BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00001473
         (539 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   252   4e-65
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob...   245   6e-63
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an...   244   7e-63
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an...   242   5e-62
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   238   5e-61
gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus...   237   2e-60
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an...   232   5e-59
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr...   232   5e-59
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise...   230   2e-58
ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I an...   228   5e-58
ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I an...   227   1e-57
ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [A...   226   3e-57
ref|XP_006283792.1| hypothetical protein CARUB_v10004883mg [Caps...   224   1e-56
ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [S...   224   1e-56
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma...   224   1e-56
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [...   223   2e-56
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP...   222   4e-56
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ...   221   7e-56
ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I an...   221   9e-56
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   221   1e-55

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
           [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
           protein product [Vitis vinifera]
          Length = 372

 Score =  252 bits (644), Expect = 4e-65
 Identities = 120/156 (76%), Positives = 140/156 (89%)
 Frame = -2

Query: 469 SMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNF 290
           ++D+PDVPKG+LP H+ELQRTRV+C  DAPTHT N++YSGAY SMGV+N +RMDQF  NF
Sbjct: 6   ALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNF 65

Query: 289 CVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHR 110
            V+V RL+EDD+EFDMIGID +IANAFRRILIAE+PTMAIEKV IANNTS+VQDEVL+HR
Sbjct: 66  RVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHR 125

Query: 109 LGLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           LGL+PI ADPRLFD +SE+DTP EKNTIVF LHVRC
Sbjct: 126 LGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRC 161


>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
           gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
           isoform 1 [Theobroma cacao]
          Length = 383

 Score =  245 bits (625), Expect = 6e-63
 Identities = 119/154 (77%), Positives = 134/154 (87%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP G+LP HLELQRTRV+C  DAP HT ++ YSGAY SMGV+N +R+D F  NF V
Sbjct: 19  DLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDHFCHNFRV 78

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           +V RLTE+D+EFDMIGIDAAIANAFRRILIAE+PTMAIEKV IANNTSVVQDEVL+HRLG
Sbjct: 79  EVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQDEVLAHRLG 138

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI  DPRLF+YMSE+D P EKNTIVFKLHV C
Sbjct: 139 LIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHC 172


>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Solanum lycopersicum]
          Length = 393

 Score =  244 bits (624), Expect = 7e-63
 Identities = 114/154 (74%), Positives = 136/154 (88%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPD+PKGKLP H+ELQRTRV+C S APT+T N+ YSGAY +MGV+N +R +QF  NF V
Sbjct: 29  DLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRDNFKV 88

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           ++ RL ED++EFDMIGID ++ANAFRRILIAE+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 89  EIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAHRLG 148

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PIK DPRLF+YMSE+D P EKNTIVFKLHVRC
Sbjct: 149 LIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRC 182


>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Solanum tuberosum]
          Length = 393

 Score =  242 bits (617), Expect = 5e-62
 Identities = 112/154 (72%), Positives = 135/154 (87%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPD+PKGKLP H+ELQRTRV+C S APT+T N+ YSGAY +MGV+N +R +QF  NF V
Sbjct: 29  DLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRNNFKV 88

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           ++ RL ED++EFDMIGID ++ANAFRRILIAE+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 89  EIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAHRLG 148

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI+ DPRLF+YMSE+D P EKNTIVFKLH RC
Sbjct: 149 LIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARC 182


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
           communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
           polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  238 bits (608), Expect = 5e-61
 Identities = 114/154 (74%), Positives = 135/154 (87%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP G+LP HL+LQRTRV+C SDAP HT NI YSGAY S+GV+N +++D F  NF V
Sbjct: 18  DLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFRDNFKV 77

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           +V +LT+DD+EFDMIGIDAAIANAFRRILI+E+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 78  EVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVLAHRLG 137

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI ADPRLF+Y+S +DTP EKNTIVFKLH  C
Sbjct: 138 LIPINADPRLFEYLSANDTPNEKNTIVFKLHASC 171


>gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus guttatus]
          Length = 381

 Score =  237 bits (604), Expect = 2e-60
 Identities = 111/154 (72%), Positives = 133/154 (86%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP G LP HLELQRTR +C +DAP HT NI+YSGAY SMGV+N +R ++F KNF V
Sbjct: 17  DLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSMRFEKFCKNFRV 76

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           +V RL +D++EFDM+GIDA++ANAFRRILI+E+PTMAIE V +ANNTSVVQDEVL+HRLG
Sbjct: 77  EVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSVVQDEVLAHRLG 136

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+P+K DPRLF+Y SE+D P EKNTIVFKLH RC
Sbjct: 137 LIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRC 170


>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Citrus sinensis]
          Length = 382

 Score =  232 bits (591), Expect = 5e-59
 Identities = 115/154 (74%), Positives = 132/154 (85%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP+ KLP H+E QRTRV C  DAP HT N+ YSGAY SMGV+N +++D F  NF V
Sbjct: 20  DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 78

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           +V RLT+DD+EFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+QDEVL+HRLG
Sbjct: 79  EVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAHRLG 138

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI  DPRLF+YMSE+DT  EKNTIVFKLHV C
Sbjct: 139 LIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLC 172


>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
           gi|557555856|gb|ESR65870.1| hypothetical protein
           CICLE_v10008413mg [Citrus clementina]
          Length = 421

 Score =  232 bits (591), Expect = 5e-59
 Identities = 115/154 (74%), Positives = 132/154 (85%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP+ KLP H+E QRTRV C  DAP HT N+ YSGAY SMGV+N +++D F  NF V
Sbjct: 59  DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 117

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           +V RLT+DD+EFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+QDEVL+HRLG
Sbjct: 118 EVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAHRLG 177

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI  DPRLF+YMSE+DT  EKNTIVFKLHV C
Sbjct: 178 LIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLC 211


>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
          Length = 364

 Score =  230 bits (586), Expect = 2e-58
 Identities = 110/154 (71%), Positives = 129/154 (83%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP G+LP HL+LQRTRV+C S+APT+T NI+YSGAY  MGV+N +  D F +NF V
Sbjct: 3   DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           ++  + E DIEFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+ DEVLSHRLG
Sbjct: 63  EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+P+K DPR F +MSE D P EKNT+VFKLHV C
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSC 156


>ref|XP_004968297.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Setaria italica]
          Length = 372

 Score =  228 bits (582), Expect = 5e-58
 Identities = 103/154 (66%), Positives = 132/154 (85%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           D+PD  + KLPDHLELQRTRV+C +DAP HT   +YSG Y + GV+N + +++F KNF +
Sbjct: 14  DVPDQQENKLPDHLELQRTRVVCNADAPIHTQGFQYSGTYAATGVDNSVSVEKFCKNFKI 73

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
            ++ LTEDD+EFDMIG+DA+IANAFRRILI+E+PTMAIEK+F+A+NTSV+ DEVLSHRLG
Sbjct: 74  DIKHLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIADEVLSHRLG 133

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+P+ ADPRLFDY+SE+D P E+NTIV+KLHV C
Sbjct: 134 LIPLDADPRLFDYISENDVPNERNTIVYKLHVSC 167


>ref|XP_004956050.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           rpac1-like [Setaria italica]
          Length = 372

 Score =  227 bits (579), Expect = 1e-57
 Identities = 104/154 (67%), Positives = 133/154 (86%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           D+ D  + KLPDHLELQRTRV+C +DAP HT   +YSGA+  MGV+N + +++F KNF +
Sbjct: 14  DVLDQQENKLPDHLELQRTRVVCNADAPIHTQGYQYSGAFTVMGVDNSVSVEKFCKNFKI 73

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
            ++RLTEDD+EFDMIG+DA+IANAFRRILI+E+PTMAIEK+F+A+NTSV+ DEVLSHRLG
Sbjct: 74  DIKRLTEDDMEFDMIGVDASIANAFRRILISEVPTMAIEKIFMADNTSVIADEVLSHRLG 133

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+P+ ADPRLFDY+SE+D P E+NTIV+KLHV C
Sbjct: 134 LIPLDADPRLFDYISENDVPNERNTIVYKLHVSC 167


>ref|XP_006857745.1| hypothetical protein AMTR_s00061p00192780 [Amborella trichopoda]
           gi|548861841|gb|ERN19212.1| hypothetical protein
           AMTR_s00061p00192780 [Amborella trichopoda]
          Length = 304

 Score =  226 bits (576), Expect = 3e-57
 Identities = 110/170 (64%), Positives = 138/170 (81%), Gaps = 11/170 (6%)
 Frame = -2

Query: 478 QVLSMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFG 299
           +V ++D+PDVPKG+LP+HL  QRTRV+CASDA  HT  I+YSGAY SMGV+N + +++F 
Sbjct: 3   RVSALDMPDVPKGQLPEHLNFQRTRVLCASDAALHTEGIQYSGAYASMGVDNSLNLEKFC 62

Query: 298 KNFCVKVERLTEDD-----------IEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIA 152
           +NF V+V  + +++           IEFDM+GIDA++ANAFRRILIAE+PTMAIEKV IA
Sbjct: 63  ENFKVEVIDIKDEESSGTDWDKENSIEFDMVGIDASLANAFRRILIAEVPTMAIEKVLIA 122

Query: 151 NNTSVVQDEVLSHRLGLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           NNTSVVQDEVL+HRLGL+PIK DPRLF+Y SE+D   EKNTIVFKLHV+C
Sbjct: 123 NNTSVVQDEVLAHRLGLIPIKVDPRLFEYKSENDAATEKNTIVFKLHVKC 172


>ref|XP_006283792.1| hypothetical protein CARUB_v10004883mg [Capsella rubella]
           gi|482552497|gb|EOA16690.1| hypothetical protein
           CARUB_v10004883mg [Capsella rubella]
          Length = 424

 Score =  224 bits (570), Expect = 1e-56
 Identities = 109/154 (70%), Positives = 127/154 (82%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVPKG LP HLEL+RTRV+C  DAPTHT    YSGAY  MGV+N + ++ F +NF V
Sbjct: 25  DLPDVPKG-LPPHLELERTRVVCKVDAPTHTTETIYSGAYAFMGVDNSVNLENFSENFKV 83

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
            V  LTE D+ FDMIGI A IANAFRRIL+AE+P+MAIEKVF+ NNTS+VQDEVL+HRLG
Sbjct: 84  DVISLTETDMVFDMIGIPAGIANAFRRILLAELPSMAIEKVFVVNNTSIVQDEVLAHRLG 143

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           LVPI ADPRLF+Y+SE+D P E NTIVFKLHV+C
Sbjct: 144 LVPIAADPRLFEYLSENDQPNEMNTIVFKLHVKC 177


>ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor]
           gi|241933300|gb|EES06445.1| hypothetical protein
           SORBIDRAFT_04g006420 [Sorghum bicolor]
          Length = 370

 Score =  224 bits (570), Expect = 1e-56
 Identities = 100/152 (65%), Positives = 132/152 (86%)
 Frame = -2

Query: 457 PDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCVKV 278
           P+  + KLPD+LE+QRTRV+C +DAP HT   +YSG + +MGV+N + +++F KNF +++
Sbjct: 15  PNQQENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVSVEKFCKNFKIEI 74

Query: 277 ERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLGLV 98
            RLTEDD+EFDMIGIDA+IANAFRRILIAE+PTMAIEK+F+ +NTSV+ DEVLSHRLGL+
Sbjct: 75  NRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSHRLGLI 134

Query: 97  PIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           P++ADPRLFDY+SE+D P E+NT+V+KLHV C
Sbjct: 135 PLRADPRLFDYISENDVPNERNTVVYKLHVSC 166


>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
           gi|194690246|gb|ACF79207.1| unknown [Zea mays]
           gi|413926820|gb|AFW66752.1| hypothetical protein
           ZEAMMB73_992882 [Zea mays]
          Length = 372

 Score =  224 bits (570), Expect = 1e-56
 Identities = 102/154 (66%), Positives = 133/154 (86%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           D+P+  + KLPD+LELQRTRV+C +DAP HT   +YSGA+ +MG++N + +D+F KNF +
Sbjct: 15  DVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNSVSVDKFCKNFKI 74

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           ++ RLTED +EFDMIGIDA+IANAFRRILI+E+PTMAIEKVF+A+N SV+ DEVLSHRLG
Sbjct: 75  EINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIADEVLSHRLG 134

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+P+ ADPRLF+Y+SE+D P E+NTIV+KLHV C
Sbjct: 135 LIPLDADPRLFEYISENDVPNERNTIVYKLHVSC 168


>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 390

 Score =  223 bits (568), Expect = 2e-56
 Identities = 105/154 (68%), Positives = 129/154 (83%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           +L DV +G+LP H+  Q TRV C  DAPT+T  ++YSG+Y SMGV+N +R+D F +NF +
Sbjct: 30  NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
           KV  L +D +EFDMIGIDAA+ANAFRRILI+E+PTMAIEKVFIANNTSV+QDEVL+HRLG
Sbjct: 90  KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PIK DPRLF+Y+S +DTP EKNTIV KLH RC
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARC 183


>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
           notabilis]
          Length = 411

 Score =  222 bits (566), Expect = 4e-56
 Identities = 110/152 (72%), Positives = 128/152 (84%)
 Frame = -2

Query: 460 LPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCVK 281
           L DVP GKLP HLE QRT V C +DAP HT  I+YSGAY S+GV+N +RMD F  NF V+
Sbjct: 49  LSDVPMGKLPPHLEFQRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVE 108

Query: 280 VERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLGL 101
           V RLTEDD+EFDMIGID A+ANAFRRILI+E+PTMAIE+V IANNTSVVQDEVL+HRLGL
Sbjct: 109 VMRLTEDDMEFDMIGIDPALANAFRRILISEVPTMAIERVLIANNTSVVQDEVLAHRLGL 168

Query: 100 VPIKADPRLFDYMSESDTPKEKNTIVFKLHVR 5
           +PI  DPRLF++ + ++TP EKNTIVFKLHVR
Sbjct: 169 IPINVDPRLFEF-AGNNTPNEKNTIVFKLHVR 199


>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
           gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 385

 Score =  221 bits (564), Expect = 7e-56
 Identities = 106/154 (68%), Positives = 129/154 (83%)
 Frame = -2

Query: 463 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 284
           DLPDVP G LP HLELQRTR +C +DAP H  ++ YSGAY SMGV+N +R++ F ++F V
Sbjct: 25  DLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDFKV 83

Query: 283 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 104
            V  LTE  + FDMIG+ A IANAFRRIL+AE+P+MAIEKVF+ANNTSV+QDEVL+HRLG
Sbjct: 84  DVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHRLG 143

Query: 103 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           L+PI ADPRLF+Y+SE+D P EKNTIVFKLHV+C
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKC 177


>ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           rpac1-like [Brachypodium distachyon]
          Length = 360

 Score =  221 bits (563), Expect = 9e-56
 Identities = 105/158 (66%), Positives = 133/158 (84%), Gaps = 3/158 (1%)
 Frame = -2

Query: 466 MDLPDVP---KGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGK 296
           MD+ DVP   + KLPDHLE QRTRV C +DAPTHT   +YSGA+ +MGV+N + +++F  
Sbjct: 1   MDMDDVPTQQRNKLPDHLERQRTRVTCKADAPTHTQGFQYSGAFAAMGVDNSVSVEKFCN 60

Query: 295 NFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLS 116
           +F +K+ RLTEDD+EFDMIG+DA+IANAFRRILIAE+PTMAIEKVF+ +NTSV+ DEVLS
Sbjct: 61  SFKIKINRLTEDDMEFDMIGVDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLS 120

Query: 115 HRLGLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRC 2
           HRLGL+P+ ADPRLFD++S+ D P E+NTIV+KLHV C
Sbjct: 121 HRLGLIPLDADPRLFDHISD-DVPNERNTIVYKLHVSC 157


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
           [Glycine max]
          Length = 393

 Score =  221 bits (562), Expect = 1e-55
 Identities = 112/159 (70%), Positives = 134/159 (84%), Gaps = 1/159 (0%)
 Frame = -2

Query: 475 VLSMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGK 296
           +LS+D  +VP  KLP HLEL +TRV+C +DAP HT  ++YSGAY  MGV+N +R+D F +
Sbjct: 28  ILSLD--NVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCE 84

Query: 295 NFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLS 116
           NF V+V+RLT+ DIEFDMIGID AIANAFRRILIAE+PTMAIE+V+IANNTSVVQDEVLS
Sbjct: 85  NFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLS 144

Query: 115 HRLGLVPIKADPRLFDYMSES-DTPKEKNTIVFKLHVRC 2
           HRLGL+PI+ADPRLF+Y   + D   EKNTIVFKLHVRC
Sbjct: 145 HRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRC 183