGVREARRLFDEMHERNLVTWNVMLNGYAKT 489
>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 710
Score = 304 bits (779), Expect = 3e-80
Identities = 164/343 (47%), Positives = 215/343 (62%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y +M+ G NDVM+VDLIS CGR +A+ EGQQ+ S ++K G DCYD IQ+TIIH YA
Sbjct: 317 MYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYA 376
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +I+ A QF + SK++++SWNALIAG++RN M+D+A ++F+EMPERDVFSWS M+
Sbjct: 377 ACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISG 436
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L F + G ++ +VS L + KE Y+ NNSI
Sbjct: 437 YTQNEQPNLALELFHKMVASGIKPNEVT-MVSVLSAIATSGTLKEGRWAHEYVHNNSITV 495
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT*N 702
+DNLSAA+IDMYAKCGSIN LEVFY IR + + + C GHA +
Sbjct: 496 SDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHA------NLS 549
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
L ++ + ITFI VLTAC H GLVE G+R+F SM+S H++ PDIKHYGCMVD
Sbjct: 550 LKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVD 609
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+M++SMPMKA VVIWGTL AAC H N+D+G
Sbjct: 610 LLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVG 652
Score = 71.6 bits (174), Expect = 5e-10
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Frame = +1
Query: 10 NAMLHTGLGSN----DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHF 177
N++L+ G +++LV + C L + +G+QIH + K+G + IQ ++I+
Sbjct: 51 NSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINM 110
Query: 178 YAACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML 357
Y C + A S F++ + S+N +I+G++++ +D A ++FDEMP + S++ M+
Sbjct: 111 YGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMI 170
Query: 358 LVICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLH--LWAYWKKEDEPISIYIR 525
+ + + F++ VG N++ + LVS+ +WA I +
Sbjct: 171 MGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFE 230
Query: 526 NNSIPFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
+ +S L+ MY C S+ +F + + + N M G++
Sbjct: 231 EFVL-----VSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYS 275
Score = 67.8 bits (164), Expect = 7e-09
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
L+ M + G+ N+V + L+SA I + +H +IK + + + ++ Y
Sbjct: 185 LFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYC 244
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A + F+ + ++ SWN ++ G+ + VD A+ +F+ +P +D+ +W ++
Sbjct: 245 VCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDG 304
Query: 364 ICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
R + L +R G N + + L+S + E + + +
Sbjct: 305 YVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTM---AMTEGQQLLSAVVKMGF 361
Query: 538 PFNDNLSAALIDMYAKCGSIN 600
D + + +I +YA CG IN
Sbjct: 362 DCYDFIQSTIIHLYAACGRIN 382
>ref|XP_007034586.1| Tetratricopeptide-like helical [Theobroma cacao]
gi|508713615|gb|EOY05512.1| Tetratricopeptide-like
helical [Theobroma cacao]
Length = 681
Score = 300 bits (769), Expect = 5e-79
Identities = 171/344 (49%), Positives = 215/344 (62%), Gaps = 8/344 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ AML G+ ++DVM+VDL+SAC R+ AI G Q+H I+K G DCY+ +QATIIHFYA
Sbjct: 288 MFCAMLCEGVEASDVMIVDLVSACARVGAIQAGLQLHGRIVKAGFDCYNFVQATIIHFYA 347
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC K+DLAY QFE+ KDHL+S NALI FIRN M++QA+Q+F EMPERDV SWS+++
Sbjct: 348 ACGKVDLAYLQFEVGIKDHLASRNALIGAFIRNGMIEQARQLFSEMPERDVSSWSSIIAG 407
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQ-WLVSSLQLHLWAYWKKEDEPISIYIRNNSIP 540
+ L+ F E +V S Q +VS E Y+ NNSIP
Sbjct: 408 YAQSEQPNVALQLFHE--MVASGMQPNQITMVSVFSAIASLGILNEGRLAHEYVHNNSIP 465
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMWI-------GHAWTYKFVT* 699
ND LSAA+IDMYAKCGSI+ LEVFY IR + + + I GHA +
Sbjct: 466 LNDILSAAIIDMYAKCGSISAALEVFYQIRDKTSTVSPWNAIIYGLAMHGHANLSLEIYS 525
Query: 700 NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMV 879
+L R + + ITFI VLTAC HAGLVE GE YF+SM+S +N+ P IKHYGCMV
Sbjct: 526 DLER-----RHHIKQNSITFIGVLTACCHAGLVELGETYFKSMKSAYNIDPGIKHYGCMV 580
Query: 880 DXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
D KM++SMP+KA VVIWGTL AAC H N+DIG
Sbjct: 581 DLLGRAGRLEEAEKMIRSMPVKADVVIWGTLLAACRTHGNVDIG 624
Score = 79.7 bits (195), Expect = 2e-12
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Frame = +1
Query: 22 HTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKID 201
H +++ L+ + + +I +GQ+ H +IK+G + IQ T++ Y C ID
Sbjct: 28 HRKPNDHELFLISSLKSAATHFSISQGQKTHCLVIKSGFNSNVFIQNTLLSMYTKCGSID 87
Query: 202 LAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSS 381
+ F K S+N +I+GF++ + A+ +FDEMP++ S++ M++
Sbjct: 88 ESERLFTCCPKLDPISYNIMISGFVKAGRFNDARSLFDEMPKKGCVSYTTMIMGFASKGF 147
Query: 382 LLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNL 555
L F+E VG N++ L L+S+ + + +++ + + +
Sbjct: 148 WGEALGIFKEMRNVGILPNEVTLASLISACSGFGGIFICRMLHGLAVKVLLDKFVI---V 204
Query: 556 SAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
S L+ MY CG++ G+E+F + R + N M G+A
Sbjct: 205 STNLLHMYCVCGNLRDGMELFNKMPERNVVSWNVMLNGYA 244
Score = 65.1 bits (157), Expect = 4e-08
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 37/305 (12%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M + G+ N+V L LISAC I + +H +K D + + ++H Y
Sbjct: 154 IFKEMRNVGILPNEVTLASLISACSGFGGIFICRMLHGLAVKVLLDKFVIVSTNLLHMYC 213
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMP--ERDVFSWSAM- 354
C + F + ++ SWN ++ G+ + V+ A+++F+ +P E+DV SW M
Sbjct: 214 VCGNLRDGMELFNKMPERNVVSWNVMLNGYAKAGEVELARELFERIPRKEKDVVSWGTMV 273
Query: 355 ------------LLVICR------PSSLLWLLRYFREW*LVGSNQMKLQW---------- 450
L++ C +S + ++ VG+ Q LQ
Sbjct: 274 DACVQVDRLSEALIMFCAMLCEGVEASDVMIVDLVSACARVGAIQAGLQLHGRIVKAGFD 333
Query: 451 ---LVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSA--ALIDMYAKCGSINTGLEV 615
V + +H +A K D + + D+L++ ALI + + G I ++
Sbjct: 334 CYNFVQATIIHFYAACGKVD----LAYLQFEVGIKDHLASRNALIGAFIRNGMIEQARQL 389
Query: 616 FYHIRRRLTMECNYMWIGHAWTYK-FVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAG 792
F + R + + G+A + + V LF S + QIT + V +A G
Sbjct: 390 FSEMPERDVSSWSSIIAGYAQSEQPNVALQLF--HEMVASGMQPNQITMVSVFSAIASLG 447
Query: 793 LVEEG 807
++ EG
Sbjct: 448 ILNEG 452
>ref|XP_002314420.2| hypothetical protein POPTR_0010s03090g [Populus trichocarpa]
gi|550328993|gb|EEF00591.2| hypothetical protein
POPTR_0010s03090g [Populus trichocarpa]
Length = 711
Score = 298 bits (764), Expect = 2e-78
Identities = 162/343 (47%), Positives = 213/343 (62%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y M+ TGLG ++V ++DLISACGR +AI EGQQ+H ++KT DCYD +QAT+IHFY+
Sbjct: 320 MYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYS 379
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +I+ A Q E KDH++S NALIAGFIRN ++DQA+++F+EMPERDVFSWS M+
Sbjct: 380 ACGRINEACFQLEFGIKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISG 439
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L F G ++ +VS KE Y+ NSIP
Sbjct: 440 YTQSDQPGMALELFHRMVTSGIRPNEVT-MVSVFSAIAALGTLKEGRWAHEYVHYNSIPL 498
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRL-------TMECNYMWIGHAWTYKFVT*N 702
NDNLSA++IDMYAKCGSINT LEVFY IR + T+ C GHA +
Sbjct: 499 NDNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKL------S 552
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
L ++ + + ITFI VL+AC HAGLV G+ YF+SM+S +N+ PDI+HYGCMVD
Sbjct: 553 LEIYSDLQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVD 612
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
++++SMPMKA VVIWG L +AC H N+ IG
Sbjct: 613 LLGKAGRLEEVEELIRSMPMKADVVIWGMLLSACKTHRNITIG 655
Score = 76.3 bits (186), Expect = 2e-11
Identities = 46/199 (23%), Positives = 93/199 (46%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y M G+ N+V + +ISAC R+ I + + +H +IK D + + +++ Y
Sbjct: 188 VYKEMRSVGVVPNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYC 247
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
A + A + F+ + ++ SWN ++ G+ + + AK++F+ +P++D+ SW ++
Sbjct: 248 ASSSLGEARALFDEMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDG 307
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
R L L +R G ++ ++ + A E + + + S
Sbjct: 308 YVRVERLREALMMYRLMVSTGLGPSEVT-MIDLISACGRAMAIVEGQQLHCVVVKTSFDC 366
Query: 544 NDNLSAALIDMYAKCGSIN 600
D + A +I Y+ CG IN
Sbjct: 367 YDFVQATVIHFYSACGRIN 385
Score = 61.2 bits (147), Expect = 6e-07
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Frame = +1
Query: 52 LVDLISACGRL-LAI--GEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
L+ + +C LAI G GQQI+ + K+G D I+ ++I+ Y+ C LA S F+
Sbjct: 69 LISALKSCATTHLAISQGRGQQIYCLVFKSGLDSNTFIRNSLINMYSKCGFFGLAKSLFD 128
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
K S N +I+G++++ +D A+++F+ MP++ S++ M++ + ++
Sbjct: 129 SCPKLDPVSCNIMISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKV 188
Query: 403 FREW*LVG--SNQMKLQWLVSSLQL--HLWAYWKKEDEPISIYIRNNSIPFNDNLSAALI 570
++E VG N++ + ++S+ +W I + + +S L+
Sbjct: 189 YKEMRSVGVVPNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVL-----VSTNLL 243
Query: 571 DMYAKCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
+MY S+ +F ++ + + N M G++
Sbjct: 244 NMYCASSSLGEARALFDEMQEKNVVSWNVMLNGYS 278
>ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like
helical [Medicago truncatula] gi|355483175|gb|AES64378.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 727
Score = 294 bits (752), Expect = 4e-77
Identities = 163/343 (47%), Positives = 211/343 (61%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y AML TG G N+VM+V+L+SACGR AI +G Q+H T++K G DCY+ IQ TII+FYA
Sbjct: 304 IYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYA 363
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +DLA QFE+ KDHL SWNAL AGFI+N M+D A + FD+M RDVFSWS M+
Sbjct: 364 ACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISG 423
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ L F + L G + +VS +E + Y+R+ SIPF
Sbjct: 424 YAQSEHPKMALELFHKM-LAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPF 482
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT*N 702
NDNL AALIDMYAKCGSIN+ L+ F IR ++ + C GHA V +
Sbjct: 483 NDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSD 542
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
+ R + ITFI VL+AC HAGLVE G+R F++M+S +NV PDIKHYGCM+D
Sbjct: 543 MQRFH------IKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMID 596
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+M++SMPM+A +VIWGTL AAC H N++IG
Sbjct: 597 ILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIG 639
Score = 69.7 bits (169), Expect(2) = 2e-13
Identities = 32/118 (27%), Positives = 64/118 (54%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ ND+ LV++ISAC L + + +H ++K + ++H Y
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML 357
C + A F+ + +L +WN ++ G+ + +VD+A+++FD + ++DV SW M+
Sbjct: 232 LCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMI 289
Score = 33.5 bits (75), Expect(2) = 2e-13
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 354 VAGYMQTEQPTLALEIFQRMVASGVKPNEITMVSILSA 467
+ GY+Q + ALEI++ M+ +G PNE+ +V+++SA
Sbjct: 289 IDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSA 326
Score = 72.8 bits (177), Expect = 2e-10
Identities = 38/117 (32%), Positives = 64/117 (54%)
Frame = +1
Query: 10 NAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAAC 189
NA H +++ LV + +C L I +G+QIHS I K G IQ ++I+ YA C
Sbjct: 42 NARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKC 101
Query: 190 HKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLL 360
I A F+ + S N +++G++RN +D A+++FD MP + S++ M++
Sbjct: 102 GDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIM 158
>ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Solanum lycopersicum]
Length = 700
Score = 291 bits (746), Expect = 2e-76
Identities = 156/344 (45%), Positives = 211/344 (61%), Gaps = 9/344 (2%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAA 186
Y ML+TGL NDVM+VD +S CG++++ EG+Q H +K G + D IQATIIHFYAA
Sbjct: 310 YRDMLYTGLHPNDVMIVDFLSTCGQVMSNFEGRQFHGVAVKMGFNLLDFIQATIIHFYAA 369
Query: 187 CHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVI 366
C ++DLA QFE+ +KDH++ WNALIAG +RN +D+A+ +FD+MP RDVFSWS+M+
Sbjct: 370 CGEVDLARLQFEVGNKDHVACWNALIAGLVRNRKIDEARNLFDQMPARDVFSWSSMISGY 429
Query: 367 CRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIP 540
+ L F E +G N++ + +VSS+ KE YI NSIP
Sbjct: 430 SQSEQPDLALELFHEMLAIGVKPNEITMVSVVSSIAT---LGTLKEGRWTHDYICKNSIP 486
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRL-------TMECNYMWIGHAWTYKFVT* 699
NDNL AALIDMYAKC S+N LEVF IR++ + C GHA
Sbjct: 487 LNDNLMAALIDMYAKCASVNDALEVFNQIRKKAVDVSPWNAIICGLAMHGHAQL------ 540
Query: 700 NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMV 879
+L + + ITFI VL+AC HAGLV+ GE++F+SM ++NV+P+IKHYGCMV
Sbjct: 541 SLHIFSDMLRQNIKPNSITFIGVLSACCHAGLVDAGEQHFKSMTKLYNVKPNIKHYGCMV 600
Query: 880 DXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
D ++++SMPM+A ++IWGTL AAC H N +IG
Sbjct: 601 DLFGRAGRLKEAEELIRSMPMEADIIIWGTLLAACRTHGNTEIG 644
Score = 68.9 bits (167), Expect = 3e-09
Identities = 43/202 (21%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Frame = +1
Query: 1 TLYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFY 180
+++ M G+G N+V +V++ISA I + +H ++K G + + ++H Y
Sbjct: 176 SVFRDMRCFGVGPNEVTMVNVISAYLHCGGIKVDKMLHGLVLKVGVMDFVHVSTNLLHLY 235
Query: 181 AACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLL 360
+ A F + ++ SWN ++ G+ + +VD AK++F+++ ++DV SW ++
Sbjct: 236 CLGGCLKDARMLFNEMPEKNVVSWNVMLNGYAKAGLVDLAKEVFEQIVDKDVVSWGTIID 295
Query: 361 VICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNS 534
+ + L ++ +R+ G N + + +S+ + + ++ +++ + N
Sbjct: 296 GYLQAARLNDAVKRYRDMLYTGLHPNDVMIVDFLSTCGQVMSNFEGRQFHGVAVKMGFNL 355
Query: 535 IPFNDNLSAALIDMYAKCGSIN 600
+ F + A +I YA CG ++
Sbjct: 356 LDF---IQATIIHFYAACGEVD 374
Score = 63.9 bits (154), Expect = 1e-07
Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
LV +C +I GQQ+HS ++K+G I ++I FY C ++ A F+ +
Sbjct: 61 LVSAFKSCSANSSITHGQQLHSLVLKSGLQSNIFILNSLITFYVKCGLVNHAKIIFDSCN 120
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRYFRE 411
K S N ++ G+++ +D A ++FD+M ER+ S++ M++ + + FR+
Sbjct: 121 KLDAVSCNIMLCGYVKFGFLDDAYELFDKMTERNCVSYTTMIMGWVQKGFWSEGISVFRD 180
Query: 412 W*L--VGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDMYAK 585
VG N++ +V+ + +L K D+ + + + ++S L+ +Y
Sbjct: 181 MRCFGVGPNEVT---MVNVISAYLHCGGIKVDKMLHGLVLKVGVMDFVHVSTNLLHLYCL 237
Query: 586 CGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
G + +F + + + N M G+A
Sbjct: 238 GGCLKDARMLFNEMPEKNVVSWNVMLNGYA 267
>ref|XP_006339412.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Solanum tuberosum]
Length = 699
Score = 290 bits (743), Expect = 5e-76
Identities = 155/345 (44%), Positives = 211/345 (61%), Gaps = 9/345 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
+Y ML+TG+ NDVM+VD +S CG++++ EG+Q H +K G D D IQATIIHFYA
Sbjct: 308 IYRDMLYTGMRPNDVMIVDFLSTCGQVMSNFEGRQFHGVAVKMGFDLLDFIQATIIHFYA 367
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC ++DLA QFE+ +KDH++ WNALIAG +RN +D+A+ +FD+MP RDVFSWS+M+
Sbjct: 368 ACGEVDLARLQFEVGNKDHVACWNALIAGLVRNRKIDEARHLFDQMPARDVFSWSSMISG 427
Query: 364 ICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
+ L F E +G N++ + +VSS+ KE YI NSI
Sbjct: 428 YSQSEQPDLALELFHEMLAIGVKPNEITMVSVVSSIAT---LGTLKEGRWAHDYICKNSI 484
Query: 538 PFNDNLSAALIDMYAKCGSINTGLEVFYHIRRRL-------TMECNYMWIGHAWTYKFVT 696
P NDNLSAALIDMYAKC S+N LE+F IR + + C GHA
Sbjct: 485 PLNDNLSAALIDMYAKCASVNDALELFNQIREKAVDVSPWNAIICGLAMHGHAQL----- 539
Query: 697 *NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCM 876
+L + + ITFI VL+AC HAGLVE GE++F++M +H+V+P+IKHYGCM
Sbjct: 540 -SLHIFSDMLRQNIKPNSITFIGVLSACCHAGLVEAGEQHFQNMTKLHDVKPNIKHYGCM 598
Query: 877 VDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
VD ++++SM M+A ++IWGTL AAC H N +IG
Sbjct: 599 VDLFGRAGRLIEAEELIRSMSMEADIIIWGTLLAACRTHGNTEIG 643
Score = 68.6 bits (166), Expect = 4e-09
Identities = 49/211 (23%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
LV +C I GQQ+HS ++K+G + I ++I FY C ++ A F+ +
Sbjct: 60 LVSAFKSCSANSCITHGQQLHSLVLKSGLESNIFILNSLITFYVKCGLVNHAKIIFDSCN 119
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRP---SSLLWLLRY 402
K S N ++ G+++ +++A ++FD+M ER+ S++ M++ + + S +W+ R
Sbjct: 120 KLDAVSCNIMLCGYVKFGFLNEAYELFDKMTERNCVSYTTMIMGLIQKGFWSEGIWVFRD 179
Query: 403 FREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPFNDNLSAALIDMYA 582
R + VG N++ +V+ + +L K D+ + + + ++S L+ +Y
Sbjct: 180 MRYF-GVGPNEVT---MVNVISAYLHCGGIKVDKLLHGLVLKIGVMDFVHVSTNLLHLYC 235
Query: 583 KCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
G + + +F + + + N M G++
Sbjct: 236 LGGCLRDAMMLFSEMPEKNVVSWNVMLNGYS 266
Score = 65.9 bits (159), Expect = 3e-08
Identities = 42/201 (20%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M + G+G N+V +V++ISA I + +H ++K G + + ++H Y
Sbjct: 176 VFRDMRYFGVGPNEVTMVNVISAYLHCGGIKVDKLLHGLVLKIGVMDFVHVSTNLLHLYC 235
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
+ A F + ++ SWN ++ G+ + +VD AK +F+++ ++DV SW ++
Sbjct: 236 LGGCLRDAMMLFSEMPEKNVVSWNVMLNGYSKAGLVDLAKDVFEQIVDKDVVSWGTIIDG 295
Query: 364 ICRPSSLLWLLRYFREW*LVG--SNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSI 537
+ + L + +R+ G N + + +S+ + + ++ +++ + + +
Sbjct: 296 YLQAARLNDAVEIYRDMLYTGMRPNDVMIVDFLSTCGQVMSNFEGRQFHGVAVKMGFDLL 355
Query: 538 PFNDNLSAALIDMYAKCGSIN 600
F + A +I YA CG ++
Sbjct: 356 DF---IQATIIHFYAACGEVD 373
>ref|XP_007147782.1| hypothetical protein PHAVU_006G154600g [Phaseolus vulgaris]
gi|561021005|gb|ESW19776.1| hypothetical protein
PHAVU_006G154600g [Phaseolus vulgaris]
Length = 715
Score = 286 bits (731), Expect = 1e-74
Identities = 156/343 (45%), Positives = 210/343 (61%), Gaps = 7/343 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ AML TGL N++++V+L+SACGRL AIG+G Q+H ++K G DCY+ IQ TIIHFYA
Sbjct: 323 MHRAMLRTGLAPNEIVVVNLVSACGRLNAIGDGWQLHGIVVKKGFDCYNFIQTTIIHFYA 382
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +DLA QFE+ KDHL SWNAL++GFI+N M+D A+++F+EMPERDVFSWS M+
Sbjct: 383 ACGIMDLACLQFEVGVKDHLESWNALVSGFIKNGMMDPARKMFEEMPERDVFSWSTMISG 442
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNSIPF 543
+ + F++ G ++ +VS KE Y+ SIP
Sbjct: 443 YAQTDQSRMAIELFQKMVASGIKPNEVT-MVSVFSAIATIGSLKEGRWAHEYMCIESIPL 501
Query: 544 NDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT*N 702
NDNL AA+IDMY+KCGSIN+ L+ F R + + + C GH V +
Sbjct: 502 NDNLRAAIIDMYSKCGSINSALQFFNKNRDKTSSVSPWNAIICGLASHGHGSMCLEVFSD 561
Query: 703 LFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVD 882
+ R + ITFI VL+AC HAGLVE G + F+ M+S++NV PDIKHYGC+VD
Sbjct: 562 MQRYN------IKPNAITFIGVLSACCHAGLVEPGRKLFKIMKSVYNVEPDIKHYGCLVD 615
Query: 883 XXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
+M++SMPMKA +VIWGTL AAC H N+ IG
Sbjct: 616 LLGRAGLLEEAEEMLRSMPMKADIVIWGTLLAACRTHGNVHIG 658
Score = 66.2 bits (160), Expect = 2e-08
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ ND+ LV++I AC I + IH+ IK + ++ Y
Sbjct: 191 VFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHALAIKLVLEGLVLFSTNLMRAYC 250
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAM--- 354
C + A F+ + ++ SWN ++ G+ + +VD A+++F+ +P++DV SW M
Sbjct: 251 LCSGVREARRLFDKMPEVNVVSWNVMLNGYAKEGLVDMARELFERIPDKDVISWGTMIDG 310
Query: 355 -LLVICRPSSLL 387
LL+ C +L+
Sbjct: 311 YLLMNCLHEALM 322
>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 277 bits (708), Expect = 6e-72
Identities = 161/344 (46%), Positives = 214/344 (62%), Gaps = 8/344 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
LY+AM + L N+V++VDL+SACG+ ++I EG+Q HS I+K G C+D IQATII FYA
Sbjct: 312 LYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYA 371
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +IDLAY Q+++S K HL+S N +I GF +N M+DQA+QIFD MPE+DVFSWS M+
Sbjct: 372 ACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISG 431
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIP 540
+ L F ++ S + + S+ + A K E Y+ N IP
Sbjct: 432 YAQNELPDVALDLFHG--MIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIP 489
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT* 699
NDNLSAA+IDMYAKCGSI+T L+VF I+ + + + C GHA +
Sbjct: 490 LNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFS 549
Query: 700 NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMV 879
NL R + LNS ITF+ VL+AC HAGLVE GERYF SM++ H V P+IKHYGC+V
Sbjct: 550 NLQR----RSIKLNS--ITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLV 603
Query: 880 DXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
D ++V++MPMKA VVIWGTL A+ H ++IG
Sbjct: 604 DLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIG 647
Score = 75.1 bits (183), Expect = 4e-11
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ N+V + ++SAC + I + +H+ +IK I ++H Y
Sbjct: 180 VFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYC 239
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML-- 357
+ F + SWN ++ G++++ +VDQA+++F+ +PERDVFSW+ M+
Sbjct: 240 VFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDG 299
Query: 358 -LVICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNS 534
+ + R L L R+ L N++ + L+S+ + ++ S+ ++N
Sbjct: 300 FVQMKRLRKALLLYSAMRKSDL-HPNEVLIVDLLSACGQSVSIEEGRQFH--SLIVKNGF 356
Query: 535 IPFNDNLSAALIDMYAKCGSIN 600
+ F D + A +I YA C I+
Sbjct: 357 VCF-DFIQATIISFYAACRRID 377
Score = 72.4 bits (176), Expect = 3e-10
Identities = 62/291 (21%), Positives = 126/291 (43%), Gaps = 33/291 (11%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ +V + C AI GQQIH+ ++K G + I ++I+ Y C + A F+
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
S S N +++G+++ ++ A+Q+F +MPER S++ M+L + + +
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 403 FREW*LVG--SNQMKLQ------------W------------------LVSSLQLHLWAY 486
F++ G N++ + W L+S+ LH++
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 487 WKKEDEPISIYIRNNSIPFNDNLS-AALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMW 663
+ + ++ N +P + +S ++ Y K G ++ E+F I R M
Sbjct: 241 FSSLKDTKRLF---NEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMI 297
Query: 664 IGHAWTYKFVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERY 816
G K + L + +KS L+ ++ + +L+AC + +EEG ++
Sbjct: 298 DGFV-QMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQF 347
>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 277 bits (708), Expect = 6e-72
Identities = 161/344 (46%), Positives = 214/344 (62%), Gaps = 8/344 (2%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
LY+AM + L N+V++VDL+SACG+ ++I EG+Q HS I+K G C+D IQATII FYA
Sbjct: 483 LYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYA 542
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
AC +IDLAY Q+++S K HL+S N +I GF +N M+DQA+QIFD MPE+DVFSWS M+
Sbjct: 543 ACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISG 602
Query: 364 ICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIP 540
+ L F ++ S + + S+ + A K E Y+ N IP
Sbjct: 603 YAQNELPDVALDLFHG--MIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIP 660
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT-------MECNYMWIGHAWTYKFVT* 699
NDNLSAA+IDMYAKCGSI+T L+VF I+ + + + C GHA +
Sbjct: 661 LNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFS 720
Query: 700 NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMV 879
NL R + LNS ITF+ VL+AC HAGLVE GERYF SM++ H V P+IKHYGC+V
Sbjct: 721 NLQR----RSIKLNS--ITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLV 774
Query: 880 DXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDIG 1011
D ++V++MPMKA VVIWGTL A+ H ++IG
Sbjct: 775 DLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIG 818
Score = 75.1 bits (183), Expect = 4e-11
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
++ M G+ N+V + ++SAC + I + +H+ +IK I ++H Y
Sbjct: 351 VFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYC 410
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAML-- 357
+ F + SWN ++ G++++ +VDQA+++F+ +PERDVFSW+ M+
Sbjct: 411 VFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDG 470
Query: 358 -LVICRPSSLLWLLRYFREW*LVGSNQMKLQWLVSSLQLHLWAYWKKEDEPISIYIRNNS 534
+ + R L L R+ L N++ + L+S+ + ++ S+ ++N
Sbjct: 471 FVQMKRLRKALLLYSAMRKSDL-HPNEVLIVDLLSACGQSVSIEEGRQFH--SLIVKNGF 527
Query: 535 IPFNDNLSAALIDMYAKCGSIN 600
+ F D + A +I YA C I+
Sbjct: 528 VCF-DFIQATIISFYAACRRID 548
Score = 72.4 bits (176), Expect = 3e-10
Identities = 62/291 (21%), Positives = 126/291 (43%), Gaps = 33/291 (11%)
Frame = +1
Query: 43 DVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFE 222
++ +V + C AI GQQIH+ ++K G + I ++I+ Y C + A F+
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 223 LSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRY 402
S S N +++G+++ ++ A+Q+F +MPER S++ M+L + + +
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 403 FREW*LVG--SNQMKLQ------------W------------------LVSSLQLHLWAY 486
F++ G N++ + W L+S+ LH++
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 487 WKKEDEPISIYIRNNSIPFNDNLS-AALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMW 663
+ + ++ N +P + +S ++ Y K G ++ E+F I R M
Sbjct: 412 FSSLKDTKRLF---NEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMI 468
Query: 664 IGHAWTYKFVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERY 816
G K + L + +KS L+ ++ + +L+AC + +EEG ++
Sbjct: 469 DGFV-QMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQF 518
>ref|XP_006400456.1| hypothetical protein EUTSA_v10012849mg [Eutrema salsugineum]
gi|557101546|gb|ESQ41909.1| hypothetical protein
EUTSA_v10012849mg [Eutrema salsugineum]
Length = 692
Score = 265 bits (678), Expect = 2e-68
Identities = 153/344 (44%), Positives = 205/344 (59%), Gaps = 10/344 (2%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAA 186
Y ML G+ ++VM+VDL+SA R +G Q+H TI+KTG DCYD IQATIIHFYA
Sbjct: 300 YTEMLRRGMKPSEVMMVDLLSASARSGGSSKGLQLHGTIVKTGFDCYDFIQATIIHFYAV 359
Query: 187 CHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVI 366
I+ A QFE S KDH++S NALIAGF++N MV+QA+++FD+ ++D+FSW+AM+
Sbjct: 360 SDNIEQAIQQFEASIKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMISGY 419
Query: 367 CRPSSLLWLLRYFREW*LVGSNQMKLQ--WLVSSLQLHLWAYWKKEDEPISIYIRNNSIP 540
+ SS L FRE ++ S Q K +VS +E + Y+ +SIP
Sbjct: 420 AQSSSPHLALHLFRE--MISSCQTKPDAITMVSVFSAISSLGSLEEGKRAHEYLNTSSIP 477
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLT--------MECNYMWIGHAWTYKFVT 696
+DNL+AA+IDMYAKCGSI T L VF + + + C GHA K
Sbjct: 478 PSDNLTAAIIDMYAKCGSIETALNVFRQTKNISSSTISPWNAIICGSATHGHA---KLAL 534
Query: 697 *NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCM 876
F +QS + ITF+ VL+AC HAGLVE G+ YF SM+S + + PDIKHYGCM
Sbjct: 535 DLYFDLQSLP---IRPNSITFVGVLSACCHAGLVELGKTYFESMKSSYGIEPDIKHYGCM 591
Query: 877 VDXXXXXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDI 1008
VD +M+K MPMKA V+IWG L +A IH N+++
Sbjct: 592 VDLLGKAGRLEEAKEMIKKMPMKADVIIWGILLSASRIHRNVEV 635
Score = 82.8 bits (203), Expect = 2e-13
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 36/306 (11%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
L+ M + G+ N+V L +ISAC L I + + + S +K D + ++H Y
Sbjct: 167 LFKEMRNLGIMLNEVTLATIISACSHLGGIWDCRMLQSLAMKLKLDDRVFVSTNLLHMYC 226
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A F+ + +L +WN ++ G+ + +++QAK +FD++ E+D+ SW M+
Sbjct: 227 VCSSLKDARHLFDEMPERNLVTWNVMLNGYSKAGLIEQAKDLFDQITEKDIVSWGTMIDG 286
Query: 364 ICRPSSLLWLLRYFREW*LVG---SNQMKLQWLVSS---------LQLH----------- 474
R + L L ++ E G S M + L +S LQLH
Sbjct: 287 CLRKNKLDEALVFYTEMLRRGMKPSEVMMVDLLSASARSGGSSKGLQLHGTIVKTGFDCY 346
Query: 475 -----LWAYWKKEDEPISIYIRNNSIPFNDNLSA--ALIDMYAKCGSINTGLEVFYHIRR 633
++ + I I+ D++++ ALI + K G + EVF R
Sbjct: 347 DFIQATIIHFYAVSDNIEQAIQQFEASIKDHIASRNALIAGFVKNGMVEQAREVFDQTRD 406
Query: 634 RLTMECNYMWIGHAWTYK-FVT*NLFRIQSWKKSILNSTQ-----ITFIRVLTACRHAGL 795
+ N M G+A + + +LFR +++S Q IT + V +A G
Sbjct: 407 KDIFSWNAMISGYAQSSSPHLALHLFR------EMISSCQTKPDAITMVSVFSAISSLGS 460
Query: 796 VEEGER 813
+EEG+R
Sbjct: 461 LEEGKR 466
Score = 71.6 bits (174), Expect = 5e-10
Identities = 51/211 (24%), Positives = 102/211 (48%), Gaps = 3/211 (1%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
LV + +C + G+QIH ++K G D I ++++ YA C + A S F +
Sbjct: 51 LVSALGSCASSNDVTCGRQIHCRVLKCGFDSNVFICNSVLNMYAKCRLLADAESVFRSHA 110
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRYFRE 411
K +S+N ++ G++R+ + A ++FD MPER S++ ++ + + F+E
Sbjct: 111 KLDSASFNIMVDGYVRSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNDQWSEAMELFKE 170
Query: 412 W*LVG--SNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIPFNDNLSAALIDMYA 582
+G N++ L ++S+ HL W + + +++ ++ + F +S L+ MY
Sbjct: 171 MRNLGIMLNEVTLATIISACS-HLGGIWDCRMLQSLAMKLKLDDRVF---VSTNLLHMYC 226
Query: 583 KCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
C S+ +F + R + N M G++
Sbjct: 227 VCSSLKDARHLFDEMPERNLVTWNVMLNGYS 257
>ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319761|gb|EFH50183.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 939
Score = 265 bits (676), Expect = 3e-68
Identities = 147/339 (43%), Positives = 207/339 (61%), Gaps = 5/339 (1%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAA 186
Y ML G+ ++VM+VDL+SA R + +G Q+H TI+K G DCYD +QATIIHFYA
Sbjct: 547 YTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAV 606
Query: 187 CHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVI 366
+ + LA QFE+S KDH++S NALIAGF++N MV+QA+++FD+ ++D+FSW+AM+
Sbjct: 607 SNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGY 666
Query: 367 CRPSSLLWLLRYFREW*LVGSNQMKLQ--WLVSSLQLHLWAYWKKEDEPISIYIRNNSIP 540
+ S L FRE ++ S+Q+K +VS +E + Y+ +SIP
Sbjct: 667 AQSLSPQLALHLFRE--MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIP 724
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMEC---NYMWIGHAWTYKFVT*NLFR 711
NDNL AA+I+MYAKCGSI T L +F+ + + N + G A T+ L
Sbjct: 725 PNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSA-THGHAKLALDL 783
Query: 712 IQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVDXXX 891
+ + ITF+ VL+AC HAGLVE G+ YF SM+S H + PDIKHYGCMVD
Sbjct: 784 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 843
Query: 892 XXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDI 1008
+M+K+MP+KA V+IWG L +A IH N++I
Sbjct: 844 KSGKLEEAKEMIKNMPVKADVMIWGMLLSASRIHGNVEI 882
Score = 86.3 bits (212), Expect = 2e-14
Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 31/301 (10%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
L+ M + G+ N+V L +ISAC L I + + +HS IK D ++ Y
Sbjct: 414 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYC 473
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A F+ + +L +WN ++ G+ + +++QAK++FD++ E+D+ SW M+
Sbjct: 474 ICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMIDG 533
Query: 364 ICRPSSLLWLLRYFREW*LVG---SNQMKLQWLVSS---------LQLH----------- 474
R + L L Y+ E G S M + L +S LQLH
Sbjct: 534 CLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCY 593
Query: 475 -----LWAYWKKEDEPISIYIRNNSIPFNDNLSA--ALIDMYAKCGSINTGLEVFYHIRR 633
++ + + ++ + D++++ ALI + K G + EVF R
Sbjct: 594 DFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRD 653
Query: 634 RLTMECNYMWIGHAWTYK-FVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGE 810
+ N M G+A + + +LFR + S + IT + V +A G +EEG+
Sbjct: 654 KDIFSWNAMMSGYAQSLSPQLALHLFR-EMISSSQVKPDAITMVSVFSAISSLGSLEEGK 712
Query: 811 R 813
R
Sbjct: 713 R 713
Score = 73.6 bits (179), Expect = 1e-10
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 3/211 (1%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
LV + +C + G+QIH ++K+GHD I ++++ YA C + A S F +
Sbjct: 298 LVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAHA 357
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRYFRE 411
K +S+N ++ G+ R+ + A ++FD MPER S++ ++ + + + FRE
Sbjct: 358 KLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 417
Query: 412 W*LVG--SNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIPFNDNLSAALIDMYA 582
+G N++ L ++S+ HL W K ++I + + F S L+ MY
Sbjct: 418 MRNLGIMLNEVTLATVISACS-HLGGIWDCKMLHSLAIKLNLDDRVF---ASTNLLLMYC 473
Query: 583 KCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
C + ++F + R + N M G++
Sbjct: 474 ICSCLKDARKLFDEMPERNLVTWNVMLNGYS 504
>ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor
18 [Arabidopsis thaliana]
Length = 685
Score = 263 bits (671), Expect = 1e-67
Identities = 147/339 (43%), Positives = 205/339 (60%), Gaps = 5/339 (1%)
Frame = +1
Query: 7 YNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAA 186
Y ML G+ ++VM+VDL+SA R + +G Q+H TI+K G DCYD +QATIIHFYA
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAV 352
Query: 187 CHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVI 366
+ I LA QFE S KDH++S NALIAGF++N MV+QA+++FD+ ++D+FSW+AM+
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY 412
Query: 367 CRPSSLLWLLRYFREW*LVGSNQMKLQ--WLVSSLQLHLWAYWKKEDEPISIYIRNNSIP 540
+ S L FRE ++ S+Q+K +VS +E + Y+ ++IP
Sbjct: 413 AQSLSPQLALHLFRE--MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470
Query: 541 FNDNLSAALIDMYAKCGSINTGLEVFYHIRRRLTMECNYMW---IGHAWTYKFVT*NLFR 711
NDNL+AA+IDMYAKCGSI T L +F H + ++ W I + T+ L
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIF-HQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 712 IQSWKKSILNSTQITFIRVLTACRHAGLVEEGERYFRSMRSMHNVRPDIKHYGCMVDXXX 891
+ + ITF+ VL+AC HAGLVE G+ YF SM+S H + PDIKHYGCMVD
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 892 XXXXXXXXXKMVKSMPMKAYVVIWGTLFAACIIHSNMDI 1008
+M+K MP+KA V+IWG L +A H N++I
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEI 628
Score = 82.8 bits (203), Expect = 2e-13
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 31/301 (10%)
Frame = +1
Query: 4 LYNAMLHTGLGSNDVMLVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYA 183
L+ M + G+ N+V L +ISAC L I + + + S IK + + ++H Y
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 184 ACHKIDLAYSQFELSSKDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLV 363
C + A F+ + +L +WN ++ G+ + +++QA+++FD++ E+D+ SW M+
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 364 ICRPSSLLWLLRYFREW*LVG---SNQMKLQWLVSS---------LQLH-------LWAY 486
R + L L Y+ E G S M + L +S LQLH Y
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCY 339
Query: 487 WKKEDEPISIYIRNNSIPF---------NDNLSA--ALIDMYAKCGSINTGLEVFYHIRR 633
+ I Y +N I D++++ ALI + K G + EVF
Sbjct: 340 DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 634 RLTMECNYMWIGHAWTYK-FVT*NLFRIQSWKKSILNSTQITFIRVLTACRHAGLVEEGE 810
+ N M G+A + + +LFR + S + IT + V +A G +EEG+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFR-EMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 811 R 813
R
Sbjct: 459 R 459
Score = 69.3 bits (168), Expect = 2e-09
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
Frame = +1
Query: 52 LVDLISACGRLLAIGEGQQIHSTIIKTGHDCYDSIQATIIHFYAACHKIDLAYSQFELSS 231
LV + +C + G+QIH ++K+G D I ++++ YA C + A S F +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 232 KDHLSSWNALIAGFIRNEMVDQAKQIFDEMPERDVFSWSAMLLVICRPSSLLWLLRYFRE 411
K +S+N ++ G++R+ + A ++FD MPER S++ ++ + + + FRE
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 412 W*LVG--SNQMKLQWLVSSLQLHLWAYWK-KEDEPISIYIRNNSIPFNDNLSAALIDMYA 582
+G N++ L ++S+ HL W + + ++I ++ F +S L+ MY
Sbjct: 164 MRNLGIMLNEVTLATVISACS-HLGGIWDCRMLQSLAIKLKLEGRVF---VSTNLLHMYC 219
Query: 583 KCGSINTGLEVFYHIRRRLTMECNYMWIGHA 675
C + ++F + R + N M G++
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYS 250