BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00002068
         (726 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   196   9e-48
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac...   193   6e-47
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   191   2e-46
gb|ABK26380.1| unknown [Picea sitchensis]                             191   2e-46
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   189   8e-46
emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera]   183   5e-44
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   182   8e-44
ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2...   182   8e-44
ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr...   182   1e-43
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr...   182   1e-43
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   181   2e-43
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   181   2e-43
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   181   3e-43
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   181   3e-43
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   180   5e-43
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps...   179   7e-43
ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrat...   179   7e-43
ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8...   179   9e-43
ref|XP_004514482.1| PREDICTED: DNA-directed RNA polymerases I, I...   177   4e-42
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   177   4e-42

>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  196 bits (497), Expect = 9e-48
 Identities = 93/134 (69%), Positives = 113/134 (84%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+  GEK+A++ A+TLDL+GT
Sbjct: 10  FKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY    RKSLADK+EYVMHGKLYK +E+GSGPNVK  +Y+SFGGLLM+L G   N 
Sbjct: 70  PDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANT 129

Query: 43  NKFSLDQRLFLLMR 2
            K  LDQR+FLL+R
Sbjct: 130 AKLDLDQRVFLLIR 143


>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
           gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
           1 [Theobroma cacao]
          Length = 145

 Score =  193 bits (490), Expect = 6e-47
 Identities = 91/134 (67%), Positives = 113/134 (84%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV RIEARS+  D++M LDVN+EIYP+  G+K+ +A A TL+L+GT
Sbjct: 11  FVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLNLDGT 70

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY PG RKSLADKYEYVMHGKLYK ++ GSG  +K E+Y+S+GGLLM+LRG A + 
Sbjct: 71  PDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGEASHV 129

Query: 43  NKFSLDQRLFLLMR 2
           ++F LDQRLFLLMR
Sbjct: 130 SQFELDQRLFLLMR 143


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  191 bits (486), Expect = 2e-46
 Identities = 86/134 (64%), Positives = 112/134 (83%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F VE++DPDGKKFDKV+RIEA S+  D+YM LDVN+E+YP+R G+K+ +A A TL+L+GT
Sbjct: 11  FVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGT 70

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY PG RK+LADKYEY+MHGKL+K  ++GSG ++K E+Y+S+GGLLM+L+G     
Sbjct: 71  PDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYV 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  191 bits (486), Expect = 2e-46
 Identities = 93/134 (69%), Positives = 109/134 (81%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV R+DPDGKKFDKV+RIEARSE+ D+YM LDVN ++YP+  GEK+AVA A TL+L+GT
Sbjct: 10  FTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVALAPTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PD GY+  G RKSLADKYEYVM+GKLY  +E+GSG NVK E+  SFGGLLMLL+G   N 
Sbjct: 70  PDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLMLLKGDPSNA 129

Query: 43  NKFSLDQRLFLLMR 2
             F LDQRLFLLMR
Sbjct: 130 GNFELDQRLFLLMR 143


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  189 bits (480), Expect = 8e-46
 Identities = 89/134 (66%), Positives = 110/134 (82%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV+RIEA S+  D++M LDVNTEIYP+  G+K+ +A A TL+L+GT
Sbjct: 11  FVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTLNLDGT 70

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY  G RK+LADKYEY+M+GKLYK +E+GSG  VK EM +S+GGLLMLLRG   + 
Sbjct: 71  PDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRGDPSHV 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera]
          Length = 305

 Score =  183 bits (465), Expect = 5e-44
 Identities = 95/156 (60%), Positives = 114/156 (73%), Gaps = 22/156 (14%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+  GEK+A++ A+TLDL+GT
Sbjct: 10  FKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGT 69

Query: 223 PDTGYYNP----GM------------------RKSLADKYEYVMHGKLYKFAEQGSGPNV 110
           PDTGYY      GM                  RKSLADK+EYVMHGKLYK +E+GSGPNV
Sbjct: 70  PDTGYYTQVKCCGMVVXLARTKRITAAVRVAGRKSLADKFEYVMHGKLYKISEEGSGPNV 129

Query: 109 KTEMYISFGGLLMLLRGGAENFNKFSLDQRLFLLMR 2
           K  +Y+SFGGLLM+L G   N  K  LDQR FLL+R
Sbjct: 130 KGVIYVSFGGLLMMLSGDPANTAKLDLDQRXFLLIR 165



 Score =  122 bits (305), Expect = 2e-25
 Identities = 59/106 (55%), Positives = 77/106 (72%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V+  DP GKKFDKV+RIEA SE+ D++MQLDVN E YPI+ GEK+ +  A TL L+G 
Sbjct: 198 FVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLHLDGA 257

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISF 86
             T Y+  G  KSLADK++YVM+G +YK + +GSGP+VK  + I F
Sbjct: 258 DVTDYFTQGEXKSLADKFDYVMYGIIYKVSNEGSGPDVKGYISILF 303


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  182 bits (463), Expect = 8e-44
 Identities = 88/135 (65%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+RPG+K+ +  A TL+L+GT
Sbjct: 10  FTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVLAPTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPN-VKTEMYISFGGLLMLLRGGAEN 47
           PD G+Y    RK+LADKY+YVMHGKLYK +E GSG    K E+Y SFGGLLM+L+G    
Sbjct: 70  PDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLLMMLKGDPST 129

Query: 46  FNKFSLDQRLFLLMR 2
              F LDQRLFLL+R
Sbjct: 130 AANFELDQRLFLLIR 144


>ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana]
           gi|297817262|ref|XP_002876514.1| hypothetical protein
           ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata]
           gi|565468254|ref|XP_006292007.1| hypothetical protein
           CARUB_v10018195mg [Capsella rubella]
           gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           8B; AltName: Full=RNA polymerase Rpb8
           gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis
           thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II
           subunit, putative [Arabidopsis thaliana]
           gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis
           thaliana] gi|30793811|gb|AAP40358.1| unknown protein
           [Arabidopsis thaliana] gi|297322352|gb|EFH52773.1|
           hypothetical protein ARALYDRAFT_907465 [Arabidopsis
           lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA
           polymerase Rpb8 [Arabidopsis thaliana]
           gi|482560714|gb|EOA24905.1| hypothetical protein
           CARUB_v10018195mg [Capsella rubella]
          Length = 146

 Score =  182 bits (463), Expect = 8e-44
 Identities = 84/134 (62%), Positives = 108/134 (80%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV R+EARS   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEY+MHGKLYK +E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum]
           gi|567183404|ref|XP_006402675.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
           gi|557103773|gb|ESQ44127.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
           gi|557103774|gb|ESQ44128.1| hypothetical protein
           EUTSA_v10006298mg [Eutrema salsugineum]
          Length = 146

 Score =  182 bits (462), Expect = 1e-43
 Identities = 85/134 (63%), Positives = 107/134 (79%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV R+EARS   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEYVMHGKLYK  E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYVMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
           gi|557098120|gb|ESQ38556.1| hypothetical protein
           EUTSA_v10029046mg [Eutrema salsugineum]
          Length = 146

 Score =  182 bits (461), Expect = 1e-43
 Identities = 84/134 (62%), Positives = 107/134 (79%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV R+EARS   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEY+MHGKLYK  E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYIMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  181 bits (460), Expect = 2e-43
 Identities = 87/134 (64%), Positives = 103/134 (76%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V RLDPDGKKFD+V+R+EARSE+  +YMQLDV T++YP++P EK+ +  A TL+L+GT
Sbjct: 10  FVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVLAPTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY    RK+LAD YEYVMHGKLYK +E  S  N K E+Y SFGGLLMLLRG     
Sbjct: 70  PDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTA 129

Query: 43  NKFSLDQRLFLLMR 2
             F LDQRLFLLMR
Sbjct: 130 ASFELDQRLFLLMR 143


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  181 bits (459), Expect = 2e-43
 Identities = 85/134 (63%), Positives = 111/134 (82%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV + DPDGKKFD+VNRIEARSE+ D++M LDVNTEIYP+R  +K+ +  A+TL+L+GT
Sbjct: 10  FTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVLASTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+  G +KSLADK+EYVMHGKLY+ +E+GSG +VK ++++SFGGLLM LRG     
Sbjct: 70  PDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIA 129

Query: 43  NKFSLDQRLFLLMR 2
            KF LDQ++FLL+R
Sbjct: 130 AKFELDQKIFLLIR 143


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  181 bits (458), Expect = 3e-43
 Identities = 84/134 (62%), Positives = 111/134 (82%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV + DPDGKKFD+VNRIEARSE+ D++M LD+NTEIYP+R  +K+ +  A+TL+L+GT
Sbjct: 10  FTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVLASTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+  G +KSLADK+EYVMHGKLY+ +E+GSG +VK ++++SFGGLLM LRG     
Sbjct: 70  PDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIA 129

Query: 43  NKFSLDQRLFLLMR 2
            KF LDQ++FLL+R
Sbjct: 130 AKFELDQKIFLLIR 143


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  181 bits (458), Expect = 3e-43
 Identities = 88/134 (65%), Positives = 102/134 (76%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V RLDPDGKKFDKV+R+EARSE+  +YMQLDV T++YP+R GEK+ +  A TL+L+GT
Sbjct: 10  FIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVLAPTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGYY    RK+LAD YEYVM GKLYK +E  S  N K E+Y SFGGLLMLLRG     
Sbjct: 70  PDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTA 129

Query: 43  NKFSLDQRLFLLMR 2
             F LDQRLFLLMR
Sbjct: 130 ASFELDQRLFLLMR 143


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  180 bits (456), Expect = 5e-43
 Identities = 86/136 (63%), Positives = 108/136 (79%), Gaps = 2/136 (1%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV RLDPDGKKFD+V+RIEAR+E+ ++YMQLDV T++YP+ PG+K+ +    TL+L+GT
Sbjct: 10  FTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVLVPTLNLDGT 69

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAE--QGSGPNVKTEMYISFGGLLMLLRGGAE 50
           PDTG++    RK+LADKYEYVMHGKLYK +E  + SG N K EMY SFGGLLM+L+G   
Sbjct: 70  PDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGLLMMLKGDPS 129

Query: 49  NFNKFSLDQRLFLLMR 2
           +   F LDQRLFLLMR
Sbjct: 130 SAANFELDQRLFLLMR 145


>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
           gi|482574468|gb|EOA38655.1| hypothetical protein
           CARUB_v10010575mg [Capsella rubella]
          Length = 146

 Score =  179 bits (455), Expect = 7e-43
 Identities = 83/134 (61%), Positives = 106/134 (79%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V +LDPDGKKFDKV R+EA S   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEY+MHGKLYK +E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata]
           gi|297337642|gb|EFH68059.1| ATRPABC16.5 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 146

 Score =  179 bits (455), Expect = 7e-43
 Identities = 82/134 (61%), Positives = 107/134 (79%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV R++A S   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVDKLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEY+MHGKLYK +E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8A [Arabidopsis
           thaliana] gi|75100070|sp|O81097.1|RPB8A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and V subunit 8A;
           AltName: Full=RNA polymerase I, II and III 16.5 kDa
           subunit; Short=AtRPABC16.5
           gi|4585968|gb|AAD25604.1|AC005287_6 RNA polymerase I, II
           and III 16.5 kDa subunit [Arabidopsis thaliana]
           gi|3372230|gb|AAC28252.1| RNA polymerase I, II and III
           16.5 kDa subunit [Arabidopsis thaliana]
           gi|21555812|gb|AAM63939.1| RNA polymerase II subunit,
           putative [Arabidopsis thaliana]
           gi|28466897|gb|AAO44057.1| At1g54250 [Arabidopsis
           thaliana] gi|110735704|dbj|BAE99832.1| RNA polymerase I,
           II and III 16.5 kDa subunit [Arabidopsis thaliana]
           gi|332194950|gb|AEE33071.1| RNA polymerase Rpb8
           [Arabidopsis thaliana]
          Length = 146

 Score =  179 bits (454), Expect = 9e-43
 Identities = 82/134 (61%), Positives = 107/134 (79%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           F V++LDPDGKKFDKV R++A S   +++M LDVNTE+YP+  G+K+ +A A TL+L+GT
Sbjct: 12  FVVDQLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPTLNLDGT 71

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAENF 44
           PDTGY+ PG +K+LADKYEY+MHGKLYK +E+  G   K E+Y+SFGGLLMLL+G   + 
Sbjct: 72  PDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGDPAHI 130

Query: 43  NKFSLDQRLFLLMR 2
           + F LDQRLFLLMR
Sbjct: 131 SHFELDQRLFLLMR 144


>ref|XP_004514482.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cicer arietinum]
          Length = 144

 Score =  177 bits (448), Expect = 4e-42
 Identities = 87/135 (64%), Positives = 111/135 (82%), Gaps = 1/135 (0%)
 Frame = -3

Query: 403 FTVERLDPDGKK-FDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEG 227
           F +E+L+PD KK F+KVNRIEARSE+ D++MQLD+N+E+YP++ G+K+ +  A TL+ +G
Sbjct: 10  FRIEKLNPDDKKLFEKVNRIEARSEKFDMFMQLDINSELYPLKAGQKFTLVLAPTLNPDG 69

Query: 226 TPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEMYISFGGLLMLLRGGAEN 47
           TPDTGYYNPG R+S+AD YEYVM+GKLY+  E GSG   K E+YISFGGLLMLLRG   +
Sbjct: 70  TPDTGYYNPGNRQSIADDYEYVMYGKLYRVTE-GSG-REKAELYISFGGLLMLLRGDHSH 127

Query: 46  FNKFSLDQRLFLLMR 2
            NKF LDQRL+LLMR
Sbjct: 128 CNKFELDQRLYLLMR 142


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  177 bits (448), Expect = 4e-42
 Identities = 85/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
 Frame = -3

Query: 403 FTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATTLDLEGT 224
           FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+R G+++ +  A TL+L+GT
Sbjct: 260 FTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGT 319

Query: 223 PDTGYYNPGMRKSLADKYEYVMHGKLYKFAE-QGSGPNVKTEMYISFGGLLMLLRGGAEN 47
           PDTG+Y    RK+LADK++YVMHGKLYK +E   SG   K E+Y SFGGLLM+L+G   +
Sbjct: 320 PDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSS 379

Query: 46  FNKFSLDQRLFLLMR 2
              F LDQRLFLL+R
Sbjct: 380 AASFELDQRLFLLIR 394