BLASTX nr result
ID: Paeonia23_contig00002068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia23_contig00002068 (726 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 196 9e-48 ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac... 193 6e-47 ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 191 2e-46 gb|ABK26380.1| unknown [Picea sitchensis] 191 2e-46 ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 189 8e-46 emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera] 183 5e-44 ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 182 8e-44 ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2... 182 8e-44 ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr... 182 1e-43 ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 182 1e-43 ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 181 2e-43 ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 181 2e-43 ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 181 3e-43 ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 181 3e-43 ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 180 5e-43 ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 179 7e-43 ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrat... 179 7e-43 ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8... 179 9e-43 ref|XP_004514482.1| PREDICTED: DNA-directed RNA polymerases I, I... 177 4e-42 dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 177 4e-42 >ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 1 [Vitis vinifera] gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 2 [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed protein product [Vitis vinifera] Length = 145 Score = 196 bits (497), Expect = 9e-48 Identities = 93/134 (69%), Positives = 113/134 (84%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+ GEK+A++ A+TLDL+GT Sbjct: 10 FKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY RKSLADK+EYVMHGKLYK +E+GSGPNVK +Y+SFGGLLM+L G N Sbjct: 70 PDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANT 129 Query: 43 NKFSLDQRLFLLMR 2 K LDQR+FLL+R Sbjct: 130 AKLDLDQRVFLLIR 143 >ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao] gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao] Length = 145 Score = 193 bits (490), Expect = 6e-47 Identities = 91/134 (67%), Positives = 113/134 (84%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV RIEARS+ D++M LDVN+EIYP+ G+K+ +A A TL+L+GT Sbjct: 11 FVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLNLDGT 70 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY PG RKSLADKYEYVMHGKLYK ++ GSG +K E+Y+S+GGLLM+LRG A + Sbjct: 71 PDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGEASHV 129 Query: 43 NKFSLDQRLFLLMR 2 ++F LDQRLFLLMR Sbjct: 130 SQFELDQRLFLLMR 143 >ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina] gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Citrus sinensis] gi|557545143|gb|ESR56121.1| hypothetical protein CICLE_v10022723mg [Citrus clementina] Length = 146 Score = 191 bits (486), Expect = 2e-46 Identities = 86/134 (64%), Positives = 112/134 (83%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F VE++DPDGKKFDKV+RIEA S+ D+YM LDVN+E+YP+R G+K+ +A A TL+L+GT Sbjct: 11 FVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGT 70 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY PG RK+LADKYEY+MHGKL+K ++GSG ++K E+Y+S+GGLLM+L+G Sbjct: 71 PDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYV 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >gb|ABK26380.1| unknown [Picea sitchensis] Length = 145 Score = 191 bits (486), Expect = 2e-46 Identities = 93/134 (69%), Positives = 109/134 (81%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV R+DPDGKKFDKV+RIEARSE+ D+YM LDVN ++YP+ GEK+AVA A TL+L+GT Sbjct: 10 FTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVALAPTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PD GY+ G RKSLADKYEYVM+GKLY +E+GSG NVK E+ SFGGLLMLL+G N Sbjct: 70 PDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLMLLKGDPSNA 129 Query: 43 NKFSLDQRLFLLMR 2 F LDQRLFLLMR Sbjct: 130 GNFELDQRLFLLMR 143 >ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide, putative [Ricinus communis] gi|223530164|gb|EEF32075.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide, putative [Ricinus communis] Length = 146 Score = 189 bits (480), Expect = 8e-46 Identities = 89/134 (66%), Positives = 110/134 (82%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV+RIEA S+ D++M LDVNTEIYP+ G+K+ +A A TL+L+GT Sbjct: 11 FVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTLNLDGT 70 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY G RK+LADKYEY+M+GKLYK +E+GSG VK EM +S+GGLLMLLRG + Sbjct: 71 PDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRGDPSHV 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera] Length = 305 Score = 183 bits (465), Expect = 5e-44 Identities = 95/156 (60%), Positives = 114/156 (73%), Gaps = 22/156 (14%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+ GEK+A++ A+TLDL+GT Sbjct: 10 FKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGT 69 Query: 223 PDTGYYNP----GM------------------RKSLADKYEYVMHGKLYKFAEQGSGPNV 110 PDTGYY GM RKSLADK+EYVMHGKLYK +E+GSGPNV Sbjct: 70 PDTGYYTQVKCCGMVVXLARTKRITAAVRVAGRKSLADKFEYVMHGKLYKISEEGSGPNV 129 Query: 109 KTEMYISFGGLLMLLRGGAENFNKFSLDQRLFLLMR 2 K +Y+SFGGLLM+L G N K LDQR FLL+R Sbjct: 130 KGVIYVSFGGLLMMLSGDPANTAKLDLDQRXFLLIR 165 Score = 122 bits (305), Expect = 2e-25 Identities = 59/106 (55%), Positives = 77/106 (72%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V+ DP GKKFDKV+RIEA SE+ D++MQLDVN E YPI+ GEK+ + A TL L+G Sbjct: 198 FVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLHLDGA 257 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISF 86 T Y+ G KSLADK++YVM+G +YK + +GSGP+VK + I F Sbjct: 258 DVTDYFTQGEXKSLADKFDYVMYGIIYKVSNEGSGPDVKGYISILF 303 >ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 [Oryza brachyantha] gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X2 [Oryza brachyantha] gi|573948245|ref|XP_006656429.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X3 [Oryza brachyantha] gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X4 [Oryza brachyantha] gi|573948249|ref|XP_006656431.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X5 [Oryza brachyantha] Length = 146 Score = 182 bits (463), Expect = 8e-44 Identities = 88/135 (65%), Positives = 107/135 (79%), Gaps = 1/135 (0%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+RPG+K+ + A TL+L+GT Sbjct: 10 FTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVLAPTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPN-VKTEMYISFGGLLMLLRGGAEN 47 PD G+Y RK+LADKY+YVMHGKLYK +E GSG K E+Y SFGGLLM+L+G Sbjct: 70 PDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLLMMLKGDPST 129 Query: 46 FNKFSLDQRLFLLMR 2 F LDQRLFLL+R Sbjct: 130 AANFELDQRLFLLIR 144 >ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|297817262|ref|XP_002876514.1| hypothetical protein ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata] gi|565468254|ref|XP_006292007.1| hypothetical protein CARUB_v10018195mg [Capsella rubella] gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName: Full=DNA-directed RNA polymerases II, IV and V subunit 8B; AltName: Full=RNA polymerase Rpb8 gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II subunit, putative [Arabidopsis thaliana] gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis thaliana] gi|30793811|gb|AAP40358.1| unknown protein [Arabidopsis thaliana] gi|297322352|gb|EFH52773.1| hypothetical protein ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|482560714|gb|EOA24905.1| hypothetical protein CARUB_v10018195mg [Capsella rubella] Length = 146 Score = 182 bits (463), Expect = 8e-44 Identities = 84/134 (62%), Positives = 108/134 (80%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum] gi|567183404|ref|XP_006402675.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum] gi|557103773|gb|ESQ44127.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum] gi|557103774|gb|ESQ44128.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum] Length = 146 Score = 182 bits (462), Expect = 1e-43 Identities = 85/134 (63%), Positives = 107/134 (79%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEYVMHGKLYK E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYVMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum] gi|557098120|gb|ESQ38556.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum] Length = 146 Score = 182 bits (461), Expect = 1e-43 Identities = 84/134 (62%), Positives = 107/134 (79%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEY+MHGKLYK E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYIMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor] gi|241917379|gb|EER90523.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor] Length = 145 Score = 181 bits (460), Expect = 2e-43 Identities = 87/134 (64%), Positives = 103/134 (76%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V RLDPDGKKFD+V+R+EARSE+ +YMQLDV T++YP++P EK+ + A TL+L+GT Sbjct: 10 FVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVLAPTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY RK+LAD YEYVMHGKLYK +E S N K E+Y SFGGLLMLLRG Sbjct: 70 PDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTA 129 Query: 43 NKFSLDQRLFLLMR 2 F LDQRLFLLMR Sbjct: 130 ASFELDQRLFLLMR 143 >ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like isoform 1 [Solanum lycopersicum] gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3-like isoform 2 [Solanum lycopersicum] Length = 145 Score = 181 bits (459), Expect = 2e-43 Identities = 85/134 (63%), Positives = 111/134 (82%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV + DPDGKKFD+VNRIEARSE+ D++M LDVNTEIYP+R +K+ + A+TL+L+GT Sbjct: 10 FTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVLASTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ G +KSLADK+EYVMHGKLY+ +E+GSG +VK ++++SFGGLLM LRG Sbjct: 70 PDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIA 129 Query: 43 NKFSLDQRLFLLMR 2 KF LDQ++FLL+R Sbjct: 130 AKFELDQKIFLLIR 143 >ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Solanum tuberosum] Length = 145 Score = 181 bits (458), Expect = 3e-43 Identities = 84/134 (62%), Positives = 111/134 (82%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV + DPDGKKFD+VNRIEARSE+ D++M LD+NTEIYP+R +K+ + A+TL+L+GT Sbjct: 10 FTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVLASTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ G +KSLADK+EYVMHGKLY+ +E+GSG +VK ++++SFGGLLM LRG Sbjct: 70 PDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIA 129 Query: 43 NKFSLDQRLFLLMR 2 KF LDQ++FLL+R Sbjct: 130 AKFELDQKIFLLIR 143 >ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor] gi|241919960|gb|EER93104.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor] Length = 145 Score = 181 bits (458), Expect = 3e-43 Identities = 88/134 (65%), Positives = 102/134 (76%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V RLDPDGKKFDKV+R+EARSE+ +YMQLDV T++YP+R GEK+ + A TL+L+GT Sbjct: 10 FIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVLAPTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGYY RK+LAD YEYVM GKLYK +E S N K E+Y SFGGLLMLLRG Sbjct: 70 PDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTA 129 Query: 43 NKFSLDQRLFLLMR 2 F LDQRLFLLMR Sbjct: 130 ASFELDQRLFLLMR 143 >ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B-like [Oryza brachyantha] Length = 147 Score = 180 bits (456), Expect = 5e-43 Identities = 86/136 (63%), Positives = 108/136 (79%), Gaps = 2/136 (1%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV RLDPDGKKFD+V+RIEAR+E+ ++YMQLDV T++YP+ PG+K+ + TL+L+GT Sbjct: 10 FTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVLVPTLNLDGT 69 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAE--QGSGPNVKTEMYISFGGLLMLLRGGAE 50 PDTG++ RK+LADKYEYVMHGKLYK +E + SG N K EMY SFGGLLM+L+G Sbjct: 70 PDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGLLMMLKGDPS 129 Query: 49 NFNKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 130 SAANFELDQRLFLLMR 145 >ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella] gi|482574468|gb|EOA38655.1| hypothetical protein CARUB_v10010575mg [Capsella rubella] Length = 146 Score = 179 bits (455), Expect = 7e-43 Identities = 83/134 (61%), Positives = 106/134 (79%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V +LDPDGKKFDKV R+EA S +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata] gi|297337642|gb|EFH68059.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata] Length = 146 Score = 179 bits (455), Expect = 7e-43 Identities = 82/134 (61%), Positives = 107/134 (79%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV R++A S +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVDKLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8A [Arabidopsis thaliana] gi|75100070|sp|O81097.1|RPB8A_ARATH RecName: Full=DNA-directed RNA polymerases II and V subunit 8A; AltName: Full=RNA polymerase I, II and III 16.5 kDa subunit; Short=AtRPABC16.5 gi|4585968|gb|AAD25604.1|AC005287_6 RNA polymerase I, II and III 16.5 kDa subunit [Arabidopsis thaliana] gi|3372230|gb|AAC28252.1| RNA polymerase I, II and III 16.5 kDa subunit [Arabidopsis thaliana] gi|21555812|gb|AAM63939.1| RNA polymerase II subunit, putative [Arabidopsis thaliana] gi|28466897|gb|AAO44057.1| At1g54250 [Arabidopsis thaliana] gi|110735704|dbj|BAE99832.1| RNA polymerase I, II and III 16.5 kDa subunit [Arabidopsis thaliana] gi|332194950|gb|AEE33071.1| RNA polymerase Rpb8 [Arabidopsis thaliana] Length = 146 Score = 179 bits (454), Expect = 9e-43 Identities = 82/134 (61%), Positives = 107/134 (79%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 F V++LDPDGKKFDKV R++A S +++M LDVNTE+YP+ G+K+ +A A TL+L+GT Sbjct: 12 FVVDQLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPTLNLDGT 71 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44 PDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+G + Sbjct: 72 PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130 Query: 43 NKFSLDQRLFLLMR 2 + F LDQRLFLLMR Sbjct: 131 SHFELDQRLFLLMR 144 >ref|XP_004514482.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Cicer arietinum] Length = 144 Score = 177 bits (448), Expect = 4e-42 Identities = 87/135 (64%), Positives = 111/135 (82%), Gaps = 1/135 (0%) Frame = -3 Query: 403 FTVERLDPDGKK-FDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEG 227 F +E+L+PD KK F+KVNRIEARSE+ D++MQLD+N+E+YP++ G+K+ + A TL+ +G Sbjct: 10 FRIEKLNPDDKKLFEKVNRIEARSEKFDMFMQLDINSELYPLKAGQKFTLVLAPTLNPDG 69 Query: 226 TPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAEN 47 TPDTGYYNPG R+S+AD YEYVM+GKLY+ E GSG K E+YISFGGLLMLLRG + Sbjct: 70 TPDTGYYNPGNRQSIADDYEYVMYGKLYRVTE-GSG-REKAELYISFGGLLMLLRGDHSH 127 Query: 46 FNKFSLDQRLFLLMR 2 NKF LDQRL+LLMR Sbjct: 128 CNKFELDQRLYLLMR 142 >dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza sativa Japonica Group] Length = 396 Score = 177 bits (448), Expect = 4e-42 Identities = 85/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%) Frame = -3 Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224 FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+R G+++ + A TL+L+GT Sbjct: 260 FTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGT 319 Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAE-QGSGPNVKTEMYISFGGLLMLLRGGAEN 47 PDTG+Y RK+LADK++YVMHGKLYK +E SG K E+Y SFGGLLM+L+G + Sbjct: 320 PDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSS 379 Query: 46 FNKFSLDQRLFLLMR 2 F LDQRLFLL+R Sbjct: 380 AASFELDQRLFLLIR 394