BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00001737
         (2196 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              697   0.0  
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   697   0.0  
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   652   0.0  
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   647   0.0  
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   640   0.0  
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     617   e-174
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   612   e-172
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   610   e-172
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   595   e-167
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   584   e-164
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      573   e-160
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   567   e-159
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   565   e-158
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   563   e-157
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   561   e-157
gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...   560   e-156
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   555   e-155
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   545   e-152
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   542   e-151

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  697 bits (1800), Expect = 0.0
 Identities = 371/583 (63%), Positives = 411/583 (70%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKCPPDTF T                K+RE IYFRVQC L             
Sbjct: 1    MSCLLPQFKCPPDTFST--------HPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTA 52

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLDIEKLRLPSLE HSNSVAAHRPWTYIG  GPPTEANF A+LA  +   SE+AVI    
Sbjct: 53   VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAA 112

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAA +VG N +AK E+KPA F    D +QF+R Q  E ER+GI+G
Sbjct: 113  AEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG 172

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +G ETG+ + +S+ +  ++ DDLEPT+EEL+ ++ + S+S  VRS RQ          
Sbjct: 173  DSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARA 232

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   L EVDYSDP               ATEEL+LSEGIQD
Sbjct: 233  AEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 292

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         R G +PTF QWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVISI
Sbjct: 293  LLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISI 352

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMN+QDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 353  AKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 412

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHPNNEEVAEATGLSMKRL AVLLTPK PRSLDQK
Sbjct: 413  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQK 472

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
            IGINQNLKPSEVIADPDAET+E++LIKQFM++DLEKVL++LNPREKQVIRWRYGLEDGR 
Sbjct: 473  IGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRT 532

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIESCAF             QYLVS
Sbjct: 533  KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  697 bits (1800), Expect = 0.0
 Identities = 371/583 (63%), Positives = 411/583 (70%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKCPPDTF T                K+RE IYFRVQC L             
Sbjct: 1    MSCLLPQFKCPPDTFST-----HPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTA 55

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLDIEKLRLPSLE HSNSVAAHRPWTYIG  GPPTEANF A+LA  +   SE+AVI    
Sbjct: 56   VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAA 115

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAA +VG N +AK E+KPA F    D +QF+R Q  E ER+GI+G
Sbjct: 116  AEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG 175

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +G ETG+ + +S+ +  ++ DDLEPT+EEL+ ++ + S+S  VRS RQ          
Sbjct: 176  DSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARA 235

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   L EVDYSDP               ATEEL+LSEGIQD
Sbjct: 236  AEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 295

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         R G +PTF QWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVISI
Sbjct: 296  LLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISI 355

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMN+QDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 356  AKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 415

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHPNNEEVAEATGLSMKRL AVLLTPK PRSLDQK
Sbjct: 416  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQK 475

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
            IGINQNLKPSEVIADPDAET+E++LIKQFM++DLEKVL++LNPREKQVIRWRYGLEDGR 
Sbjct: 476  IGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRT 535

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIESCAF             QYLVS
Sbjct: 536  KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  652 bits (1682), Expect = 0.0
 Identities = 356/583 (61%), Positives = 396/583 (67%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKC PDTF   F              KS+EPI FR  C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLD+EKLRLPSLE HSN+VAA+R WTY GA GP TE N G SLAT +   S++AVI    
Sbjct: 84   VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAALMV  + +AK +SKPAI    +D N    AQL E ER  I+G
Sbjct: 143  AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAI-SLSADTNTSMWAQLTERERASIIG 201

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +  E    EE+S      +  DLEPT EELK ++ ++S+S AVRSRRQ+         
Sbjct: 202  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   + EVDYSDP               A EE+QLS GIQD
Sbjct: 262  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         RCGG PTF QWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVISI
Sbjct: 322  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 382  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHPNNEEVAEATGLSMKRL AVLLTPK PRSLDQK
Sbjct: 442  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 501

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
             GINQNLKPSEVIADP+AET+ED+LIK+FMK+DLEKVLDTLNPRE+QV+RWR+GLEDGRM
Sbjct: 502  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIES AF             QY ++
Sbjct: 562  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 604


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  647 bits (1668), Expect = 0.0
 Identities = 353/583 (60%), Positives = 395/583 (67%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKC PDTF   F              KS+EPI FR  C+L             
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLD+EKLRLPSLE HSN+VAA+R WTY GA GP TE N G SLAT +   S++AVI    
Sbjct: 84   VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAALMV  + +AK +SKPAI    +D +    AQL E ER  I+G
Sbjct: 143  AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAI-SLSADTSTSMWAQLTERERASIIG 201

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +  E    EE+S      +  DLEPT EELK ++ ++S+S AVRSRRQ+         
Sbjct: 202  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   + EVDYSDP               A EE+QLS GIQD
Sbjct: 262  AEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         RCGG PTF QWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVISI
Sbjct: 322  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 382  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHPNNEEVA+ATGLSMKRL AVLL PK PRSLDQK
Sbjct: 442  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQK 501

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
             GINQNLKPSEVIADP+AET+ED+LIK+FMK+DLEKVLDTLNPRE+QV+RWR+GLEDGRM
Sbjct: 502  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIES AF             QY ++
Sbjct: 562  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 604


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  640 bits (1650), Expect = 0.0
 Identities = 360/623 (57%), Positives = 406/623 (65%), Gaps = 39/623 (6%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPF---------------IKXXXXXXXXXXXX------------ 342
            MSCLLPQFKC PDTF   F               +K                        
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 343  ---KSREPIYFRVQCMLXXXXXXXXXXXXXVLDIEKLRLPSLEDHSNSVAAHRPWTYIGA 513
               K +E I FR QC+L             VLD+EKLRLPS E H NSVA  RPWTYIGA
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGA 120

Query: 514  TGPPTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKE 693
            TGPP+EA+ GA+LAT++   S++AVI                  KDAALM  +   AK E
Sbjct: 121  TGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTE 180

Query: 694  SKPAI-FPPESDINQFKRAQLAEAERVGIVGDYMGDETGLGEEHSIPNYFKEFDDLEPTV 870
             K  + F  +S  +++  A   EAER GI+GD   DE+ + E+ S  N   E D+LEPT 
Sbjct: 181  MKSGVSFATDSFTSKW--ALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTN 238

Query: 871  EELKFMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDY 1050
            EEL+ ++ +LS S AVRSRRQ+                                L +VDY
Sbjct: 239  EELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDY 298

Query: 1051 SDPXXXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAG 1230
            SDP               A EEL+LSEGIQD             RCGGQPTF QWAAAAG
Sbjct: 299  SDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAG 358

Query: 1231 VDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKF 1410
            VDQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKF
Sbjct: 359  VDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 418

Query: 1411 DASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPN 1590
            DASKGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRVKEARKQL++ENGRHP+
Sbjct: 419  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD 478

Query: 1591 NEEVAEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPS--------EVIADPDAETS 1746
            NEEVAEATGLSMKRLTAVLLTPK PRSLDQKIGINQNLKPS        EVIADP+AET+
Sbjct: 479  NEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETA 538

Query: 1747 EDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIE 1926
            EDMLIKQFM++DLEKVLD+L+ RE+QVIRWR+G+EDGRMKTLQEIGE+M VSRERIRQIE
Sbjct: 539  EDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIE 598

Query: 1927 SCAFXXXXXXXXXXXXHQYLVSF 1995
            SCAF             QYL+S+
Sbjct: 599  SCAFRKLKNKKRTKHLQQYLLSY 621


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  617 bits (1592), Expect = e-174
 Identities = 339/583 (58%), Positives = 385/583 (66%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQF C PDTF   F                   I    QC+L             
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSLAQCVLSTTSPSTSVGATY 60

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VL +EKLR PSL+ +S SV ++RPWTY GATGPP EANF A+LAT +   SE+AVI    
Sbjct: 61   VLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAAA 120

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAAL+V  +  A+  S  +     S+    K AQ A   R     
Sbjct: 121  AEAVTLAKAAVKVAKDAALLVRPSTRAESISLVS-----SEARNIKTAQAASRVR----- 170

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +  E  L E+H   +  KE +DL+PT EEL+ +Q +LS+S AVRSRRQS         
Sbjct: 171  DSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRA 230

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   + +VD+SDP               ATEE++LSEGIQD
Sbjct: 231  AEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQD 290

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         RCGG PTF QWAAAAGVDQKTLR+R+NYGILCKDKMIKSN+RLVISI
Sbjct: 291  LLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISI 350

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 351  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 410

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGR PN+EEVAEATGLSMKRL AVLLTPK PRSL+QK
Sbjct: 411  RLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQK 470

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
            IGINQNLKPSE+IADPDAET ED+L +QFMKQDL+KVLD+LN REKQVIRWR+G++DGRM
Sbjct: 471  IGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRM 530

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIESCAF             QYL+S
Sbjct: 531  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 573


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  612 bits (1579), Expect = e-172
 Identities = 332/523 (63%), Positives = 370/523 (70%)
 Frame = +1

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLD+EKLRLPSLE HSN+VAA+R WTY GA GP TE N G SLAT +   S++AVI    
Sbjct: 4    VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAALMV  + +AK +SKPAI    +D N    AQL E ER  I+G
Sbjct: 63   AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAI-SLSADTNTSMWAQLTERERASIIG 121

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +  E    EE+S      +  DLEPT EELK ++ ++S+S AVRSRRQ+         
Sbjct: 122  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   + EVDYSDP               A EE+QLS GIQD
Sbjct: 182  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         RCGG PTF QWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVISI
Sbjct: 242  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 302  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHPNNEEVAEATGLSMKRL AVLLTPK PRSLDQK
Sbjct: 362  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 421

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
             GINQNLKPSEVIADP+AET+ED+LIK+FMK+DLEKVLDTLNPRE+QV+RWR+GLEDGRM
Sbjct: 422  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIES AF             QY ++
Sbjct: 482  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 524


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  610 bits (1573), Expect = e-172
 Identities = 339/583 (58%), Positives = 390/583 (66%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKC PDTF   F              KSREPIY+R QC+L             
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTA--- 58

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLD+EKLRLPS E  S+S+A + PWTY         A FG++LAT +   S++AVI    
Sbjct: 59   VLDLEKLRLPSFEAPSDSIAPNSPWTY---------ATFGSTLATETLITSDEAVIAAAA 109

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVG 783
                          KDAAL+V +  +A+ ESK       S I+  +  Q  E ER  I+G
Sbjct: 110  AEAVALARAAVKVAKDAALLVKNFPSAETESK---LTSPSTIDASRWPQFTETERARIIG 166

Query: 784  DYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXX 963
            D +  ETG  EE S+ +  KE D LE T +EL+ +Q +LSE  AVRSRRQ+         
Sbjct: 167  DSVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARA 226

Query: 964  XXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQD 1143
                                   L EVDYSDP               A+EEL+LS  IQD
Sbjct: 227  VEKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQD 286

Query: 1144 XXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 1323
                         R GGQPTF QWAAAAGVDQ+TLRKR+N+G +CKDKMIKSNIRLVISI
Sbjct: 287  LLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISI 346

Query: 1324 AKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTI 1503
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRTI
Sbjct: 347  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 406

Query: 1504 RLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQK 1683
            RLPFHMVEATYRVKEARKQL++ENGRHP++EEVAEA GLSMKRL+AVLLTPK PRSLDQK
Sbjct: 407  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQK 466

Query: 1684 IGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRM 1863
            IG+N +LKPSEVIADP+AET+E++L+KQFMKQDLEKVL+TLNPRE QV+RWR+GLEDGRM
Sbjct: 467  IGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRM 526

Query: 1864 KTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            KTLQEIGE+M VSRERIRQIES AF             QYL++
Sbjct: 527  KTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  595 bits (1533), Expect = e-167
 Identities = 320/550 (58%), Positives = 373/550 (67%)
 Frame = +1

Query: 343  KSREPIYFRVQCMLXXXXXXXXXXXXXVLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGP 522
            K+R PI F  Q M              +LD+E+  LPSL  +S+S+  +RPWTY GA GP
Sbjct: 68   KARYPISFCAQYMSSSTSHSTSTPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGP 127

Query: 523  PTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKP 702
            PTEAN+GA+LAT +   SE+AVI                  KD AL+V +N+ AK E+  
Sbjct: 128  PTEANYGAALATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSS 187

Query: 703  AIFPPESDINQFKRAQLAEAERVGIVGDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELK 882
             +    S  +    AQ  E E    +GD M  ET L E+H +     E +++EP  EE +
Sbjct: 188  PVSCGTSAFH-INWAQHLETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFE 246

Query: 883  FMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPX 1062
             +Q +LS   A RS RQ+                                L +VD+SDP 
Sbjct: 247  LLQEQLSNGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPL 306

Query: 1063 XXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQK 1242
                          A EE++LSEGIQ+             RCG QPTF QWAAAAGVDQK
Sbjct: 307  RYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQK 366

Query: 1243 TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASK 1422
            TLRKR+NYGI+CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASK
Sbjct: 367  TLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 426

Query: 1423 GFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNEEV 1602
            GFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRV+EA+KQL++ NGRHPN+EEV
Sbjct: 427  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEV 486

Query: 1603 AEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMKQD 1782
            AEATGLSMKRL AVLLTPK PRSL+QKIGINQNLKPS+VIADPDAET+ED+L+K+FMKQD
Sbjct: 487  AEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQD 546

Query: 1783 LEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXX 1962
            LEKVLD+LNPREKQVIRWR+G+EDGRMKTLQEIGE+M VSRERIRQIESCAF        
Sbjct: 547  LEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKR 606

Query: 1963 XXXXHQYLVS 1992
                 QY++S
Sbjct: 607  TKHLQQYVLS 616


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  584 bits (1505), Expect = e-164
 Identities = 324/585 (55%), Positives = 380/585 (64%), Gaps = 2/585 (0%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKC PDTF   F                        QC+L             
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQLP----------QCVLSSASPSTA----- 45

Query: 424  VLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXX 603
            VLD+EKLRLPSLE HS+S++A+RPWTYIG  GP  +  FG SLA  +   +++AVI    
Sbjct: 46   VLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAA 105

Query: 604  XXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKR--AQLAEAERVGI 777
                          KDAA M  +    KKE+K    P  S  + F    + L E ER  I
Sbjct: 106  AEAVALARAAVKVAKDAAEMAKNYSFMKKETK---IPIASTTDSFSSMWSLLTEKERADI 162

Query: 778  VGDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXX 957
            +GD +  ET L EE+S+    +E+D LEPT EEL  +Q +LSE  AVRS+RQ+       
Sbjct: 163  IGDSVSAETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRA 222

Query: 958  XXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGI 1137
                                     L EVD SDP               ATEE++LSEGI
Sbjct: 223  RAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGI 282

Query: 1138 QDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 1317
            QD             R GG+P+F QWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVI
Sbjct: 283  QDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVI 342

Query: 1318 SIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSR 1497
            SIAKNYQG GMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS++SR
Sbjct: 343  SIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSR 402

Query: 1498 TIRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLD 1677
            TIRLPFHMV+ATYRVKEARKQL++ENGRHP+++EVAEA GLSMKRL+AVLLTPK PRSLD
Sbjct: 403  TIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLD 462

Query: 1678 QKIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDG 1857
            QK+G N +LK SEV ADP+AET+ED+L+K+FMK+DL KVL +L+PRE QV+RWR+G+EDG
Sbjct: 463  QKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDG 522

Query: 1858 RMKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            RMKTLQEIGE+M VSRER+RQIE  AF             QY+V+
Sbjct: 523  RMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  573 bits (1476), Expect = e-160
 Identities = 315/582 (54%), Positives = 371/582 (63%), Gaps = 1/582 (0%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTF-YTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXX 420
            M+CLLPQFKC PDTF  +  +             ++R+ + FR QC +            
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60

Query: 421  XVLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXX 600
             + D+EKLRLP +E +SNS++A    T++   G P E  F  +L       +E+AVI   
Sbjct: 61   SIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAAA 120

Query: 601  XXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIV 780
                           KDAALM  ++   K  SK      E     F  AQL E E+VG +
Sbjct: 121  AAEAVALARAAAKLAKDAALMAFNSQPTKPVSKL-----EGQSLHFSGAQLLENEQVGSM 175

Query: 781  GDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXX 960
             ++ G E  L E  ++     E  D+EPT+EEL+ ++V+L ES  VRS RQ         
Sbjct: 176  RNFEGSENSLREGDTV----SEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRAR 231

Query: 961  XXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQ 1140
                                    + EVDYSDP               ++EE +LS GIQ
Sbjct: 232  AAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQ 291

Query: 1141 DXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 1320
            D             R G  P+FVQWAAAAG+DQ+TLR+RLN+G  CKDKMIKSN+RLVIS
Sbjct: 292  DLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVIS 351

Query: 1321 IAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRT 1500
            IAKNYQG+GMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLS+QSRT
Sbjct: 352  IAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 411

Query: 1501 IRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQ 1680
            IRLPFHMVEATYRVKEARKQL +ENG+ PNNEEVAEATGLSMKRLTAVL+TPK PRSLDQ
Sbjct: 412  IRLPFHMVEATYRVKEARKQLLSENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQ 471

Query: 1681 KIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGR 1860
            KIG N NLKPSEVIADP+AET+ED+L KQFM+QDLEKVLDTL+ REKQVIRWR+GLEDGR
Sbjct: 472  KIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGR 531

Query: 1861 MKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYL 1986
            MKTLQEIGE+M VSRERIRQIES AF             QY+
Sbjct: 532  MKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYM 573


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  572 bits (1474), Expect = e-160
 Identities = 320/590 (54%), Positives = 379/590 (64%), Gaps = 7/590 (1%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXX-------KSREPIYFRVQCMLXXXXXX 402
            MSCLLPQFKC P+TF   F                     K R+P   R QC+L      
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPP 60

Query: 403  XXXXXXXVLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSED 582
                    LD+++L+LP  + +++SV+  R  +Y+GA     E++  ++L T     SE+
Sbjct: 61   TSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAV----ESSLASTLLT-----SEE 111

Query: 583  AVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEA 762
            A I                  +DAAL+  +N  + +    +   P+ D   FK AQ  E+
Sbjct: 112  ASIAAAAAEAVTLAKAAVKVARDAALLA-NNINSSRAGTKSQSSPKPDALHFKWAQFMES 170

Query: 763  ERVGIVGDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXX 942
            ER  I+G+ +G      E  ++     E DD+EPT EEL+ +Q +LSES  V+S+RQ+  
Sbjct: 171  ERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTER 230

Query: 943  XXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQ 1122
                                          + EVDYSDP               ATEEL+
Sbjct: 231  KARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELE 290

Query: 1123 LSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSN 1302
            LSEGIQD             R G +PTF QWAAAAGV+Q+TLRKRLNYG LCKDKMIKSN
Sbjct: 291  LSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSN 350

Query: 1303 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSL 1482
            IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRK L
Sbjct: 351  IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFL 410

Query: 1483 SEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKP 1662
            S+QSRTIRLPFHMVEATYRVKEARKQL  ENGRHP+++E+AEA GLSMKRL AVL+TPK 
Sbjct: 411  SDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKA 470

Query: 1663 PRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRY 1842
            PRSL+QKIGINQNLKPSEVI+DP+AET EDMLIKQFMKQDLEKVLD+LNPREKQVIRWR+
Sbjct: 471  PRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRF 530

Query: 1843 GLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            G+EDGRMKTLQEIGE+M VSRERIRQIESCAF             QY++S
Sbjct: 531  GMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  567 bits (1461), Expect = e-159
 Identities = 310/552 (56%), Positives = 367/552 (66%), Gaps = 2/552 (0%)
 Frame = +1

Query: 343  KSREPIYFRVQCMLXXXXXXXXXXXXXVLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGP 522
            ++RE   F+ QC+              V+D++K+R+PSL  HS SV+ H P TY+G  G 
Sbjct: 27   RTREATCFQTQCV--------SSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGS 78

Query: 523  PTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKP 702
              + +F A+L T S   SE+A+I                  KDAALMVGS     +  K 
Sbjct: 79   QKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGS-VPPSRSDKV 137

Query: 703  AIFPPESDINQFKRAQLAEAERVGIVGDYMGDETGLGEEHSIPNYFK--EFDDLEPTVEE 876
              FP E+DI + +RA+L E ER+G +        G  ++H   N     E  D +     
Sbjct: 138  DDFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENI 197

Query: 877  LKFMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSD 1056
            L+ +Q++ S+  AVRSRRQ+                                L E+DYSD
Sbjct: 198  LEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSD 257

Query: 1057 PXXXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVD 1236
            P               ATEEL+LSEGIQD             R GG+PTFVQWAAAAG+D
Sbjct: 258  PLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGID 317

Query: 1237 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDA 1416
            QK LR+RL+YG  CKDKMIKSNIRLVISIAKNYQG G+++QDLVQEGCRGLVRG EKFDA
Sbjct: 318  QKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDA 377

Query: 1417 SKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNE 1596
            SKGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMV+ATYRV+EA KQL++ENGRHPN+E
Sbjct: 378  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDE 437

Query: 1597 EVAEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMK 1776
            EVAEATGLSMKRLT VLLTPK PRSLDQKIGINQNLKPSEVI+DP+AET+ED+L+KQFMK
Sbjct: 438  EVAEATGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMK 497

Query: 1777 QDLEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXX 1956
            QDLEKVL+TLNPREKQV+RWR+GLEDGRMKTLQEIGE+M VSRERIRQIES AF      
Sbjct: 498  QDLEKVLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNK 557

Query: 1957 XXXXXXHQYLVS 1992
                   QYL+S
Sbjct: 558  KRTKNLRQYLLS 569


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  565 bits (1455), Expect = e-158
 Identities = 324/618 (52%), Positives = 369/618 (59%), Gaps = 37/618 (5%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MS LLPQF   PD F    I             KSR+ I+ R QC+L             
Sbjct: 1    MSYLLPQFLSLPDAFV---ICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATST 57

Query: 424  VLDIEKLRLPSLEDHSNSVAAHR----------------------------------PWT 501
            VL IEKL+LPS+E  SNSVAA R                                  PWT
Sbjct: 58   VLGIEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWT 117

Query: 502  YIGATGPPTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYT 681
            Y GA GPP EAN            SE+A++                  +DA ++VG N  
Sbjct: 118  YTGAVGPPAEAN----TKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNL 173

Query: 682  AKKESKPAIFPPESDINQFKRAQLA---EAERVGIVGDYMGDETGLGEEHSIPNYFKEFD 852
               ++       E+    F+   LA   E   VG+  +  G E          +   + D
Sbjct: 174  KDSDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSD 233

Query: 853  DLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXX 1032
            DLEP+ EEL+ +Q +LS   AV+S RQ+                                
Sbjct: 234  DLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRAS 293

Query: 1033 LHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQ 1212
            + +VDYSDP               A+EE +LS GIQD             RCGGQPTF Q
Sbjct: 294  VQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQ 353

Query: 1213 WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 1392
            WAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV
Sbjct: 354  WAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLV 413

Query: 1393 RGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTE 1572
            RG EKFDA+KGFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRVKEARKQL TE
Sbjct: 414  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTE 473

Query: 1573 NGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSED 1752
            NGRHPN+ EVAEATGLSMKRL AV+LTPK PRSLDQK+G N++LKPSEV+ADPDAETSE+
Sbjct: 474  NGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEE 533

Query: 1753 MLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESC 1932
            +L KQFM+QDLEKVLDTLNPREKQV+RWR+GLEDGRMKTLQEIGE+M VSRERIRQIESC
Sbjct: 534  ILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESC 593

Query: 1933 AFXXXXXXXXXXXXHQYL 1986
            AF             QY+
Sbjct: 594  AFRKLKNKKRTKFLQQYI 611


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  563 bits (1450), Expect = e-157
 Identities = 314/552 (56%), Positives = 364/552 (65%), Gaps = 2/552 (0%)
 Frame = +1

Query: 343  KSREPIYFRVQCMLXXXXXXXXXXXXXVLDIEKLRLPSLEDHSNSVAAHRPWTYIGATGP 522
            K+ EP  FR QC L             VL++EKLRLPSLE HS+S+AA+RPWTYIG  GP
Sbjct: 10   KNGEPFCFRAQCALSSASPSTSTA---VLNLEKLRLPSLESHSDSIAANRPWTYIGGIGP 66

Query: 523  PTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKP 702
            P E  FG SLAT +   +++AVI                  KDAA M  +  +   E+K 
Sbjct: 67   PKEPLFGTSLATETLIINDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETK- 125

Query: 703  AIFPPESDINQFKR--AQLAEAERVGIVGDYMGDETGLGEEHSIPNYFKEFDDLEPTVEE 876
               P  S  + F      L   ER  I+G     ETGL EE S     +E D   PT EE
Sbjct: 126  --IPIASTADSFSSMWCLLTGKERADIIGVSFSAETGLREECSTQYPTEESDCFGPTHEE 183

Query: 877  LKFMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSD 1056
            L  ++ +LSES  VRS+RQ+                                + EVD SD
Sbjct: 184  LALLEKQLSESIVVRSKRQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSD 243

Query: 1057 PXXXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVD 1236
            P               ATEE++LSEGIQD             R GG+PTF QWAAAA VD
Sbjct: 244  PLRFFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVD 303

Query: 1237 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDA 1416
            Q TLRKRLNY ILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA
Sbjct: 304  QITLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDA 363

Query: 1417 SKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNE 1596
            SKGFKFSTYAHWWI+QAVR+SLS+QSRTIRLPFHMV+ATYRVKEARKQ ++ENGRHP+++
Sbjct: 364  SKGFKFSTYAHWWIRQAVRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDK 423

Query: 1597 EVAEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMK 1776
            EVAEATGLSMKRL+AVLLTPK PRSLDQK+G N +LK SEV ADP+AET+ED+L+K+FMK
Sbjct: 424  EVAEATGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMK 483

Query: 1777 QDLEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXX 1956
            +DLE+VL++L+PRE QVIRWR+G+EDGRMKTLQEIGE+M VSRERIRQIE  AF      
Sbjct: 484  KDLERVLESLSPRENQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNK 543

Query: 1957 XXXXXXHQYLVS 1992
                   QYLVS
Sbjct: 544  NRTKQLRQYLVS 555


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  561 bits (1447), Expect = e-157
 Identities = 323/618 (52%), Positives = 368/618 (59%), Gaps = 37/618 (5%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MS LLPQF   PD F    I             KSR+ I+ R QC+L             
Sbjct: 1    MSYLLPQFLSLPDAFV---ICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATST 57

Query: 424  VLDIEKLRLPSLEDHSNSVAAHR----------------------------------PWT 501
            VL IEKL+LPS+E  SNSVAA R                                  PWT
Sbjct: 58   VLGIEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWT 117

Query: 502  YIGATGPPTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYT 681
            Y GA GPP EAN        +   SE+A++                  +DA ++VG N  
Sbjct: 118  YTGAVGPPAEAN----TKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNL 173

Query: 682  AKKESKPAIFPPESDINQFKRAQLA---EAERVGIVGDYMGDETGLGEEHSIPNYFKEFD 852
               ++       E+    F+   LA   E  RVG+  +  G E              + D
Sbjct: 174  NDSDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSD 233

Query: 853  DLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXX 1032
            DLEP+ EEL+ +Q +LS   AV+S RQ+                                
Sbjct: 234  DLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRAS 293

Query: 1033 LHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQ 1212
            + +VDYSDP               A+EE +LS GIQD             RCGGQPTF Q
Sbjct: 294  VQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQ 353

Query: 1213 WAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 1392
            WAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV
Sbjct: 354  WAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLV 413

Query: 1393 RGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTE 1572
            RG EKFDA+KGFKFSTYAHWWIKQAVRKSLS+QSR IRLPFHMVEATYRVKEARKQL TE
Sbjct: 414  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTE 473

Query: 1573 NGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSED 1752
            NGRHPN+ EVAEA GLSMKRL AV+LTPK PRSLDQKIG N++LKPSEV+ADP+AETSE+
Sbjct: 474  NGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEE 533

Query: 1753 MLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESC 1932
            +L KQFM+QDLEKVLDTLNPREKQV+RWR+GLEDGRMKTLQEIGE+M VSRERIRQIESC
Sbjct: 534  ILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESC 593

Query: 1933 AFXXXXXXXXXXXXHQYL 1986
            AF             QY+
Sbjct: 594  AFRKLKNKKRTKFLQQYI 611


>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score =  560 bits (1443), Expect = e-156
 Identities = 323/609 (53%), Positives = 382/609 (62%), Gaps = 27/609 (4%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLPQFKC PDTF   F              KSRE I FR QC+L             
Sbjct: 1    MSCLLPQFKCSPDTFAVNF---KSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATT 57

Query: 424  -VLDIEKLRLPSLEDHSNSVAAHRPWT--------------------------YIGATGP 522
             +L+ EKL+L  LE   NS+ A R WT                          Y+G+ GP
Sbjct: 58   TLLEFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSLPVASNKTLTYVGSVGP 117

Query: 523  PTEANFGASLATNSFFPSEDAVIXXXXXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKP 702
            P+E N GA+L   +   S++AVI                  KDAA+MV  + + K ++K 
Sbjct: 118  PSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKPDTKS 177

Query: 703  AIFPPESDINQFKRAQLAEAERVGIVGDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELK 882
             +   E D +  +R  + EAE    +G    D+  LGE           D  EP+ EEL+
Sbjct: 178  FL---EVDTSA-ERVVVREAE----IGSGENDDHVLGESD---------DSEEPSAEELE 220

Query: 883  FMQVKLSESTAVRSRRQSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPX 1062
             + ++LS S AVRS+RQ                                 + EVDYSDP 
Sbjct: 221  LLDLQLSSSIAVRSKRQIERKVRRGRAAEKAA-ANVVSVKSGSSKKKRSPVQEVDYSDPL 279

Query: 1063 XXXXXXXXXXXXXXATEELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQK 1242
                          A+EE  LSEGIQ              R GG+P++ QWAAAAGVDQK
Sbjct: 280  RYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQK 339

Query: 1243 TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASK 1422
            TLR+++NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+K
Sbjct: 340  TLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATK 399

Query: 1423 GFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNEEV 1602
            GFKFSTYAHWWIKQAVRKSLS+QSRTIRLPFHMVEATYRVKEARKQL++ENGR PN+EEV
Sbjct: 400  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEV 459

Query: 1603 AEATGLSMKRLTAVLLTPKPPRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMKQD 1782
            AEATGLSMKRL+AV+LTPKPPRSLDQKIG+NQ+LKPSEVI+DP+AETSE++LIKQFMKQD
Sbjct: 460  AEATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQD 519

Query: 1783 LEKVLDTLNPREKQVIRWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXX 1962
            L  VLD+LNPREKQV++WR+G+EDGRMKTLQEIGE+M VSRER+RQIESCAF        
Sbjct: 520  LADVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKKR 579

Query: 1963 XXXXHQYLV 1989
                 QY++
Sbjct: 580  TKQLQQYVM 588


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  555 bits (1430), Expect = e-155
 Identities = 312/584 (53%), Positives = 369/584 (63%), Gaps = 2/584 (0%)
 Frame = +1

Query: 247  SCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXXV 426
            SCLLPQFKC PD+F   F              +++ P++F+ QC +              
Sbjct: 3    SCLLPQFKCQPDSFSIHF------RTSFSVSKQNKGPVFFQPQCAVTTSPALLTS----T 52

Query: 427  LDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXXX 606
            LD+ KLRLPS +  S+S  + R WTY G  GP TEA +  +LA+ +   S++AV+     
Sbjct: 53   LDVAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAA 112

Query: 607  XXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVGD 786
                         KDA L   SN T    S  A         + K  Q  E ER GI+G 
Sbjct: 113  EAVALARAAVKVAKDATLFKNSNNTNLLISSTAD-------KRSKWDQFTEKERAGILGH 165

Query: 787  YMGDETGL-GEEHSIPNYFKEFD-DLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXX 960
                +TG+  ++ + P   KE   DL   ++E++ ++ + + S AVRS RQ+        
Sbjct: 166  LAVSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRSTRQTERKARRAK 225

Query: 961  XXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQ 1140
                                      EVD++DP                 EE +LS GIQ
Sbjct: 226  GLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQ 285

Query: 1141 DXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 1320
            D             RCG QPTF QWA+AAGVDQK+LRKR+NYG  CKDKMIKSNIRLVIS
Sbjct: 286  DLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVIS 345

Query: 1321 IAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRT 1500
            IAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLS+QSR 
Sbjct: 346  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRM 405

Query: 1501 IRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQ 1680
            IRLPFHMVEATYRVKEARKQL+TE GRHP NEEVAEATGLSMKRL AVLL+PKPPRSLDQ
Sbjct: 406  IRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQ 465

Query: 1681 KIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGR 1860
            KIG+NQNLKPSEVIADP+AETSED+LIKQFM++DL+KVLD+L  REKQVIRWR+G+EDGR
Sbjct: 466  KIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGR 525

Query: 1861 MKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            MKTLQEIGE+M VSRER+RQIES AF             QYLV+
Sbjct: 526  MKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 569


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  545 bits (1403), Expect = e-152
 Identities = 311/594 (52%), Positives = 368/594 (61%), Gaps = 12/594 (2%)
 Frame = +1

Query: 247  SCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXXV 426
            SCLLPQFKC PD+F   F               ++  ++F+ QC +             +
Sbjct: 3    SCLLPQFKCQPDSFSIHF------KTSYSLSKHNKGSVFFQPQCAVSTSPPLLTS----M 52

Query: 427  LDIEKLRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXXXX 606
            LD+ KLRLPS +  S+S  + R WTY G  GP TEA +  +LA+ +   S++AV+     
Sbjct: 53   LDVAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAA 112

Query: 607  XXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIVGD 786
                         KDA     S  T    S  A         + K  Q  E ER GI+G 
Sbjct: 113  EAVALARAAVKVAKDATSFRNSYNTKVVVSSAAD-------KRSKWDQFTEKERAGILGH 165

Query: 787  YMGDETGLGEEHSI-----------PNYFKEFD-DLEPTVEELKFMQVKLSESTAVRSRR 930
                +TG+  + S            P+   E   DL+   +E++ ++ +LS S+AVRS R
Sbjct: 166  LAVSDTGVVSDKSTAPAPAPAPAPAPDCNNESSGDLKSEKQEVELLEEQLSVSSAVRSTR 225

Query: 931  QSXXXXXXXXXXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXAT 1110
            Q+                                  EVD++DP               A 
Sbjct: 226  QTERKARRAKGLEKTASSMQSVKTGSSSRKKRAPSQEVDHNDPLRYLRMTTSSSKLLTAR 285

Query: 1111 EELQLSEGIQDXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKM 1290
            EE +LSEGIQD             RCG QPTF QWA+AAGVDQK+LRKR+NYG  CKD+M
Sbjct: 286  EEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQKSLRKRINYGTQCKDRM 345

Query: 1291 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAV 1470
            IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAV
Sbjct: 346  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAV 405

Query: 1471 RKSLSEQSRTIRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLL 1650
            RKSLS+QSR IRLPFHMVEATYRVKEARKQL++E G+ P NEEVAEATGLSMKRL AVLL
Sbjct: 406  RKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLSMKRLMAVLL 465

Query: 1651 TPKPPRSLDQKIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVI 1830
            +PKPPRSLDQKIGINQNLKPSEVIADP+AETSED+LIKQFM+QDL+KVLD+L+ REKQVI
Sbjct: 466  SPKPPRSLDQKIGINQNLKPSEVIADPEAETSEDILIKQFMRQDLDKVLDSLSTREKQVI 525

Query: 1831 RWRYGLEDGRMKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
            RWR+G+EDGRMKTLQEIGE M VSRER+RQIES AF             QYLV+
Sbjct: 526  RWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 579


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  542 bits (1396), Expect = e-151
 Identities = 311/584 (53%), Positives = 368/584 (63%), Gaps = 1/584 (0%)
 Frame = +1

Query: 244  MSCLLPQFKCPPDTFYTPFIKXXXXXXXXXXXXKSREPIYFRVQCMLXXXXXXXXXXXXX 423
            MSCLLP F C  DTF T                K+R  + F+ QC+L             
Sbjct: 1    MSCLLPHFNCHLDTFRT------HPYALPTHLSKTRPNLCFQPQCVLSATSPST------ 48

Query: 424  VLDIEK-LRLPSLEDHSNSVAAHRPWTYIGATGPPTEANFGASLATNSFFPSEDAVIXXX 600
            +L +EK L L +  D + S      W YI A  PP +ANF ++L+  S   +E+AVI   
Sbjct: 49   LLSLEKKLALDAPSDPNTS------WPYIAAVSPPLQANFKSTLSAESLLTNEEAVIVAA 102

Query: 601  XXXXXXXXXXXXXXXKDAALMVGSNYTAKKESKPAIFPPESDINQFKRAQLAEAERVGIV 780
                           KDAAL+V     A+ E K  +     D+      Q+ E E  G+ 
Sbjct: 103  ASEALALAKAAAKVAKDAALLVKKKPPAEAEYKSHVSSKSDDLLLKWFKQMEEVED-GVA 161

Query: 781  GDYMGDETGLGEEHSIPNYFKEFDDLEPTVEELKFMQVKLSESTAVRSRRQSXXXXXXXX 960
             + MG    + E   + +  +E  DLEP+ EEL+ +Q +LS+S AVRSRRQ+        
Sbjct: 162  EESMGAGAEIMEGVDV-SPSEEESDLEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVR 220

Query: 961  XXXXXXFXXXXXXXXXXXXXXXXXLHEVDYSDPXXXXXXXXXXXXXXXATEELQLSEGIQ 1140
                                    + EVDYSDP                TEE++LS GIQ
Sbjct: 221  ATEKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQ 280

Query: 1141 DXXXXXXXXXXXXXRCGGQPTFVQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 1320
            D             R G QPTF QWAA AGVDQKTLRKRLNYGI CKDKMIKSNIRLVIS
Sbjct: 281  DLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVIS 340

Query: 1321 IAKNYQGAGMNLQDLVQEGCRGLVRGTEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRT 1500
            IAKNYQG+GMNLQDLVQEGCRGLV+G EKFD +KGFKFSTYAHWWIKQAVRKSLS+QSRT
Sbjct: 341  IAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRT 400

Query: 1501 IRLPFHMVEATYRVKEARKQLFTENGRHPNNEEVAEATGLSMKRLTAVLLTPKPPRSLDQ 1680
            IRLPFHMVEATYRVKEARKQL++ENGR P++EEVAEATGLSMKRL AVL+TPK PRSL+Q
Sbjct: 401  IRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQ 460

Query: 1681 KIGINQNLKPSEVIADPDAETSEDMLIKQFMKQDLEKVLDTLNPREKQVIRWRYGLEDGR 1860
            KIGINQNLKPSEVI+DPDAET+E+ L+KQFMK+DLE+ LD+LNPRE+QV+RWR+G++DGR
Sbjct: 461  KIGINQNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGR 520

Query: 1861 MKTLQEIGEMMSVSRERIRQIESCAFXXXXXXXXXXXXHQYLVS 1992
             KTLQEIGEM+ VSRERIRQIES AF             QYLVS
Sbjct: 521  TKTLQEIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLVS 564