BLASTX nr result
ID: Paeonia23_contig00002067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00002067
(395 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 187 1e-45
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac... 182 5e-44
gb|ABK26380.1| unknown [Picea sitchensis] 181 7e-44
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 181 9e-44
emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera] 176 4e-42
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 175 7e-42
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 173 2e-41
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 173 3e-41
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 173 3e-41
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 169 3e-40
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 169 5e-40
ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2... 169 5e-40
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 169 5e-40
ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr... 168 6e-40
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 168 8e-40
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun... 167 1e-39
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 167 2e-39
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 167 2e-39
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 166 4e-39
ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrat... 166 4e-39
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 187 bits (475), Expect = 1e-45
Identities = 89/131 (67%), Positives = 107/131 (81%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M N D+F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+ GEK+A++
Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A+TLDL+GTPDTGYY RKSLADK+EYVMHGKLYK +E+GSGPNVK IY+SFGGLLM
Sbjct: 61 ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120
Query: 35 LLRGGAENFNK 3
+L G N K
Sbjct: 121 MLSGDPANTAK 131
>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
1 [Theobroma cacao]
Length = 145
Score = 182 bits (461), Expect = 5e-44
Identities = 84/128 (65%), Positives = 107/128 (83%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+F ED+F V++LDPDGKKFDKV RIEARS+ D++M LDVN+EIYP+ G+K+ +A A T
Sbjct: 5 IFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHT 64
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGYY PG RKSLADKYEYVMHGKLYK ++ GSG +K EIY+S+GGLLM+LR
Sbjct: 65 LNLDGTPDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLR 123
Query: 26 GGAENFNK 3
G A + ++
Sbjct: 124 GEASHVSQ 131
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 181 bits (460), Expect = 7e-44
Identities = 87/128 (67%), Positives = 103/128 (80%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M L ED+FTV R+DPDGKKFDKV+RIEARSE+ D+YM LDVN ++YP+ GEK+AVA
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A TL+L+GTPD GY+ G RKSLADKYEYVM+GKLY +E+GSG NVK EI SFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 35 LLRGGAEN 12
LL+G N
Sbjct: 121 LLKGDPSN 128
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 181 bits (459), Expect = 9e-44
Identities = 81/125 (64%), Positives = 108/125 (86%), Gaps = 1/125 (0%)
Frame = -1
Query: 395 MANLFL-EDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVA 219
M+N+ L ED+F VE++DPDGKKFDKV+RIEA S+ D+YM LDVN+E+YP+R G+K+ +A
Sbjct: 1 MSNIVLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMA 60
Query: 218 FATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLL 39
A TL+L+GTPDTGYY PG RK+LADKYEY+MHGKL+K ++GSG ++K EIY+S+GGLL
Sbjct: 61 LAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLL 120
Query: 38 MLLRG 24
M+L+G
Sbjct: 121 MMLKG 125
>emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera]
Length = 305
Score = 176 bits (445), Expect = 4e-42
Identities = 91/153 (59%), Positives = 109/153 (71%), Gaps = 22/153 (14%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M N D+F V ++DPDGKKFDKV+RIEA+SE+ D+YMQLDVNTEIYP+ GEK+A++
Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60
Query: 215 ATTLDLEGTPDTGYYNP----GM------------------RKSLADKYEYVMHGKLYKF 102
A+TLDL+GTPDTGYY GM RKSLADK+EYVMHGKLYK
Sbjct: 61 ASTLDLDGTPDTGYYTQVKCCGMVVXLARTKRITAAVRVAGRKSLADKFEYVMHGKLYKI 120
Query: 101 AEQGSGPNVKTEIYISFGGLLMLLRGGAENFNK 3
+E+GSGPNVK IY+SFGGLLM+L G N K
Sbjct: 121 SEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAK 153
Score = 131 bits (329), Expect = 1e-28
Identities = 63/115 (54%), Positives = 82/115 (71%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M F +D+F V+ DP GKKFDKV+RIEA SE+ D++MQLDVN E YPI+ GEK+ +
Sbjct: 189 MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 248
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISF 51
A TL L+G T Y+ G KSLADK++YVM+G +YK + +GSGP+VK I I F
Sbjct: 249 APTLHLDGADVTDYFTQGEXKSLADKFDYVMYGIIYKVSNEGSGPDVKGYISILF 303
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 175 bits (443), Expect = 7e-42
Identities = 82/125 (65%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
Frame = -1
Query: 395 MANLFL-EDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVA 219
M+N+ L ED+F V++LDPDGKKFDKV+RIEA S+ D++M LDVNTEIYP+ G+K+ +A
Sbjct: 1 MSNIVLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMA 60
Query: 218 FATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLL 39
A TL+L+GTPDTGYY G RK+LADKYEY+M+GKLYK +E+GSG VK E+ +S+GGLL
Sbjct: 61 LAHTLNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLL 120
Query: 38 MLLRG 24
MLLRG
Sbjct: 121 MLLRG 125
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 173 bits (439), Expect = 2e-41
Identities = 80/124 (64%), Positives = 103/124 (83%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M ED+FTV + DPDGKKFD+VNRIEARSE+ D++M LDVNTEIYP+R +K+ +
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A+TL+L+GTPDTGY+ G +KSLADK+EYVMHGKLY+ +E+GSG +VK +I++SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 35 LLRG 24
LRG
Sbjct: 121 QLRG 124
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 173 bits (438), Expect = 3e-41
Identities = 82/125 (65%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M ED+FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+RPG+K+ +
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPN-VKTEIYISFGGLL 39
A TL+L+GTPD G+Y RK+LADKY+YVMHGKLYK +E GSG K EIY SFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 38 MLLRG 24
M+L+G
Sbjct: 121 MMLKG 125
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 173 bits (438), Expect = 3e-41
Identities = 79/124 (63%), Positives = 103/124 (83%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M ED+FTV + DPDGKKFD+VNRIEARSE+ D++M LD+NTEIYP+R +K+ +
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A+TL+L+GTPDTGY+ G +KSLADK+EYVMHGKLY+ +E+GSG +VK +I++SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 35 LLRG 24
LRG
Sbjct: 121 QLRG 124
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 169 bits (429), Expect = 3e-40
Identities = 80/124 (64%), Positives = 96/124 (77%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M+ ED F V RLDPDGKKFD+V+R+EARSE+ +YMQLDV T++YP++P EK+ +
Sbjct: 1 MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A TL+L+GTPDTGYY RK+LAD YEYVMHGKLYK +E S N K EIY SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 35 LLRG 24
LLRG
Sbjct: 121 LLRG 124
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 169 bits (427), Expect = 5e-40
Identities = 81/134 (60%), Positives = 104/134 (77%), Gaps = 5/134 (3%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
MA ED+FTV RLDPDGKKFD+V+RIEAR+E+ ++YMQLDV T++YP+ PG+K+ +
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAE--QGSGPNVKTEIYISFGGL 42
TL+L+GTPDTG++ RK+LADKYEYVMHGKLYK +E + SG N K E+Y SFGGL
Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120
Query: 41 LMLLRG---GAENF 9
LM+L+G A NF
Sbjct: 121 LMMLKGDPSSAANF 134
>ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana]
gi|297817262|ref|XP_002876514.1| hypothetical protein
ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata]
gi|565468254|ref|XP_006292007.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
8B; AltName: Full=RNA polymerase Rpb8
gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis
thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II
subunit, putative [Arabidopsis thaliana]
gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis
thaliana] gi|30793811|gb|AAP40358.1| unknown protein
[Arabidopsis thaliana] gi|297322352|gb|EFH52773.1|
hypothetical protein ARALYDRAFT_907465 [Arabidopsis
lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA
polymerase Rpb8 [Arabidopsis thaliana]
gi|482560714|gb|EOA24905.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
Length = 146
Score = 169 bits (427), Expect = 5e-40
Identities = 75/121 (61%), Positives = 99/121 (81%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+ ED+F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A T
Sbjct: 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPT 65
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 26 G 24
G
Sbjct: 125 G 125
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 169 bits (427), Expect = 5e-40
Identities = 81/124 (65%), Positives = 95/124 (76%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M+ ED F V RLDPDGKKFDKV+R+EARSE+ +YMQLDV T++YP+R GEK+ +
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
A TL+L+GTPDTGYY RK+LAD YEYVM GKLYK +E S N K EIY SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 35 LLRG 24
LLRG
Sbjct: 121 LLRG 124
>ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum]
gi|567183404|ref|XP_006402675.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103773|gb|ESQ44127.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103774|gb|ESQ44128.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
Length = 146
Score = 168 bits (426), Expect = 6e-40
Identities = 76/121 (62%), Positives = 98/121 (80%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+ ED+F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A T
Sbjct: 6 ILFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGY+ PG +K+LADKYEYVMHGKLYK E+ G K E+Y+SFGGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYVMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 26 G 24
G
Sbjct: 125 G 125
>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
gi|557098120|gb|ESQ38556.1| hypothetical protein
EUTSA_v10029046mg [Eutrema salsugineum]
Length = 146
Score = 168 bits (425), Expect = 8e-40
Identities = 75/121 (61%), Positives = 98/121 (80%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+ ED+F V++LDPDGKKFDKV R+EARS +++M LDVNTE+YP+ G+K+ +A A T
Sbjct: 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPT 65
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGY+ PG +K+LADKYEY+MHGKLYK E+ G K E+Y+SFGGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 26 G 24
G
Sbjct: 125 G 125
>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
notabilis]
Length = 187
Score = 167 bits (423), Expect = 1e-39
Identities = 79/131 (60%), Positives = 102/131 (77%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
MA ED+F ++RL+PDGKKFDKV RIEA+SE+ D++M LDV T++YP+ GEK+++A
Sbjct: 1 MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLM 36
++TL+ +GTPDTGYY PG RK+LAD YEYVM GKLY+ AE GSG + K EI SFGGLLM
Sbjct: 61 SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAE-GSGHHGKAEIDASFGGLLM 119
Query: 35 LLRGGAENFNK 3
+L+G F K
Sbjct: 120 MLKGDPSYFKK 130
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 167 bits (422), Expect = 2e-39
Identities = 79/125 (63%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M ED+FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+R G+++ +
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAE-QGSGPNVKTEIYISFGGLL 39
A TL+L+GTPDTG+Y RK+LADK++YVMHGKLYK +E SG K EIY SFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370
Query: 38 MLLRG 24
M+L+G
Sbjct: 371 MMLKG 375
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 167 bits (422), Expect = 2e-39
Identities = 79/125 (63%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = -1
Query: 395 MANLFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAF 216
M ED+FTV RLDPDGKKFD+V+RIEARSE+ D+YMQLDV TE+YP+R G+++ +
Sbjct: 46 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105
Query: 215 ATTLDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAE-QGSGPNVKTEIYISFGGLL 39
A TL+L+GTPDTG+Y RK+LADK++YVMHGKLYK +E SG K EIY SFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165
Query: 38 MLLRG 24
M+L+G
Sbjct: 166 MMLKG 170
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 166 bits (419), Expect = 4e-39
Identities = 74/121 (61%), Positives = 97/121 (80%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+ ED+F V +LDPDGKKFDKV R+EA S +++M LDVNTE+YP+ G+K+ +A A T
Sbjct: 6 IMFEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLK 124
Query: 26 G 24
G
Sbjct: 125 G 125
>ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata]
gi|297337642|gb|EFH68059.1| ATRPABC16.5 [Arabidopsis
lyrata subsp. lyrata]
Length = 146
Score = 166 bits (419), Expect = 4e-39
Identities = 73/121 (60%), Positives = 98/121 (80%)
Frame = -1
Query: 386 LFLEDVFTVERLDPDGKKFDKVNRIEARSERNDLYMQLDVNTEIYPIRPGEKYAVAFATT 207
+ ED+F V++LDPDGKKFDKV R++A S +++M LDVNTE+YP+ G+K+ +A A T
Sbjct: 6 ILFEDIFVVDKLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPT 65
Query: 206 LDLEGTPDTGYYNPGMRKSLADKYEYVMHGKLYKFAEQGSGPNVKTEIYISFGGLLMLLR 27
L+L+GTPDTGY+ PG +K+LADKYEY+MHGKLYK +E+ G K E+Y+SFGGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLK 124
Query: 26 G 24
G
Sbjct: 125 G 125