BLASTX nr result
ID: Paeonia23_contig00001146
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00001146
(3067 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 812 0.0
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 792 0.0
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 783 0.0
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 749 0.0
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 754 0.0
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 745 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 743 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 746 0.0
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 751 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 751 0.0
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 738 0.0
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 724 0.0
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 731 0.0
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 726 0.0
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 734 0.0
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 736 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 735 0.0
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 734 0.0
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 715 0.0
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 716 0.0
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 812 bits (2097), Expect(2) = 0.0
Identities = 456/799 (57%), Positives = 516/799 (64%), Gaps = 7/799 (0%)
Frame = +1
Query: 16 MAVQACVQSNMLD--DDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAVQACV+ M+D D+DDEPLVFKRS A SK NQLNS+ KKS + G SGRQV DV
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
S NGQ SS+ KGKT +
Sbjct: 60 STNGQSSSASKGKTTKLSS----------------------------------------- 78
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNS-SIVKEE 543
+KS ASP+ S+ A ASPV AN K SS ++ HSSKQN+ ++VKEE
Sbjct: 79 --------MKSPIASPKASTSFAKASPV----ANPKVSSSSDDRSKHSSKQNTINVVKEE 126
Query: 544 KHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINI 723
K V LS R+ GL+KGS+N+ANKGL ++P KP IN
Sbjct: 127 KELVN---PAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLINSSPASLPVPKPEINR 183
Query: 724 KNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDDQRKSPPV 900
+++SDD E+PLSS+F D+ K + S QQNGS R KS
Sbjct: 184 YSDDSDD--EIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGS--KSSIK 239
Query: 901 FNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAED--DDHVPIAQRIKKSA 1074
NKRPL LS AS P+ N Q S KAEPKA+D DDHVPI+QR+KKSA
Sbjct: 240 VNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRMKKSA 299
Query: 1075 SSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVHNG 1254
+S KS +A QK + PSSGEG+KW TLVHNG
Sbjct: 300 TSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKWNTLVHNG 359
Query: 1255 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKIL 1434
VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVM+DTDY K KF ENFM DW+KIL
Sbjct: 360 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENFMDDWRKIL 419
Query: 1435 GKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKE 1614
GKNH+IQ EDCDF PIYEWHQ WA+++GVKE
Sbjct: 420 GKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMWAIVNGVKE 479
Query: 1615 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHD 1794
KVGNFRVEPP LFRGRGEHPKMGKLK+ IRPSDITINIGK APIPECPIPGE W+E+RHD
Sbjct: 480 KVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWKEIRHD 539
Query: 1795 NTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFT 1974
NTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEK+R LK++I+GIR AYT+DF
Sbjct: 540 NTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAYTKDFA 599
Query: 1975 NKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGK 2154
+KD+TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV PP+ L+FDFLGK
Sbjct: 600 SKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSILKFDFLGK 659
Query: 2155 DSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTY 2334
DSIR KAI +F+ GKRG DDLFD+LDTSKLN HLK LMPGLTAKVFRTY
Sbjct: 660 DSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGLTAKVFRTY 719
Query: 2335 NASITLDEMLSRDTKDGDV 2391
NASITLDEMLSR+TK G+V
Sbjct: 720 NASITLDEMLSRETKGGNV 738
Score = 211 bits (538), Expect(2) = 0.0
Identities = 101/123 (82%), Positives = 113/123 (91%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL K++ELKG+L+ L+TDLARA+KGKPPL+DADGK KRNLTPEALERKI QTNAKIEK
Sbjct: 772 RLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKIEKM 831
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKSLLAKF+W+MDVDP
Sbjct: 832 ERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVDPS 891
Query: 2793 FRF 2801
FRF
Sbjct: 892 FRF 894
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 792 bits (2045), Expect(2) = 0.0
Identities = 431/785 (54%), Positives = 499/785 (63%), Gaps = 5/785 (0%)
Frame = +1
Query: 52 DDDDDEPLVFKRS--TASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 225
DDDDD P+VFKR+ ++SKQNQLNSE+KK+ ++ G SGRQV DV+SPNGQ S++ K K
Sbjct: 15 DDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNK 74
Query: 226 TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKSST 405
++ S+K V KS
Sbjct: 75 SISSSKSPPV----------------------------------------------KSPI 88
Query: 406 ASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQN-SSIVKEEKHSVKHXXXXXXX 582
SP+ S+ S A PVKS + N K S +Q + KQN ++ VKE + +K
Sbjct: 89 LSPKASTSSTKALPVKSPVVNFKASTSLNDQSKQALKQNMTTAVKEGRSPIKGTTEPNSD 148
Query: 583 XXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPL 762
LS R+ KG +N NKG ST+ P S+ P +K D DDE PL
Sbjct: 149 DDDDDDSLPLSARL-----KGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPL 203
Query: 763 SSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXXX 939
S+RF DEKKP+ASK+QQNGS M+ Q+ S + KRPLD
Sbjct: 204 SARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQNSSTLSGKRPLDKGNSSD 263
Query: 940 XXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAPX 1119
S A +K QV++KAE EDDDH+PIAQR+KKS +S+ K S QK
Sbjct: 264 HSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTK 323
Query: 1120 XXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKM 1296
+ PSSG+GQK W+TLVHNGVIFP PY PHGVKM
Sbjct: 324 VVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKM 383
Query: 1297 LYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDF 1476
LY G+PVDLTPEQEEVATMFAVM DTDY K +F +NF DW K+LGKNH I+ + CDF
Sbjct: 384 LYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDF 443
Query: 1477 RPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFR 1656
PIYEWH WA++DGVKEKVGNFRVEPPGLFR
Sbjct: 444 TPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFR 503
Query: 1657 GRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPIN 1836
GRGEHPKMGKLKRRIRPSDITINIGK APIPECPIPGERW++++HDNTVTWLAFWNDPIN
Sbjct: 504 GRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPIN 563
Query: 1837 PKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATY 2016
PKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR AYT+DFT KDV KRQIAVATY
Sbjct: 564 PKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATY 623
Query: 2017 LIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXX 2196
LIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSI+
Sbjct: 624 LIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELP 683
Query: 2197 XXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDT 2376
KAIG+FQ GK SDDLFD+LDTSKLN HLKELMPGLTAKVFRTYNASITLDEML+++T
Sbjct: 684 VYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKET 743
Query: 2377 KDGDV 2391
KDGDV
Sbjct: 744 KDGDV 748
Score = 223 bits (569), Expect(2) = 0.0
Identities = 108/123 (87%), Positives = 117/123 (95%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RLTEK+ ELKGVL+EL+ DL RA+KGKPPLKDADGKQKRNLTP+A+++KI QTNAKIEK
Sbjct: 782 RLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKIDQTNAKIEKM 841
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERDM TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDPD
Sbjct: 842 ERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPD 901
Query: 2793 FRF 2801
FRF
Sbjct: 902 FRF 904
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 783 bits (2022), Expect(2) = 0.0
Identities = 440/801 (54%), Positives = 506/801 (63%), Gaps = 9/801 (1%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC N+ DD +DDEP+VFKR+ +ASKQ+Q NSE +K K G S RQ+ D +
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS QKG+ VP +KPS VK +
Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQ------------------------ 96
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSS-IVKEE 543
VKS +SP+VS+ SA SPV S ANSK S + ++ ++ S+ ++KEE
Sbjct: 97 --------VKSPLSSPKVSTSSAKKSPVSSLPANSKPSTSGSFKVKPFNQHKSATVIKEE 148
Query: 544 KHS-VKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 720
K S ++ LS+R SA SKG+ N +K + KP
Sbjct: 149 KSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSK----------EGSKP--- 195
Query: 721 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDDQ-RKSP 894
E D DDE PLSSRF D+ KP+A KLQ NGS MRD Q K
Sbjct: 196 ---ENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYS 252
Query: 895 PVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD--HVPIAQRIKK 1068
+ NKRP LS + P Q S+K EPKAEDDD H+PI+QRIKK
Sbjct: 253 NMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRIKK 312
Query: 1069 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVH 1248
S +S+ KS S+ +K + PSSGEG+KW L H
Sbjct: 313 SPTSESKS-SSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKWNKLEH 371
Query: 1249 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKK 1428
NGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATMFAVM+DTDY K +F ENF DWKK
Sbjct: 372 NGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGDWKK 431
Query: 1429 ILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGV 1608
ILGKNH+IQ E+CDF PIYEWHQ+ WA +DG
Sbjct: 432 ILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAWVDGK 491
Query: 1609 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVR 1788
KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGK APIPECP+PGERW+EVR
Sbjct: 492 KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWKEVR 551
Query: 1789 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRD 1968
HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEK+R LK+YI+GIR AYT+D
Sbjct: 552 HDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAYTKD 611
Query: 1969 FTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFL 2148
F +KD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFL
Sbjct: 612 FASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 671
Query: 2149 GKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFR 2328
GKDSIR KAI +F+ GK GS DLFD LDTSKLN HLKELMPGLTAKVFR
Sbjct: 672 GKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAKVFR 731
Query: 2329 TYNASITLDEMLSRDTKDGDV 2391
TYNASITLD+MLSR+TK GDV
Sbjct: 732 TYNASITLDDMLSRETKGGDV 752
Score = 208 bits (530), Expect(2) = 0.0
Identities = 103/125 (82%), Positives = 113/125 (90%), Gaps = 2/125 (1%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLK--DADGKQKRNLTPEALERKIAQTNAKIE 2606
RL EK+ ELK V+EEL++DL+R +KGKPPLK +ADGK KRNL PE+LE+KIAQTNAKIE
Sbjct: 786 RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 845
Query: 2607 KTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVD 2786
K ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVD
Sbjct: 846 KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 905
Query: 2787 PDFRF 2801
P FRF
Sbjct: 906 PSFRF 910
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 749 bits (1935), Expect(2) = 0.0
Identities = 419/804 (52%), Positives = 503/804 (62%), Gaps = 12/804 (1%)
Frame = +1
Query: 16 MAVQACVQSNML---DDDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDV 183
MAV+A + + + DDD+D P VFKR+TA S+QN N E+K+ P
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46
Query: 184 QSPNGQRSSSQKGKT-VPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+ NGQ S++ K KT V S+K VK
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSP-------------------------------- 74
Query: 361 XXXXXXXXXCVKSSTASPEVSSL-----SANASPVKSSLANSKGLPSSANQLNHSSKQNS 525
S+ ASP S + S SPVKS +ANSK ++L S + N+
Sbjct: 75 ---PPSQKATTSSAKASPSKSPMRSPVKSPVRSPVKSPVANSKESSPLDDRLKQSPQHNA 131
Query: 526 -SIVKEEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQS 702
++VK+E+ +K LS R+ KG++ + N+G+ + + S
Sbjct: 132 LAVVKKEE--IKDGNGLKSDDNDSEDDKPLSARL-----KGNSKNVNQGIGASKADAAIS 184
Query: 703 QKPNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXXDEKKPMASKLQQNGSTMRDDQ 882
+ +N+K + D DDE+PLSSRF DEKKP+ASK+QQNGST R+ Q
Sbjct: 185 E---VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQ 241
Query: 883 RKSPPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRI 1062
+KS V KRPL +S S+ +K QV++K E KA+DDDH+PI+QR+
Sbjct: 242 QKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDDHIPISQRM 301
Query: 1063 KKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTT 1239
K SA S KS++ KA M P SG+GQK WTT
Sbjct: 302 KNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTT 361
Query: 1240 LVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTD 1419
LVHNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATMFAVM+DTDY +K KF ENF D
Sbjct: 362 LVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWND 421
Query: 1420 WKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVL 1599
W+K+LGKNH+IQ E CDF+PIY+WHQ WA++
Sbjct: 422 WRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIV 481
Query: 1600 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWR 1779
DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGK PIPECPIPGE W+
Sbjct: 482 DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWK 541
Query: 1780 EVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAY 1959
EV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IR AY
Sbjct: 542 EVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIRAAY 601
Query: 1960 TRDFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEF 2139
T+DF ++D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+F
Sbjct: 602 TKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKF 661
Query: 2140 DFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAK 2319
DFLGKDSI+ KAIG+FQ GK+ +DDLFD+LDT+KLN HLKELMPGLTAK
Sbjct: 662 DFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAK 721
Query: 2320 VFRTYNASITLDEMLSRDTKDGDV 2391
VFRTYNASITLD ML++ T DGDV
Sbjct: 722 VFRTYNASITLDGMLNKGTGDGDV 745
Score = 216 bits (549), Expect(2) = 0.0
Identities = 106/124 (85%), Positives = 116/124 (93%), Gaps = 1/124 (0%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPL-KDADGKQKRNLTPEALERKIAQTNAKIEK 2609
RLTEK+ +LKGVL++L DL RA+KGKPPL KD+DGK+KRNL PEALERK+AQTNAKIEK
Sbjct: 779 RLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEK 838
Query: 2610 TERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDP 2789
ERDM TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 839 MERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP 898
Query: 2790 DFRF 2801
+FRF
Sbjct: 899 EFRF 902
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 754 bits (1946), Expect(2) = 0.0
Identities = 427/786 (54%), Positives = 492/786 (62%), Gaps = 6/786 (0%)
Frame = +1
Query: 52 DDDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 225
DDDDD P+VFKR ++ SKQNQLN E KK P ++ Q+ NGQ + QKGK
Sbjct: 18 DDDDDGPIVFKRGGNSTSKQNQLNPEAKK---PSSSS---------QNSNGQSLNLQKGK 65
Query: 226 T-VPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKSS 402
+ +PS+ S +K SS
Sbjct: 66 SPIPSSNASPMK----------------------------------------------SS 79
Query: 403 TASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQN-SSIVKEEKHSVKHXXXXXX 579
T SP+ S+ SA ASP+KS L ++ L SS +QL +SKQ S+ VKEE S+
Sbjct: 80 TGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEETKSI-------V 132
Query: 580 XXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMP 759
LS RI KGS N+ NKG++ ++K+E SDDD E+P
Sbjct: 133 DDEDSEDDKPLSSRI-----KGSTNNVNKGVTAP-----------AHVKDEPSDDD-EVP 175
Query: 760 LSSRFXXXXXXXXXXXXXXXD-EKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXX 936
LSSRF E +P SK Q NGST D Q+KS V KRP+D
Sbjct: 176 LSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPS 235
Query: 937 XXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAP 1116
L A K QV++K E KA+DDDH+ I+QR+KK+ SS KS A +K
Sbjct: 236 NHSSAKKPKLLDACTTTKVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVT 295
Query: 1117 XXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVK 1293
+QP S +GQK WTTLVHNGVIFPPPYKPHGVK
Sbjct: 296 KVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVK 355
Query: 1294 MLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCD 1473
+LYKGKP+DLTPEQEEVATMFAVM DTDY +K +F +NF DW+K+LGKNH+IQK +DCD
Sbjct: 356 ILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCD 415
Query: 1474 FRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLF 1653
F PIYEWHQ WA+++GVKEKVGNFRVEPPGLF
Sbjct: 416 FNPIYEWHQQEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLF 475
Query: 1654 RGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPI 1833
RGRGEHPKMGKLK RIRPSDITINIGK APIPECPIPGERW+EV+HDNTVTWLAFWNDPI
Sbjct: 476 RGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPI 535
Query: 1834 NPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVAT 2013
NPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IR AYT+DF +KD+TKRQIAVAT
Sbjct: 536 NPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVAT 595
Query: 2014 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXX 2193
YLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSIR
Sbjct: 596 YLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVEL 655
Query: 2194 XXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRD 2373
KAIG FQ K+ +DDLFD LDTSKLN HLKELMPGLTAKVFRTYNASITLDE L +
Sbjct: 656 PVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEE 715
Query: 2374 TKDGDV 2391
T+DGDV
Sbjct: 716 TEDGDV 721
Score = 209 bits (531), Expect(2) = 0.0
Identities = 102/123 (82%), Positives = 111/123 (90%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RLTEK+ ELK L+EL+TDL RA+KGKPPLK ADGKQKR+LTPEA+E+KIA TN KIEK
Sbjct: 755 RLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTPEAIEKKIATTNQKIEKM 814
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
E M TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI+KIFNKSLLAKF+WAMDVDP
Sbjct: 815 EMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIFNKSLLAKFTWAMDVDPQ 874
Query: 2793 FRF 2801
FRF
Sbjct: 875 FRF 877
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 745 bits (1923), Expect(2) = 0.0
Identities = 418/802 (52%), Positives = 502/802 (62%), Gaps = 10/802 (1%)
Frame = +1
Query: 16 MAVQACVQSNML---DDDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDV 183
MAV+A + + + DDD+D P VFKR+TA S+QN N E+K+ P
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46
Query: 184 QSPNGQRSSSQKGKT-VPSAKPSGVK---PSMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
+ NGQ S++ K KT V S+K VK PS
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASP----------------- 89
Query: 352 XXXXXXXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNS-S 528
+KS SP S + SPVKS +ANSK ++L + N+ +
Sbjct: 90 -------------LKSPMRSPVKSPVR---SPVKSPVANSKESSPLDDRLKQLPQHNALA 133
Query: 529 IVKEEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQK 708
+VK+E+ +K LS R+ KG+ + N+G+ + + S+
Sbjct: 134 VVKKEE--IKDGNGLKSDDNDSEDDKPLSARL-----KGNTKNVNQGIGASKADAAISE- 185
Query: 709 PNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXXDEKKPMASKLQQNGSTMRDDQRK 888
+N+K + D DDE+PLSSRF DEKKP+ASK+QQNGST R+ Q+K
Sbjct: 186 --VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQQK 243
Query: 889 SPPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKK 1068
S V KRPL +S S+ +K QV++K E KA+DDDH+PI+QR+K
Sbjct: 244 SSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDDHIPISQRMKN 303
Query: 1069 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTTLV 1245
SA S KS++ KA M P SG+GQK WTTLV
Sbjct: 304 SAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLV 363
Query: 1246 HNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWK 1425
HNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATMFAVM+DTDY +K KF ENF DW+
Sbjct: 364 HNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWR 423
Query: 1426 KILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDG 1605
K+LGKNH+IQ E CDF+PIY+WHQ WA++DG
Sbjct: 424 KLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDG 483
Query: 1606 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREV 1785
VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGK PIPECPIPGE W+EV
Sbjct: 484 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEV 543
Query: 1786 RHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTR 1965
+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEK+R LK+YI IR AYT+
Sbjct: 544 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKDYIHSIRAAYTK 603
Query: 1966 DFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDF 2145
DF ++D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDF
Sbjct: 604 DFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDF 663
Query: 2146 LGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVF 2325
LGKDSI+ KAIG+FQ GK+ +DDLFD+LDT+KLN HLKELMPGLTAKVF
Sbjct: 664 LGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVF 723
Query: 2326 RTYNASITLDEMLSRDTKDGDV 2391
RTYNASITLD ML++ T DGDV
Sbjct: 724 RTYNASITLDGMLNKGTGDGDV 745
Score = 216 bits (549), Expect(2) = 0.0
Identities = 106/124 (85%), Positives = 116/124 (93%), Gaps = 1/124 (0%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPL-KDADGKQKRNLTPEALERKIAQTNAKIEK 2609
RLTEK+ +LKGVL++L DL RA+KGKPPL KD+DGK+KRNL PEALERK+AQTNAKIEK
Sbjct: 779 RLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEK 838
Query: 2610 TERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDP 2789
ERDM TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 839 MERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP 898
Query: 2790 DFRF 2801
+FRF
Sbjct: 899 EFRF 902
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 743 bits (1919), Expect(2) = 0.0
Identities = 436/825 (52%), Positives = 492/825 (59%), Gaps = 33/825 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLD-DDDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 189
MAV+AC + M D +DD P++FKRS A KQNQ NSE KK K G S DV+
Sbjct: 1 MAVEACTTNLMEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVRP 60
Query: 190 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369
NG+ SS+QKG+ PSAK V
Sbjct: 61 ANGESSSAQKGRIQPSAKTPPV-------------------------------------- 82
Query: 370 XXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVKE 540
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+ E
Sbjct: 83 --------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFIE 132
Query: 541 EKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 720
K SV LS R SKG +NHANK ++P I
Sbjct: 133 PKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVIE 187
Query: 721 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKSP 894
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 ---ESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSA 244
Query: 895 PVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD------------ 1038
+ NKRP LS I N Q ++K EPKAEDDD
Sbjct: 245 SLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKS 304
Query: 1039 -------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXX 1179
+VPI+QRIKKS +S KS +KA
Sbjct: 305 QSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKT 364
Query: 1180 XXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFA 1359
+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMFA
Sbjct: 365 AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 424
Query: 1360 VMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXX 1539
VM+DTDY K F ENF +DWKKILGKNH+IQ EDCDF PIYEWHQ
Sbjct: 425 VMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 484
Query: 1540 XXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDIT 1719
WA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DIT
Sbjct: 485 KKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 544
Query: 1720 INIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 1899
INIGK APIPECPIPGERW+EVR+ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDK
Sbjct: 545 INIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDK 604
Query: 1900 EKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEADT 2076
EKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 605 EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 664
Query: 2077 VGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFD 2256
VGCCTLKVENV VPPN L+FDFLGKDSIR KAI +F+ GK GS+DLFD
Sbjct: 665 VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 724
Query: 2257 ELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G+V
Sbjct: 725 RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEV 769
Score = 213 bits (541), Expect(2) = 0.0
Identities = 104/123 (84%), Positives = 111/123 (90%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKPP K ADGK KRNL PEALERKI QTNAKIEK
Sbjct: 803 RLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLNPEALERKITQTNAKIEKM 862
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+W+MDVDP
Sbjct: 863 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPS 922
Query: 2793 FRF 2801
FRF
Sbjct: 923 FRF 925
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 746 bits (1927), Expect(2) = 0.0
Identities = 436/827 (52%), Positives = 492/827 (59%), Gaps = 35/827 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDDDDDE-PLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 189
MAV+AC + M D +DDE P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVRP 60
Query: 190 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369
NG+ SS+QKG+ PSAK V
Sbjct: 61 ANGESSSAQKGRIQPSAKTPPV-------------------------------------- 82
Query: 370 XXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVKE 540
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+ E
Sbjct: 83 --------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFIE 132
Query: 541 EKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 720
K SV LS R SKG +NHANK S
Sbjct: 133 PKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK-------EGGDSCSIRRR 184
Query: 721 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKSP 894
+ E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 185 VIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSA 244
Query: 895 PVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEP------------------ 1020
+ NKRP LS I N Q ++K EP
Sbjct: 245 SLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGK 304
Query: 1021 ---------KAEDDDHVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXX 1173
K EDDD+VPIAQRIKKS +S KS + +KA
Sbjct: 305 KSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIK 364
Query: 1174 XXXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 1353
+ P SGEGQKWTTLVHNGVIFPPPY PHGVKMLYK +P+ LTPEQEEVATM
Sbjct: 365 KTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATM 424
Query: 1354 FAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXX 1533
FAVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 FAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTT 484
Query: 1534 XXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSD 1713
WA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP D
Sbjct: 485 EEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRD 544
Query: 1714 ITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1893
ITINIGK APIPECPIPGERW+EVR+DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQS
Sbjct: 545 ITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQS 604
Query: 1894 DKEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEA 2070
DKEKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 605 DKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEA 664
Query: 2071 DTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDL 2250
DTVGCCTLKVENV VPPN L+FDFLGKDSIR KAI +F+ GK GS+DL
Sbjct: 665 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDL 724
Query: 2251 FDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
FD LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G+V
Sbjct: 725 FDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEV 771
Score = 208 bits (529), Expect(2) = 0.0
Identities = 101/123 (82%), Positives = 110/123 (89%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK +EEL+TDL+R +KGKPP K ADGK KRNL PEALERK+AQ NAKIEK
Sbjct: 805 RLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLNPEALERKMAQINAKIEKM 864
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+W+MDVDP
Sbjct: 865 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPS 924
Query: 2793 FRF 2801
FRF
Sbjct: 925 FRF 927
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 751 bits (1939), Expect(2) = 0.0
Identities = 435/826 (52%), Positives = 496/826 (60%), Gaps = 34/826 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS+QKG+ PSAK V
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPV------------------------------------- 83
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 537
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFI 132
Query: 538 EEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 717
E K SV LS R SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 718 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKS 891
E D +DE PLS RF DEKKP+A+K+Q NGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKS 244
Query: 892 PPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD----------- 1038
+ NKRP LS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 1039 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1176
+VPI+QRIKKS +S KS + +KA
Sbjct: 305 SQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1177 XXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1356
+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMF 424
Query: 1357 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1536
AVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1537 XXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1716
WA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1717 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1896
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSD 604
Query: 1897 KEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 2073
KEKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 2074 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLF 2253
TVGCCTLKVENV VPPN L+FDFLGKDSIR KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLF 724
Query: 2254 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS+ T G+V
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEV 770
Score = 196 bits (498), Expect(2) = 0.0
Identities = 98/116 (84%), Positives = 105/116 (90%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKP K ADGK KRNL PEALERKIAQTNAKIEK
Sbjct: 804 RLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKIEKM 863
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMD 2780
ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAM+
Sbjct: 864 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 751 bits (1938), Expect(2) = 0.0
Identities = 434/826 (52%), Positives = 497/826 (60%), Gaps = 34/826 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK ++ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS+QKG+ PSAK V
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPV------------------------------------- 83
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 537
KS +SP+ S+ SA ASP+ S+ ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSAGANSKPSASATSTAKQQNHH--KSSAAFI 132
Query: 538 EEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 717
E K SV LS R SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 718 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKS 891
E D +DE PLS RF DEKKP+A+K+Q NGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKS 244
Query: 892 PPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD----------- 1038
+ NKRP LS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 1039 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1176
+VPI+QRIKKS +S KS + +KA
Sbjct: 305 SQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1177 XXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1356
+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMF 424
Query: 1357 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1536
AVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1537 XXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1716
WA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1717 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1896
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSD 604
Query: 1897 KEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 2073
KEKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 2074 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLF 2253
TVGCCTLKVENV VPPN L+FDFLGKDSIR KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLF 724
Query: 2254 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS+ T G+V
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEV 770
Score = 196 bits (498), Expect(2) = 0.0
Identities = 98/116 (84%), Positives = 105/116 (90%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKP K ADGK KRNL PEALERKIAQTNAKIEK
Sbjct: 804 RLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKIEKM 863
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMD 2780
ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAM+
Sbjct: 864 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 738 bits (1905), Expect(2) = 0.0
Identities = 423/810 (52%), Positives = 498/810 (61%), Gaps = 18/810 (2%)
Frame = +1
Query: 16 MAVQACVQSNMLD---DDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPD 180
MA A + N+ + DDDD PLVFKR ++ +KQNQ N E+KK L
Sbjct: 3 MAAPATAKPNIYEYDEDDDDMPLVFKRGNNSTTKQNQSNPEVKKPLLSS----------- 51
Query: 181 VQSPNGQRSSSQKGK-TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 357
Q+ NGQ S++QKGK TVPS K S V
Sbjct: 52 -QNSNGQSSNAQKGKSTVPSLKASPV---------------------------------- 76
Query: 358 XXXXXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSS-IV 534
KS SP+ S+ SA ASP++S +ANSKG S QL +SKQN+S +V
Sbjct: 77 ------------KSPIGSPKASTSSAKASPLRSPVANSKGSSSLDEQLKQASKQNASNVV 124
Query: 535 KEEKH--------SVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPH 690
K+ SVKH LS R KG+ N+ +K ++
Sbjct: 125 KDVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSAR-----RKGNTNNVSKVVTAPK-- 177
Query: 691 PSQSQKPNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGST 867
+K+E+SDDD ++PL SRF EKKP+ SK+QQNGST
Sbjct: 178 ---------RVKDEDSDDD-KVPLCSRFPMKSTAGTSGNKPNNISEKKPLPSKVQQNGST 227
Query: 868 MRDDQRKSPPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVP 1047
+D Q+K+P + KRPLD LS S K Q ++KAE +D D +P
Sbjct: 228 SKDKQQKAPLIPTKRPLDKANSSEQSSIKKPKLSAGSTITKVKQATVKAEE--DDPDDIP 285
Query: 1048 IAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQ 1227
IAQR K SS+ K SA QKA +QPSS +GQ
Sbjct: 286 IAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKNKKQMKNTKYSKSTKVQPSSTDGQ 345
Query: 1228 K-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIE 1404
K WTTL+HNGVIFPPPYKPHG+K+LYKG+PVDL PEQEEVATMFAVM DTDY +K KF+E
Sbjct: 346 KKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQEEVATMFAVMKDTDYMQKPKFLE 405
Query: 1405 NFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXX 1584
NF DW+K+LG+NH+IQK EDCDF PIYEWH+
Sbjct: 406 NFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEKKKQMSTEEKKAQKEEKLRQEEKY 465
Query: 1585 XWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIP 1764
WA++DGVKEKVGNFRVEPP LFRGRGEHPKMGKLK+RI+PSDITINIGK APIPECPIP
Sbjct: 466 MWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIP 525
Query: 1765 GERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEG 1944
GE W+EV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI
Sbjct: 526 GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHN 585
Query: 1945 IRTAYTRDFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPP 2124
IR AY +D +KD+TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +P
Sbjct: 586 IRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPG 645
Query: 2125 N-KLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELM 2301
+ L+FDFLGKDSIR +AIG FQKGK+ +DDLFD+LDT+KLN HLKELM
Sbjct: 646 SFNLKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELM 705
Query: 2302 PGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
PGLTAKVFRTYNASITLDE L +T+DGDV
Sbjct: 706 PGLTAKVFRTYNASITLDEKLYEETEDGDV 735
Score = 207 bits (527), Expect(2) = 0.0
Identities = 100/123 (81%), Positives = 111/123 (90%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
+L EK+ ELK L+EL+TDL RA+KGKPPLKDADGKQKRNL+PE +E+KIA TN +IEK
Sbjct: 769 KLIEKIEELKATLKELKTDLDRAKKGKPPLKDADGKQKRNLSPENIEKKIASTNQRIEKM 828
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
E +M TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 829 ELNMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPQ 888
Query: 2793 FRF 2801
FRF
Sbjct: 889 FRF 891
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 724 bits (1870), Expect(2) = 0.0
Identities = 414/802 (51%), Positives = 495/802 (61%), Gaps = 10/802 (1%)
Frame = +1
Query: 16 MAVQACVQSNMLDDDDDE--PLVFKRSTASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 189
MAV+ ++ M DDDD++ P+VFKR++AS+QNQL+SEIK S + + GRQ D+ S
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCS 60
Query: 190 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369
NGQ SS K + S
Sbjct: 61 TNGQ--SSNNQKRMTSLP------------------------------------------ 76
Query: 370 XXXXXXCVKSSTASPEVSSLSAN-ASPVKSSLANSKGLPSSANQLNHSSKQN--SSIVKE 540
K+S E+ S A+ +SP+ L S G A+ S ++ +++VKE
Sbjct: 77 --------KTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKSLVNAVVKE 128
Query: 541 EKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 720
E S+ LS+R+ KG+ N NKGL S P
Sbjct: 129 ENVSIN----PSQENSDSEDDKPLSIRL-----KGNPNQPNKGLV--------STVPKNK 171
Query: 721 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDDQRKSPP 897
+K +D DDE+PLSS+F DEKKP+ K+ QNGST RD +K
Sbjct: 172 VKKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAV 231
Query: 898 VFNKRPL--DXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDH-VPIAQRIKK 1068
+ +KRPL + L+ +S P+ + VS+KA+ + +DDD +PI+QR+KK
Sbjct: 232 LSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKK 291
Query: 1069 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTTLV 1245
+++ KS S+ + PS+G+GQK WTTLV
Sbjct: 292 VSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLV 351
Query: 1246 HNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWK 1425
HNGVIFPPPY+ HGVKMLYKGKPVDLTP QEEVATMFAVM DTDY K KF ENF DW+
Sbjct: 352 HNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWR 411
Query: 1426 KILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDG 1605
K+LGKNH+IQ +DCDF PIY+W+Q WA+LDG
Sbjct: 412 KLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDG 471
Query: 1606 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREV 1785
VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGKGAPIPECPIPGERW+EV
Sbjct: 472 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEV 531
Query: 1786 RHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTR 1965
RHDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR AYT+
Sbjct: 532 RHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTK 591
Query: 1966 DFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDF 2145
DFT+KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN LEF+F
Sbjct: 592 DFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNF 651
Query: 2146 LGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVF 2325
LGKDSIR KAI +FQ GK G+DDLFD+LDTSKLN HLK+LMPGLTAKVF
Sbjct: 652 LGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVF 711
Query: 2326 RTYNASITLDEMLSRDTKDGDV 2391
RTYNASITLD+ML+R TK+G+V
Sbjct: 712 RTYNASITLDDMLNRGTKNGEV 733
Score = 218 bits (555), Expect(2) = 0.0
Identities = 105/123 (85%), Positives = 116/123 (94%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++EL+ +L+EL+ DL RA+KGKPPLK +DGKQKRNLTPEALE+KI+QTNAKIEK
Sbjct: 767 RLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKI 826
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERDM TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDPD
Sbjct: 827 ERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPD 886
Query: 2793 FRF 2801
FRF
Sbjct: 887 FRF 889
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
Length = 883
Score = 731 bits (1887), Expect(2) = 0.0
Identities = 426/799 (53%), Positives = 488/799 (61%), Gaps = 7/799 (0%)
Frame = +1
Query: 16 MAVQACVQSNML---DDDDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDV 183
M V+A NM+ DDDDD PLVFKRS ++SK Q E K S NA GRQ DV
Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLSSQKHNA-QVGRQSSDV 59
Query: 184 QSPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
+ NG +++QKGK+V S+ S +KP
Sbjct: 60 RPQNGTNANAQKGKSVTSS--SSMKPP--------------------------------- 84
Query: 364 XXXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEE 543
V+ S SP+ S+ S ASP+KS NSK S + SK S +KEE
Sbjct: 85 ---------VRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVGE----SKSVKSTIKEE 131
Query: 544 KHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINI 723
LS R AG SK + N NK + N S KP
Sbjct: 132 NSEDSEDDKP------------LSARQVAGSSKNNPNQTNKPNAPNLGKKSNVPKPE--- 176
Query: 724 KNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPM-ASKLQQNGSTMRDDQRKSPP 897
D DDE+PLS++F +EKKP+ A K +NGS +RK
Sbjct: 177 -----DSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVARKPDKNGSA--STERKPST 229
Query: 898 VFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDD-DHVPIAQRIKKSA 1074
V KRP D LS S K+ + S+K E KAEDD D VP++QR KKS
Sbjct: 230 VLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKKST 288
Query: 1075 SSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVHNG 1254
+ + K A + + PSSG+GQKWTTLVHNG
Sbjct: 289 TPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKWTTLVHNG 348
Query: 1255 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKIL 1434
VIFPPPYKPHGVKMLYKGKPV+LTPEQEEVATM+AVM++TDY KK +F ENFMTDWKKIL
Sbjct: 349 VIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKKIL 408
Query: 1435 GKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKE 1614
GKNH+IQ E CDF PIYEWHQ WAVLDGV+E
Sbjct: 409 GKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKALKEEKLKLEEKYMWAVLDGVRE 468
Query: 1615 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHD 1794
KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG+ APIPECPI GERW+E+RHD
Sbjct: 469 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGRDAPIPECPIEGERWKEIRHD 528
Query: 1795 NTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFT 1974
NTVTWLA+W+DPIN KEFKYVFLAASS+LKGQSDKEKYEK+R LK+YI+GIRTAYTRDF
Sbjct: 529 NTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFV 588
Query: 1975 NKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGK 2154
+KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFLGK
Sbjct: 589 SKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGK 648
Query: 2155 DSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTY 2334
DSIR KAI +F+ GK+G DDLFD+LDTSKLN HLKELMPGLTAKVFRTY
Sbjct: 649 DSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTY 708
Query: 2335 NASITLDEMLSRDTKDGDV 2391
NASITLD+ LSR+TK GD+
Sbjct: 709 NASITLDDKLSRETKGGDL 727
Score = 211 bits (537), Expect(2) = 0.0
Identities = 105/123 (85%), Positives = 110/123 (89%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELKGVLEEL+TDL RARKGKP L ADGK KRN+ PEALERKIAQT AKIEK
Sbjct: 761 RLDEKIDELKGVLEELKTDLGRARKGKPLLAGADGKAKRNINPEALERKIAQTTAKIEKM 820
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLL KFSWAMDVDP
Sbjct: 821 ERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLEKFSWAMDVDPS 880
Query: 2793 FRF 2801
FRF
Sbjct: 881 FRF 883
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 726 bits (1874), Expect(2) = 0.0
Identities = 419/784 (53%), Positives = 485/784 (61%), Gaps = 4/784 (0%)
Frame = +1
Query: 52 DDDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 225
DDDDD P+VFKR ++ SKQNQ N E KK P ++ Q+ NGQ ++ KGK
Sbjct: 17 DDDDDGPIVFKRGGNSTSKQNQPNLEAKK---PSSSS---------QNSNGQSLNAHKGK 64
Query: 226 TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKSST 405
+ S+ S P VKS
Sbjct: 65 SPISS--SNASP-------------------------------------------VKSPI 79
Query: 406 ASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEEKHSVKHXXXXXXXX 585
SP+ S+ SA ASP+K + S+ +PSS S VKEE +
Sbjct: 80 GSPKASASSAKASPMKPPVTYSR-VPSS-----------SIAVKEETKPI-------VDD 120
Query: 586 XXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPLS 765
LS R KGS N+ANKG++ P++ +K+E SDDD E+PLS
Sbjct: 121 DDSEDDKPLSSRF-----KGSTNNANKGVTV----PAR-------VKDEHSDDD-EVPLS 163
Query: 766 SRFXXXXXXXXXXXXXXXD-EKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXXXX 942
SRF EK + SK+Q NGST +D Q+KS V KRP+D
Sbjct: 164 SRFAAKSNAGSSSCKTISSSEKILLVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQ 223
Query: 943 XXXXXXXLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAPXX 1122
LS AS QV++KAE KA+DDDH+ I+QR+KK++SS KSLS Q
Sbjct: 224 SFAKKPKLSDAST---TKQVTVKAELKADDDDHLTISQRMKKASSSSNKSLSVKQNVTKV 280
Query: 1123 XXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKML 1299
+QP S +GQK W TLVHNGVIFPPPYKPHGVKML
Sbjct: 281 VSFSSKKTTKNNKKQMQNSKYSKSTKVQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKML 340
Query: 1300 YKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFR 1479
YKGKPVDLTPEQEEVATMFAVM DT+Y +K +F++NF DW+ +LGKNH+IQK E CDF
Sbjct: 341 YKGKPVDLTPEQEEVATMFAVMKDTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFN 400
Query: 1480 PIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRG 1659
PIYEWHQ WA+++GVKEKVGNFRVEPPGLFRG
Sbjct: 401 PIYEWHQKEKEKKKQMSTEEKKAVREEKLKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRG 460
Query: 1660 RGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINP 1839
RGEHPKMGKLK RIRPSDITINIGK APIP+CPIPGERW+EV+HDNTVTWLAFWNDPINP
Sbjct: 461 RGEHPKMGKLKSRIRPSDITINIGKDAPIPKCPIPGERWKEVKHDNTVTWLAFWNDPINP 520
Query: 1840 KEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATYL 2019
KEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IRTAYT+DF +KD+TKRQIAVATYL
Sbjct: 521 KEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYL 580
Query: 2020 IDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXX 2199
IDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSIR
Sbjct: 581 IDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPV 640
Query: 2200 XKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTK 2379
KAI +FQ K+ +DDLFD LDTSKLN HLKELMPGLTAKVFRTYNASITLDE L +T+
Sbjct: 641 YKAIRQFQVAKKPTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETE 700
Query: 2380 DGDV 2391
DGDV
Sbjct: 701 DGDV 704
Score = 216 bits (550), Expect(2) = 0.0
Identities = 105/123 (85%), Positives = 112/123 (91%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RLTEK+ ELKG L+E +TDL RA+KGKPPLKDADGKQKRNLTPEA+E+KIA TN KIEK
Sbjct: 738 RLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKKIATTNQKIEKM 797
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
E M TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 798 ELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPQ 857
Query: 2793 FRF 2801
FRF
Sbjct: 858 FRF 860
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 734 bits (1894), Expect(2) = 0.0
Identities = 428/826 (51%), Positives = 490/826 (59%), Gaps = 34/826 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 537
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 538 EEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 717
E K SV L R S SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLIARTSGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 718 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKS 891
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKS 244
Query: 892 PPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD----------- 1038
+ NKR LS I N Q ++K EPKAEDDD
Sbjct: 245 ASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 1039 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1176
+ PI+QRIKKS +S KS + +KA
Sbjct: 305 SQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1177 XXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1356
+ P SGEGQKWTTLVHNGV+F PPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEVATMF 424
Query: 1357 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1536
AVM+DTDY K +F ENF +DWKK+LGKNH +Q EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTE 484
Query: 1537 XXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1716
WA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1717 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1896
TINIGK APIPECPIPGERW+EVR+DNTVTWLAFWNDPIN KE KYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSD 604
Query: 1897 KEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 2073
KEKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 2074 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLF 2253
TVGCCTLKVENV VPPN L+ DF+GKDSIR KAI +F+ GK G DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLF 724
Query: 2254 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKV 770
Score = 205 bits (522), Expect(2) = 0.0
Identities = 100/123 (81%), Positives = 110/123 (89%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKPP K ADG+ KRNL PE+LERKIAQTNAKIEK
Sbjct: 804 RLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGEPKRNLNPESLERKIAQTNAKIEKM 863
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLK VAL TSKI+YLDPRITVAWCKRHEVPIEKIFNKSLLAKF+W+MDVDP
Sbjct: 864 ERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPS 923
Query: 2793 FRF 2801
FRF
Sbjct: 924 FRF 926
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 736 bits (1901), Expect(2) = 0.0
Identities = 427/826 (51%), Positives = 492/826 (59%), Gaps = 34/826 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 537
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 538 EEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 717
E K SV L R S SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLIARTSGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 718 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QRKS 891
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGPMNKS 244
Query: 892 PPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD----------- 1038
+ NKR LS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 1039 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1176
+ PI+QRIKKS +S KS + +KA
Sbjct: 305 SQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1177 XXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1356
+ P SGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMF 424
Query: 1357 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1536
A M+DTDY K +F ENF +DWKKILGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1537 XXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1716
WA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLK+RIRP DI
Sbjct: 485 EKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDI 544
Query: 1717 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1896
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDP+N KE KYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSD 604
Query: 1897 KEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 2073
KEKYEK+R LK+YI GIR AYT+DFT NKD K+Q+AVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKDDDEAD 664
Query: 2074 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLF 2253
TVGCCTLKVENV VPPN L+ DF+GKDSIR KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLF 724
Query: 2254 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKV 770
Score = 201 bits (510), Expect(2) = 0.0
Identities = 99/123 (80%), Positives = 108/123 (87%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKPP K DG+ KRNL PEALERKIAQTNAKIEK
Sbjct: 804 RLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKIEKM 863
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF+WAMDVDP
Sbjct: 864 ERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDVDPS 923
Query: 2793 FRF 2801
FRF
Sbjct: 924 FRF 926
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 735 bits (1897), Expect(2) = 0.0
Identities = 416/801 (51%), Positives = 500/801 (62%), Gaps = 9/801 (1%)
Frame = +1
Query: 16 MAVQACVQSNML---DDDDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDV 183
MAV+A ++N++ DDDDD PLVFKRS T SKQNQ NS +K G SGRQVPDV
Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQNQSNSSSQKQ-----DGRSGRQVPDV 55
Query: 184 QSPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
+SPNGQ SS+ K KT S+K S +
Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSP------------------ 97
Query: 364 XXXXXXXXCVKSSTASPEVSSLSANASPVKSSLA-NSKGLPSSANQLNHSSKQNSSIVKE 540
+ SP +S + A ++S A NS+ S+ NQ + ++Q++ KE
Sbjct: 98 ---------APNFRTSPAPNSRTPPAPNSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKE 148
Query: 541 EKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 720
K +++ LS R+ +GLSK ++ HAN L T+ Q +P
Sbjct: 149 SKQAIEPKSEPNDEAEDSEDDKPLSARVPSGLSKSNSIHANNVLGTSTS--VQKSRPP-- 204
Query: 721 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXXDEKKPMASKLQQNGSTMRDDQRKSPPV 900
++ D DDE+PL+SRF E+ + K++QNG S V
Sbjct: 205 ---KKEDSDDEIPLASRFQMKSSAGASTSKFSSSEE--VKPKIRQNGLP-------SATV 252
Query: 901 FNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD-HVPIAQRIKK--- 1068
+KRP + S+K E K EDDD VP++QRIKK
Sbjct: 253 LSKRPPGEVSLLLRLQLKSLDFLMHLHLFLVSNXSVKTEKKTEDDDDEVPLSQRIKKAVA 312
Query: 1069 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVH 1248
SAS+ +S+ +KA +QPSSG+GQKWTTL H
Sbjct: 313 SASASASKVSSVKKATKVVSSSMKKTKKKLKKPKYSKSSK----LQPSSGDGQKWTTLEH 368
Query: 1249 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKK 1428
NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM+AVM+DT+Y K++F ENFM DW+K
Sbjct: 369 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYLTKQQFKENFMNDWRK 428
Query: 1429 ILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGV 1608
ILGKNH+IQK E+C+F PIYEWHQ+ WA++DGV
Sbjct: 429 ILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAIVDGV 488
Query: 1609 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVR 1788
KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP+DITINIGKG P+PECPIPG+RW+EVR
Sbjct: 489 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVR 548
Query: 1789 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRD 1968
HDNTVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEK+R LK+YIEGIR+AYT+D
Sbjct: 549 HDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKD 608
Query: 1969 FTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFL 2148
FT+KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFL
Sbjct: 609 FTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 668
Query: 2149 GKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFR 2328
GKDSIR KAI +F+ GK+G DDLFD+LDTSKLN HLKELMPGLTAKVFR
Sbjct: 669 GKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFR 728
Query: 2329 TYNASITLDEMLSRDTKDGDV 2391
TYNAS TL++ L++ T+ G++
Sbjct: 729 TYNASFTLEQQLTKLTQGGEL 749
Score = 200 bits (509), Expect(2) = 0.0
Identities = 95/123 (77%), Positives = 109/123 (88%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK +LEE + DLARA+KGKPP+K ADGK KRNLTPEAL++KI QTN KI+
Sbjct: 783 RLNEKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLTPEALQKKIDQTNVKIDNI 842
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ER + TKE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLLAKF+WAMDV+P
Sbjct: 843 ERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPS 902
Query: 2793 FRF 2801
F F
Sbjct: 903 FTF 905
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 734 bits (1894), Expect(2) = 0.0
Identities = 427/828 (51%), Positives = 492/828 (59%), Gaps = 36/828 (4%)
Frame = +1
Query: 16 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 186
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 187 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 367 XXXXXXXCVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 537
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 538 EEKHSVKHXXXXXXXXXXXXXXXXLSVRISAGLSKGSNNHANK--GLSTNNPHPSQSQKP 711
E K SV L R S SKG +NHANK G S + P
Sbjct: 133 EPKPSVP-PAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSCSIRRP------ 185
Query: 712 NINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDD-QR 885
+ E D +DE PLS RF DEKKP+A+K+QQNGS RD
Sbjct: 186 ---VVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMN 242
Query: 886 KSPPVFNKRPLDXXXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD--------- 1038
KS + NKR LS I N Q ++K EPKAEDDD
Sbjct: 243 KSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRG 302
Query: 1039 ----------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXX 1170
+ PI+QRIKKS +S KS + +KA
Sbjct: 303 KKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVI 362
Query: 1171 XXXXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVAT 1350
+ P SGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEEVAT
Sbjct: 363 KKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVAT 422
Query: 1351 MFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXX 1530
MFA M+DTDY K +F ENF +DWKKILGKNH IQ EDCDF PIYEWHQ
Sbjct: 423 MFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMT 482
Query: 1531 XXXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS 1710
WA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLK+RI P
Sbjct: 483 TEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPR 542
Query: 1711 DITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 1890
DITINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDP+N KE KYVFLA SS+LKGQ
Sbjct: 543 DITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQ 602
Query: 1891 SDKEKYEKSRTLKNYIEGIRTAYTRDFT-NKDVTKRQIAVATYLIDKLALRAGNEKDDDE 2067
SDKEKYEK+R LK+YI GIR AYT+DFT NKD K+QIAVATYLIDKLALRAGNEKDDDE
Sbjct: 603 SDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDE 662
Query: 2068 ADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXXKAIGEFQKGKRGSDD 2247
ADTVGCCTLKVENV VPPN L+ DF+GKDSIR KAI +F+ GK GS+D
Sbjct: 663 ADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSED 722
Query: 2248 LFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDV 2391
LFD LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V
Sbjct: 723 LFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKV 770
Score = 201 bits (510), Expect(2) = 0.0
Identities = 99/123 (80%), Positives = 108/123 (87%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL EK++ELK LEEL+TDL+RA+KGKPP K DG+ KRNL PEALERKIAQTNAKIEK
Sbjct: 804 RLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKIEKM 863
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK+FNKSLLAKF+WAMDVDP
Sbjct: 864 ERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDVDPS 923
Query: 2793 FRF 2801
FRF
Sbjct: 924 FRF 926
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 715 bits (1846), Expect(2) = 0.0
Identities = 392/675 (58%), Positives = 439/675 (65%), Gaps = 9/675 (1%)
Frame = +1
Query: 391 VKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEEKHSVKHXXX 570
VK S E ++ P+K+ + +S G + LN S SS E K VK
Sbjct: 58 VKKSDGDSEDEVPLSSKFPLKTYVRSSSGKSLGSKGLNSPSL--SSHPPETKVGVKESSD 115
Query: 571 XXXXXXXXXXXXXLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDD 750
L R A SK ++ KGLS+ QSQK +N KN D +D
Sbjct: 116 DSEDEIPLLLKLQLKSRKGASSSKLLDS---KGLSSPASSRPQSQKAKVNNKNLSDDSED 172
Query: 751 EMPLSSRFXXXXXXXXXXXXXXX-DEKKPMASKLQQNGSTMRDDQR-KSPPVFNKRPLDX 924
E+PLSS+F DEKKP+ S L+ NG + +DD+R KSP NKRPL
Sbjct: 173 EIPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQ 232
Query: 925 XXXXXXXXXXXXXLSGASQPIKNNQVSIKAEPKAEDDD-------HVPIAQRIKKSASSD 1083
L S K QVS+KAE K +DDD + P +R+KKS SSD
Sbjct: 233 ANTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSD 292
Query: 1084 GKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVHNGVIF 1263
K S + P + P+SGEGQKWTTL HNGVIF
Sbjct: 293 NKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTK-VPPNSGEGQKWTTLEHNGVIF 351
Query: 1264 PPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKN 1443
PPPYKPHGVKMLY G+PVDLTPEQEEVATMFAVM DTDYA K +FIENFM DW+ LGKN
Sbjct: 352 PPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKN 411
Query: 1444 HIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKEKVG 1623
H+I+KFE CDF PIYEWH+ WAV+DGVKEKVG
Sbjct: 412 HVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVG 471
Query: 1624 NFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTV 1803
NFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK AP+PECPIPGERW+EVRHDNTV
Sbjct: 472 NFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDNTV 531
Query: 1804 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKD 1983
TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR YT+DFTNKD
Sbjct: 532 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTNKD 591
Query: 1984 VTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSI 2163
KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNKLEFDFLGKDSI
Sbjct: 592 TMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSI 651
Query: 2164 RXXXXXXXXXXXXKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNAS 2343
R KAIG+F+ GK G DDLFD+LDTSKLN HLKELMPGLTAKVFRTYNAS
Sbjct: 652 RYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 711
Query: 2344 ITLDEMLSRDTKDGD 2388
ITLDEML+R+ + GD
Sbjct: 712 ITLDEMLNREARGGD 726
Score = 218 bits (555), Expect(2) = 0.0
Identities = 105/123 (85%), Positives = 115/123 (93%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RL+EKM EL+GVL+EL+TDLARA+KGKPPLKD+DGK K+N+TPE LERKIAQTN KIEK
Sbjct: 761 RLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIEKM 820
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERDM TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 821 ERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVDPS 880
Query: 2793 FRF 2801
FRF
Sbjct: 881 FRF 883
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 716 bits (1849), Expect(2) = 0.0
Identities = 382/603 (63%), Positives = 423/603 (70%), Gaps = 9/603 (1%)
Frame = +1
Query: 610 LSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPLSSRFXXXXX 789
LSVR+S+GL KG + N GL + K E+ DDDD++PLSS+F
Sbjct: 121 LSVRLSSGLPKGKGSSNNVGLGRGGVGGVK--------KEEDDDDDDKIPLSSKFQLKS- 171
Query: 790 XXXXXXXXXXDEKKPMASKLQQNGSTMRDDQRKSPPVFNK-RPLDXXXXXXXXXXXXXX- 963
DEKKP+ K+ QNG T D + KSP V NK RPLD
Sbjct: 172 ----------DEKKPLPLKVNQNGGT--DKRDKSPTVLNKKRPLDGVNSSLGQSSLVKKP 219
Query: 964 -LSGAS-QPIKNNQVSIKAEPKAEDDDH--VPIAQRIKKS-ASSDGKSLSANQKAP--XX 1122
+SG S QP K + KAEPK EDDD +PI+QR+KKS ASS K + A QK
Sbjct: 220 KISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQRMKKSGASSGNKPVPAKQKVTKVVS 279
Query: 1123 XXXXXXXXXXXXXXXXXXXXXXXXXXMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY 1302
+ PSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY
Sbjct: 280 STSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY 339
Query: 1303 KGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRP 1482
KGKPVDLTPEQEEVATMFAVM+DTDY +KEKF ENFM DW+KILGKNH+IQ+ +DCDF P
Sbjct: 340 KGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCDFTP 399
Query: 1483 IYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVLDGVKEKVGNFRVEPPGLFRGR 1662
IYEWHQ WA++DGVKEKVGNFRVEPPGLFRGR
Sbjct: 400 IYEWHQEEKEKKKQMSTEEKKTLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGR 459
Query: 1663 GEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPK 1842
GEHPKMGKLKRRI PSDITINIGK + IPECPIPGE W+EV+HDNTVTWLAFWNDPINPK
Sbjct: 460 GEHPKMGKLKRRIHPSDITINIGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPINPK 519
Query: 1843 EFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATYLI 2022
EFKYVFLAASSSLKGQSDKEKYEK+R LKNYI+ IR YT+DF +KD+TKRQIAVATYLI
Sbjct: 520 EFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVATYLI 579
Query: 2023 DKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXX 2202
DKLALRAGNEKDDDEADTVGCCTLKVENV PPN L+FDFLGKDSIR
Sbjct: 580 DKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVY 639
Query: 2203 KAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKD 2382
KAI +F+ GK GSDDLFD+LDTSKLN HLKELMPGLTAKVFRTYNASITLDEML++DTK+
Sbjct: 640 KAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKDTKE 699
Query: 2383 GDV 2391
GDV
Sbjct: 700 GDV 702
Score = 214 bits (544), Expect(2) = 0.0
Identities = 106/123 (86%), Positives = 116/123 (94%)
Frame = +3
Query: 2433 RLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKT 2612
RLTEK++E+KGVL L+TDLARA+KGKPPLKDADGK +RNLTPEALERKIAQTNAKIEK
Sbjct: 736 RLTEKIDEMKGVLNGLKTDLARAKKGKPPLKDADGK-RRNLTPEALERKIAQTNAKIEKM 794
Query: 2613 ERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPD 2792
ERD +TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEK+FNKSLLAKF+WAMDV PD
Sbjct: 795 ERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNKSLLAKFAWAMDVPPD 854
Query: 2793 FRF 2801
FRF
Sbjct: 855 FRF 857