BLASTX nr result
ID: Paeonia23_contig00000603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia23_contig00000603
(2048 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 514 e-143
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 505 e-140
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas... 476 e-131
ref|XP_004152016.1| PREDICTED: transcription initiation factor I... 471 e-130
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol... 469 e-129
ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phas... 466 e-128
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 464 e-128
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 464 e-128
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 464 e-128
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 464 e-128
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 460 e-126
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 458 e-126
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 457 e-126
ref|XP_003594206.1| Transcription initiation factor IIF subunit ... 447 e-123
ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prun... 447 e-122
ref|XP_004486214.1| PREDICTED: transcription initiation factor I... 442 e-121
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 436 e-119
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 436 e-119
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 435 e-119
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 433 e-118
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 514 bits (1325), Expect = e-143
Identities = 289/543 (53%), Positives = 323/543 (59%), Gaps = 8/543 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LKPSC GCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCY+CGT VTRLIREYN
Sbjct: 1 MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VR +SS +KNYFIGRFVTGLP FSKKK+A+ KWSL+KEGLQGRQ++DALREK+KNKPWLL
Sbjct: 61 VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV-----NFXXXXXXXXXXXXXXXXXXXXXXXXX 905
DGYQRWMMK ANNG AAFGEV
Sbjct: 181 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240
Query: 906 XXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEA 1082
RK R G NK GDDD+EGPRG WEHEEIFTDDDEA
Sbjct: 241 KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA 300
Query: 1083 IGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES-X 1259
+GND E+REDLAPE+P PPEIKQD + GMN+S
Sbjct: 301 VGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDA 360
Query: 1260 XXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXXXXXXXXXXN 1436
SPVLAPKQKD KEEP +NSP N
Sbjct: 361 EDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSN 420
Query: 1437 GDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXX 1616
GDD S SKV P KGT
Sbjct: 421 GDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATP-KGT----PSSSVKTGSTSSA 475
Query: 1617 XXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVI 1796
TE+EIRAVL+++A +TT LV FKARL+++EDKKAFADILR+ISKI +G +YV+
Sbjct: 476 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVV 535
Query: 1797 LRN 1805
LR+
Sbjct: 536 LRD 538
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 505 bits (1300), Expect = e-140
Identities = 284/538 (52%), Positives = 318/538 (59%), Gaps = 8/538 (1%)
Frame = +3
Query: 216 ILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYNVRASS 395
+LKPSC GCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCY+CGT VTRLIREYNVR +S
Sbjct: 1 MLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNS 60
Query: 396 SNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLLEDETG 575
S +KNYFIGRFVTGLP FSKKK+A+ KWSL+KEGLQGRQ++DALREK+KNKPWLLEDETG
Sbjct: 61 SGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETG 120
Query: 576 QFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXXXXXXX 755
Q+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 QYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR 180
Query: 756 XXDGYQRWMMKVANNGAAAFGEV-----NFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 920
DGYQRWMMK ANNG AAFGEV
Sbjct: 181 TADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEED 240
Query: 921 XXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGNDA 1097
RK R G NK GDDD+EGPRG WEHEEIFTDDDEA+GND
Sbjct: 241 EEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDP 300
Query: 1098 EDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES-XXXXXX 1274
E+REDLAPE+P PPEIKQD + GMN+S
Sbjct: 301 EEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDD 360
Query: 1275 XXXXXXXXTSPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXXXXXXXXXXNGDDXX 1451
SPVLAPKQKD KEEP +NSP NGDD
Sbjct: 361 DEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMK 420
Query: 1452 XXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXXTE 1631
S SKV P KGT TE
Sbjct: 421 TTNGGPPKKVKTENESKSSAKDEGPSPSKVTATP-KGT----PSSSVKTGSTSSAGPVTE 475
Query: 1632 EEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1805
+EIRAVL+++A +TT LV FKARL+++EDKKAFADILR+ISKI +G +YV+LR+
Sbjct: 476 DEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 533
>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
gi|561027365|gb|ESW26005.1| hypothetical protein
PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 476 bits (1224), Expect = e-131
Identities = 268/541 (49%), Positives = 312/541 (57%), Gaps = 6/541 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DL+LKP+CGGCGSTTDLYGSNCKHMTLCL+CGKTMAEN KC++CG TVTRLIREY+
Sbjct: 1 MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRASS ++K+YFIGRFV+GLP+FSKKKSAE KWSL KEGLQ RQ+TDALREK+KNKPWLL
Sbjct: 61 VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ Q+ G LEGA SATYYLLMM+ KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGE---VNFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGY+RWMMK ANNG AAFGE +
Sbjct: 181 KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240
Query: 912 XXXXXXGGSRKKRPGQN-KGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
+R+ R G N KGGDDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 241 EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPE+P PPEIKQD RT+G+NES
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQD-DEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAED 359
Query: 1269 XXXXXXXXXXTS--PVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXNGD 1442
PV+A K KD KEEP +NSP +
Sbjct: 360 DDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTARGTLSTSKPSKGKRKLN 419
Query: 1443 DXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXX 1622
+ ++ N+ P KG +
Sbjct: 420 EETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKG-VPPTPSSKGGSSSPIASGP 478
Query: 1623 XTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILR 1802
+EEEIRAVLM++ +TT LV F+ARLR EDKKAFADIL++ISKI + SYVILR
Sbjct: 479 VSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNASSYVILR 538
Query: 1803 N 1805
+
Sbjct: 539 D 539
>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Cucumis sativus] gi|449517383|ref|XP_004165725.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Cucumis sativus]
Length = 538
Score = 471 bits (1213), Expect = e-130
Identities = 272/547 (49%), Positives = 313/547 (57%), Gaps = 13/547 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LK SC GCGSTT+LYGSNCKHMTLCL+CGKTMAEN GKCY+CG TVTRLIREYN
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRAS+SN+KNYFIGRF++GLPNFSKK++AE KWSL KEGLQGRQL+DALREK+KN+PWLL
Sbjct: 61 VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQFQ+ G LEG+ SATYYLL++QGKEF AIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGY+RWMMK A+NG AAFGEV +
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240
Query: 912 XXXXXXGGSRKKRPGQNK---GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEA 1082
+RK R G +K G DDD+EGPRG WEHEEIFTDDDE
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
Query: 1083 IGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXX 1262
D E+REDLAPE+P PPEIKQD RT G+N+S
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
Query: 1263 XXXXXXXXXXXXT--SPVLAPKQKDRVKEEPVENSP-XXXXXXXXXXXXXXXXXXXXXXX 1433
T +PVL KQKD VKEE NSP
Sbjct: 361 EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK 420
Query: 1434 NGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVND--IP-QKGTLTXXXXXXXXXXX 1604
NG+D + SK D +P K T +
Sbjct: 421 NGEDVKPSSAPPKKMKTE-------------TESKATDEGVPTSKSTASKGAPASVKTEP 467
Query: 1605 XXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGG 1784
TEEEIRAVL +R +TT LV FKARLR EDK AFA+ILR+IS+I +GG
Sbjct: 468 SSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGG 527
Query: 1785 -SYVILR 1802
SYV+LR
Sbjct: 528 PSYVVLR 534
>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 1 [Theobroma cacao] gi|508781613|gb|EOY28869.1|
Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription initiation
factors isoform 1 [Theobroma cacao]
Length = 549
Score = 469 bits (1208), Expect = e-129
Identities = 272/552 (49%), Positives = 316/552 (57%), Gaps = 17/552 (3%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LK SC GCGST DLYGSNCKHMTLC++CGKTMAEN GKC+ECG VTRLIREYN
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VR S S +KN+FIGRF++GLP+FSKKK+AE KWSL KEGLQGRQLTD LREK+KNKPW+L
Sbjct: 61 VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGY+RWMMK ANNGAAAFGEV +
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240
Query: 912 XXXXXXGGSRKKRPG-QNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
+RK R G KGGDDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 241 EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
N+ E+R DLAPE+P PPEIK+D + G+N+S
Sbjct: 301 NEPEER-DLAPEVPAPPEIKED--EDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADD 357
Query: 1269 XXXXXXXXXXT-SPVLAPKQKDRVKEEPVENSP--XXXXXXXXXXXXXXXXXXXXXXXNG 1439
+ +P A KQKD KEEP +NSP NG
Sbjct: 358 DDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARGTSTASKSAKGKRKANG 417
Query: 1440 DDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKG---------TLTXXXXXXX 1592
DD SASK +P KG T +
Sbjct: 418 DDTKASNGTPLKKVKSETDSKSSVKEESASASK-GSVPPKGTPSSAKAGSTSSAVTSSSA 476
Query: 1593 XXXXXXXXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH 1772
TEEEIRAVL+++A +TT+ LV FKARL++ EDKKAFADILR+ISKI
Sbjct: 477 KAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQK 536
Query: 1773 KDG-GSYVILRN 1805
+G +YV+LR+
Sbjct: 537 TNGPNNYVVLRD 548
>ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
gi|561020883|gb|ESW19654.1| hypothetical protein
PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 466 bits (1199), Expect = e-128
Identities = 268/542 (49%), Positives = 306/542 (56%), Gaps = 7/542 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DL LK SC GCGSTTDLYGSNCKHMTLCLSCGKTMAEN KC +CG T+TRLIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRASS+N+KNYFIGRF+TGLP+FSKKKSAE KW+L KEGL GRQ+TD LREK+KNKPWLL
Sbjct: 61 VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 920
DGYQRWMMK ANNG AAFG+
Sbjct: 181 KNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKESNTGGGRSRKKTGEEEEGHVSDKGE 240
Query: 921 XXXG--GSRKKRPG-QNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGN 1091
RK R G + DDD+EGPRG WEHEEIFTDDDEA+GN
Sbjct: 241 EDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVGN 300
Query: 1092 DAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES---XX 1262
D E+REDLAPE+P PPEIKQD + +G+NES
Sbjct: 301 DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDE 360
Query: 1263 XXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXNGD 1442
PV+A K KD KEEPV+NSP + +
Sbjct: 361 DDDDDDMDDEVGNPPVIATKTKDAPKEEPVDNSPSKPTATGPARGTPSSKSSKGKRKSNE 420
Query: 1443 DXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXX 1622
+ GSASK N P KG T
Sbjct: 421 EVKPTNTATPKKVKQENEPKSSAKDVNGSASKSN-APPKG--TPPSSSSKPGSSATASGP 477
Query: 1623 XTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYVIL 1799
+EEEIRAVL ++ +TT LV FKARLR+ EDK+AFA+IL++ISKI +G SYVIL
Sbjct: 478 VSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVIL 537
Query: 1800 RN 1805
R+
Sbjct: 538 RD 539
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
initiation factor IIF subunit alpha-like isoform X2
[Citrus sinensis]
Length = 538
Score = 464 bits (1195), Expect = e-128
Identities = 270/545 (49%), Positives = 311/545 (57%), Gaps = 11/545 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LKP C GCGS DLYGSNCKHMTLCL+CGKTMAEN KC++CG VTRLIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VR S+S++KNYFIGRFV+GLP+FSKKK+AE KW+L+K+GLQGRQ+TD LREK+KNKPW+L
Sbjct: 61 VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEG+ SATYYLL+M KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGY+RWMMK ANNGAAAFGEV +
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 912 XXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
RK R G NK G DDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPE+P PPEIKQD R NG+NES
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQD--EEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358
Query: 1269 XXXXXXXXXXT---SPVLAPKQKDR-VKEEPVENSP--XXXXXXXXXXXXXXXXXXXXXX 1430
SP+LAPK KD KEEP +NSP
Sbjct: 359 DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418
Query: 1431 XNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXX 1610
NGDD SASK + P KG +
Sbjct: 419 SNGDDARAPSGAPLKKVKTENETKSSARDENVSASK-SSAPAKGASS------SRTGSTS 471
Query: 1611 XXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGS- 1787
T EEIRAVL+++A +TT LV FK RLR+ ED+ AFADIL++ISKI +G S
Sbjct: 472 ASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSN 531
Query: 1788 YVILR 1802
YV+LR
Sbjct: 532 YVVLR 536
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 464 bits (1195), Expect = e-128
Identities = 270/545 (49%), Positives = 311/545 (57%), Gaps = 11/545 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LKP C GCGS DLYGSNCKHMTLCL+CGKTMAEN KC++CG VTRLIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VR S+S++KNYFIGRFV+GLP+FSKKK+AE KW+L+K+GLQGRQ+TD LREK+KNKPW+L
Sbjct: 61 VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEG+ SATYYLL+M KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGY+RWMMK ANNGAAAFGEV +
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 912 XXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
RK R G NK G DDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPE+P PPEIKQD R NG+NES
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQD--EEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358
Query: 1269 XXXXXXXXXXT---SPVLAPKQKDR-VKEEPVENSP--XXXXXXXXXXXXXXXXXXXXXX 1430
SP+LAPK KD KEEP +NSP
Sbjct: 359 DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418
Query: 1431 XNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXX 1610
NGDD SASK + P KG +
Sbjct: 419 SNGDDARAPSGAPLKKVKTENETKSSARDENVSASK-SSAPAKGASS------SRTGSTS 471
Query: 1611 XXXXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGS- 1787
T EEIRAVL+++A +TT LV FK RLR+ ED+ AFADIL++ISKI +G S
Sbjct: 472 ASGPVTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSN 531
Query: 1788 YVILR 1802
YV+LR
Sbjct: 532 YVVLR 536
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 464 bits (1194), Expect = e-128
Identities = 266/540 (49%), Positives = 306/540 (56%), Gaps = 6/540 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DLILKPSC CGS++DLYGS+CKH+TLCLSCGK MAE KCYECGT VTRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK+KNKPWLL
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQFQ+HG LEGA SA YYLLMMQG+E AIPAGSWYNFNKVA+YKQL+L
Sbjct: 120 EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGYQRWMMK ANNG AAFGEV +
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 912 XXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
+RK R G NK G DDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPEIP PPEIKQD + NG+NES
Sbjct: 300 NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAED 359
Query: 1269 XXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXXXXXXNGDD 1445
SPVLAPK K+ KEEPVE NSP D
Sbjct: 360 DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTPTSKSAKTKRKANGD 419
Query: 1446 XXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXX 1625
S++K + +P+ + +
Sbjct: 420 ESKPTSGAPLKKVKTETDAKPGKDETPSSAKNSALPKGASSS------SKTAPSPATGPV 473
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYVILR 1802
TE+EIRAVL++R +TT LV FK+RL+ KEDK AFA++LRKISKI G SYV+LR
Sbjct: 474 TEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLR 533
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
initiation factor IIF subunit alpha-like isoform X2
[Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like isoform X3 [Solanum tuberosum]
Length = 538
Score = 464 bits (1194), Expect = e-128
Identities = 266/540 (49%), Positives = 306/540 (56%), Gaps = 6/540 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DLILKPSC CGS++DLYGS+CKH+TLCLSCGK MAE KCYECGT VTRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK+KNKPWLL
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQFQ+HG LEGA SA YYLLMMQG+E AIPAGSWYNFNKVA+YKQL+L
Sbjct: 120 EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGYQRWMMK ANNG AAFGEV +
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 912 XXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
+RK R G NK G DDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPEIP PPEIKQD + NG+NES
Sbjct: 300 NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAED 359
Query: 1269 XXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXXXXXXNGDD 1445
SPVLAPK K+ KEEPVE NSP D
Sbjct: 360 DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTPTSKSAKTKRKANGD 419
Query: 1446 XXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXX 1625
S++K + +P+ + +
Sbjct: 420 ESKPTSGAPLKKVKTETDAKPGKDETPSSAKNSALPKGASSS------SKTAPSPATGPV 473
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYVILR 1802
TE+EIRAVL++R +TT LV FK+RL+ KEDK AFA++LRKISKI G SYV+LR
Sbjct: 474 TEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLR 533
>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 534
Score = 460 bits (1183), Expect = e-126
Identities = 263/538 (48%), Positives = 302/538 (56%), Gaps = 4/538 (0%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DLILKPSC GCGS +LYGS CKH+TLC+ CGK+MAE KCYECGT +TRLIREYN
Sbjct: 1 MSIDLILKPSCSGCGSAVELYGSTCKHLTLCVKCGKSMAEKRAKCYECGTPITRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRASSS+EKNY IGRF TGLP F KK + W+ KEGLQGRQ+TD+LREKFKNKPWLL
Sbjct: 61 VRASSSSEKNYIIGRFATGLPTFKKKN--DNNWTFQKEGLQGRQVTDSLREKFKNKPWLL 118
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQFQYHG EG+ SATYYLLM+QGKEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 119 EDETGQFQYHGHFEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 178
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEVN--FXXXXXXXXXXXXXXXXXXXXXXXXXXXX 914
DGYQRWMMK ANNG AAFGEV
Sbjct: 179 KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDGEGASGGGRGRKKSTGDDDEGNVSDRGD 238
Query: 915 XXXXXGGSRKKRPGQN-KGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGN 1091
SRK R G N K DDD+EGPRG WEHEEIFTDDDEA+GN
Sbjct: 239 EDEEEEASRKGRLGLNKKHADDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDDEAVGN 298
Query: 1092 DAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES-XXXX 1268
D E+REDLAPEIP PPEIKQD R+NGM++S
Sbjct: 299 DPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELKKLLGRSNGMDDSDAEDD 358
Query: 1269 XXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXNGDDX 1448
SPVLAPK K+ KEEP++NSP + +
Sbjct: 359 DDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLKSTTSGAGRGTPNGSKSKSKRKSNGEE 417
Query: 1449 XXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXXT 1628
GS+SK + P KG T
Sbjct: 418 SKTTNGAPLKKAKTENEVKSVKDEIGSSSK-SSAPTKGA---TPPAPSVSASAPPTGPVT 473
Query: 1629 EEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILR 1802
EEEIRAVL+++ +TT LV FK+RL+ KEDK AFA ILR+IS+I +G ++V+LR
Sbjct: 474 EEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLR 531
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 458 bits (1179), Expect = e-126
Identities = 265/540 (49%), Positives = 305/540 (56%), Gaps = 6/540 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DLILKPSC CGS++DLYGS+CKH+TLCLSCGK MAE KCYECGT VTRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRA SSN+KN+FI RF +GLP FSKKK+ + KW+L KEGLQGRQ+TD LREK+KNKPWLL
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQFQ+HG LEGA SA YYLLMMQG+E AIPAGSWYNFNKVA+YKQL+L
Sbjct: 120 EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXX 911
DGYQRWMMK ANNG AAFGE+ +
Sbjct: 180 KNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239
Query: 912 XXXXXXGGSRKKRPGQNKGG-DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIG 1088
+RK R G NK G DDD+EGPRG WEHEEIFTDDDEA+G
Sbjct: 240 DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299
Query: 1089 NDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXX 1268
ND E+REDLAPEIP PPEIKQD + NG+NES
Sbjct: 300 NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNES-DED 358
Query: 1269 XXXXXXXXXXTSPVLAPKQKDRVKEEPVE-NSPXXXXXXXXXXXXXXXXXXXXXXXNGDD 1445
SPVLAPK K+ KEEPVE NSP D
Sbjct: 359 DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNRGTPTSKSAKTKRKANGD 418
Query: 1446 XXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXX 1625
S++K +P+ + +
Sbjct: 419 ESKPTSGAPLKKVKTEADAKPGKDETPSSAKNTALPKGASSS------SKTAPSSATGPV 472
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYVILR 1802
TE+EIRAVL++R +TT LV FK+RL+ KEDK AFA++LRKISKI G SYV+LR
Sbjct: 473 TEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLR 532
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 457 bits (1176), Expect = e-126
Identities = 266/542 (49%), Positives = 301/542 (55%), Gaps = 7/542 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DL LK SC GCGSTTDLYGSNCKHMTLCL CGKTMA KC +CG T+TRLIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRASS N+KNYFIGRF+ GLP+FSKKKSAE KWSL K+GL GRQ+TD LREK+KNKPWLL
Sbjct: 61 VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEVN--FXXXXXXXXXXXXXXXXXXXXXXXXXXXX 914
DGYQRWMMK ANNG AAFGE
Sbjct: 181 KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVSDKGE 240
Query: 915 XXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGN 1091
RK R G NK G+DD+EGPRG WEHEEIFTDDDEA+GN
Sbjct: 241 EDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN 300
Query: 1092 DAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES---XX 1262
D E+REDLAPE+P PPEIKQD + +G+NES
Sbjct: 301 DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAEDD 360
Query: 1263 XXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXNGD 1442
PV+A KQKD +KEEP++NSP G
Sbjct: 361 DDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSP-----SKPTATGPARGTPSSKSSKGK 415
Query: 1443 DXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXX 1622
GSASK + P KGT
Sbjct: 416 RKLNEETKPSNTATPKKEPKLSAKDVNGSASK-SSAPPKGT-PPLSSKGGSSTTTTASGP 473
Query: 1623 XTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYVIL 1799
+EEEIRAVL ++ +TT LV FKARLR EDK+AFA+IL++ISKI G SYVIL
Sbjct: 474 VSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGASYVIL 533
Query: 1800 RN 1805
R+
Sbjct: 534 RD 535
>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
truncatula] gi|87241158|gb|ABD33016.1| Transcription
Factor IIF, Rap30/Rap74, interaction [Medicago
truncatula] gi|355483254|gb|AES64457.1| Transcription
initiation factor IIF subunit alpha [Medicago truncatula]
Length = 536
Score = 447 bits (1150), Expect = e-123
Identities = 258/538 (47%), Positives = 301/538 (55%), Gaps = 7/538 (1%)
Frame = +3
Query: 210 DLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYNVRA 389
DL LK SC GCG TT LYGSNCKH+T+C CGKTMAEN KC CG +TRLIREYNVRA
Sbjct: 2 DLQLKSSCSGCGETTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVRA 61
Query: 390 SSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLLEDE 569
SS+N+KNYFIGRF+TGLP+FSKKKSAE KWSL K+GL+GRQ+TDA REK+KN+PWLLEDE
Sbjct: 62 SSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLEDE 121
Query: 570 TGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXXXXX 749
TGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQL+L
Sbjct: 122 TGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 181
Query: 750 XXXXDGYQRWMMKVANNGAAAFGE---VNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 920
DGYQRWMMK ANNG AAFGE ++
Sbjct: 182 KKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEED 241
Query: 921 XXXGGSRKKRPGQNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGNDAE 1100
RKKRP + DDD+EGPRG WEHEEIFTDDDEA+GND E
Sbjct: 242 EDEEVDRKKRPNKKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGNDPE 301
Query: 1101 DREDLAPEIPPPPEIKQD--XXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES--XXXX 1268
+REDLAPE+P PPEIKQD RT G++ES
Sbjct: 302 EREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLSESDDDDDD 361
Query: 1269 XXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXNGDDX 1448
V A KQK+ KEEPV+NSP ++
Sbjct: 362 DDDDIDDEDGVPAVTATKQKE-PKEEPVDNSPSKPTATGPARGTPTSKSSKAKRKANEEA 420
Query: 1449 XXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXXXXXT 1628
GS+SK N P +GT T
Sbjct: 421 KPSISVPPKKVKTENEPKSSAKDVNGSSSKSN-APPRGT---PPPSSNSGSSNAASGPVT 476
Query: 1629 EEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILR 1802
EEEI+AVL++R +TT +LV F+ARLR KEDK+AFA+IL++ISKI +G SYVILR
Sbjct: 477 EEEIKAVLLQRTPLTTQELVAKFRARLRCKEDKEAFANILKRISKIQKTNGSSYVILR 534
>ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
gi|462407404|gb|EMJ12738.1| hypothetical protein
PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 447 bits (1149), Expect = e-122
Identities = 263/544 (48%), Positives = 302/544 (55%), Gaps = 9/544 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MS DL L+ SC GCGST++LYGSNCKHMTLCLSCGKTMAEN KC++CG VTRLIREYN
Sbjct: 1 MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRAS+ N+KNYFIGRFVTGLP+FSKKK+AE KWSL+KEGLQGRQL+D LR+K+KNKPW+L
Sbjct: 61 VRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEGA +ATYYLLM QGKEF AIPAGSW+NFNKVA+YKQL+L
Sbjct: 121 EDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKI 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 920
DGY+RWMMK ANNGAAAFGEV
Sbjct: 181 KNRKKTADGYERWMMKAANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDGEGNVSDKG 240
Query: 921 XXXGG---SRKKRPGQNKGGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGN 1091
+RK R + G DDDD+G RG WEHEEIFTDDDEA+GN
Sbjct: 241 EEDEEEELARKNRLNKKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEAVGN 300
Query: 1092 DAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXXX 1271
+ E+REDL E+P PPEIKQD RT G+++S
Sbjct: 301 NPEEREDLELEVPAPPEIKQD-DEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAEDD 359
Query: 1272 XXXXXXXXXT---SPVLAPKQKDRVKEEPVENSP--XXXXXXXXXXXXXXXXXXXXXXXN 1436
APKQKD KEEP +NSP +
Sbjct: 360 DDDDDDMDDDIGFPQAAAPKQKDASKEEPSDNSPSKPVPSGSARGTPSTAKSAKGKRKLS 419
Query: 1437 GDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXX 1616
DD SASK + P KGT
Sbjct: 420 ADDAKTSNSAPPKKVKSENEQKVSTKEEPASASK-SSTPSKGT------PSVKVEPTSSS 472
Query: 1617 XXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYV 1793
TEEEIR VL++R +TT LV FKARLR +EDK AFA ILRKISKI +G SYV
Sbjct: 473 GPVTEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNGSSYV 532
Query: 1794 ILRN 1805
+LR+
Sbjct: 533 VLRD 536
>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Cicer arietinum]
Length = 538
Score = 442 bits (1138), Expect = e-121
Identities = 263/543 (48%), Positives = 298/543 (54%), Gaps = 9/543 (1%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
M+ DL LK C GC STTDLYGSNCKHMTLCL+CGKTMAEN KCY+CG T+TRLIREYN
Sbjct: 1 MTMDLQLKSCCSGCRSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRASS+N+KNYFIGRF+TGLP+FSKKKSAE KW L K+GLQ R++TDALREKFKN+PWLL
Sbjct: 61 VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREKFKNRPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXX 740
EDETGQ QY G LEG+ SATYYLLM + KEFVA PAGSWYNFNKVA+YKQL+L
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 741 XXXXXXXDGYQRWMMKVANNGAAAFGEVNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 920
DGYQRWMMK ANNG AAFGE
Sbjct: 181 KNRKKTADGYQRWMMKAANNGPAAFGEHGKLDEKESNTGGGRSRKKTGDDDEGVVSDKGE 240
Query: 921 XXXGG--SRKKRPGQNKGG---DDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAI 1085
RK R G NK DD+DEGP+G WEHEEIFTDDDEA+
Sbjct: 241 EDEDEEVDRKSRLGLNKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEIFTDDDEAV 300
Query: 1086 GNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNES--- 1256
GND E+REDLAPEIP PPEIKQD RT+G++ES
Sbjct: 301 GNDPEEREDLAPEIPAPPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTSGLDESDAE 360
Query: 1257 XXXXXXXXXXXXXXTSPVLAPKQKDRVKEEPVENSPXXXXXXXXXXXXXXXXXXXXXXXN 1436
PV A K++ KEEPV+ SP
Sbjct: 361 DDDDDDDDIDDEVGVPPVTAAKKEP--KEEPVDTSP-SKPTTTGPARGTPTSKSSKGKRK 417
Query: 1437 GDDXXXXXXXXXXXXXXXXXXXXXXXXXXGSASKVNDIPQKGTLTXXXXXXXXXXXXXXX 1616
+ GS SK N P KG
Sbjct: 418 ASEEAKPNIAPTKKVKTENEPKSSGKDVNGSTSKSN-APSKGA---PPPPSKAGSSTAAS 473
Query: 1617 XXXTEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMH-KDGGSYV 1793
TEEEIR VLM++ +TT LV FKARLR EDK+AFA+IL++ISKI +G SYV
Sbjct: 474 GPVTEEEIRTVLMQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTNGSSYV 533
Query: 1794 ILR 1802
ILR
Sbjct: 534 ILR 536
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 436 bits (1122), Expect = e-119
Identities = 234/396 (59%), Positives = 255/396 (64%), Gaps = 8/396 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL L+PSC GCGSTTDLYGSNCKHMTLCL+CGKTMAEN GKC++CG VTRLIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRAS+S+EKNYFIGRFVTGLP FSKKK+AE KWSL KEG+ GRQ+TD LREKFKNKPWLL
Sbjct: 61 VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLSLXXXXX 734
EDETGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW YNFNKVA YKQL+L
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180
Query: 735 XXXXXXXXXDGYQRWMMKVANNGAAAFGEV----NFXXXXXXXXXXXXXXXXXXXXXXXX 902
DGY+RWMMK A+NGAAAFGEV +
Sbjct: 181 KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240
Query: 903 XXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDE 1079
RK R G NK GGDDD+EGPRG WEHEEIFTDDDE
Sbjct: 241 DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1080 AIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESX 1259
A+ D E+REDLAPE+P PPEIKQD + NG+NES
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQD-EEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1260 XXXXXXXXXXXXXTSPVLAPKQKDRV-KEEPVENSP 1364
SPVLAPKQKD V KEEP +NSP
Sbjct: 360 AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSP 395
Score = 73.9 bits (180), Expect = 3e-10
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +3
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1805
TEEEIRAVL++ +TT LV FK+RLR EDKKAFADILR+ISKI G ++V+LR+
Sbjct: 475 TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 534
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 436 bits (1122), Expect = e-119
Identities = 234/396 (59%), Positives = 255/396 (64%), Gaps = 8/396 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL L+PSC GCGSTTDLYGSNCKHMTLCL+CGKTMAEN GKC++CG VTRLIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRAS+S+EKNYFIGRFVTGLP FSKKK+AE KWSL KEG+ GRQ+TD LREKFKNKPWLL
Sbjct: 61 VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLSLXXXXX 734
EDETGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW YNFNKVA YKQL+L
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180
Query: 735 XXXXXXXXXDGYQRWMMKVANNGAAAFGEV----NFXXXXXXXXXXXXXXXXXXXXXXXX 902
DGY+RWMMK A+NGAAAFGEV +
Sbjct: 181 KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240
Query: 903 XXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDE 1079
RK R G NK GGDDD+EGPRG WEHEEIFTDDDE
Sbjct: 241 DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1080 AIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESX 1259
A+ D E+REDLAPE+P PPEIKQD + NG+NES
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQD-EEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1260 XXXXXXXXXXXXXTSPVLAPKQKDRV-KEEPVENSP 1364
SPVLAPKQKD V KEEP +NSP
Sbjct: 360 AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSP 395
Score = 73.9 bits (180), Expect = 3e-10
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +3
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1805
TEEEIRAVL++ +TT LV FK+RLR EDKKAFADILR+ISKI G ++V+LR+
Sbjct: 480 TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 539
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 435 bits (1119), Expect = e-119
Identities = 234/396 (59%), Positives = 258/396 (65%), Gaps = 8/396 (2%)
Frame = +3
Query: 201 MSFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYN 380
MSFDL+LKPSC GCGSTTDLYGSNCKHMTLCL+CGKTMAEN GKC++CGTTV+RLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60
Query: 381 VRASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLL 560
VRAS+S++KNYFIGRFVTGLP+FSKKK+AE KWSL+KEG+ GRQ+TDALREKFKNKPWLL
Sbjct: 61 VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120
Query: 561 EDETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLSLXXXXX 734
EDETGQ QY G LEG+ SATYYLLMM GKEFVAIPAGSW YNFNKVA YKQL+L
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180
Query: 735 XXXXXXXXXDGYQRWMMKVANNGAAAFGEV----NFXXXXXXXXXXXXXXXXXXXXXXXX 902
DGY+RWMMK ANNGAAAFGEV +
Sbjct: 181 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240
Query: 903 XXXXXXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDE 1079
RK R G NK GGDDD+EGPRG WEHEEIFTDDDE
Sbjct: 241 DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1080 AIGNDAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESX 1259
A+ D E+REDLAPE+P PPEIKQD + NG+NES
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQD-EDDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1260 XXXXXXXXXXXXXTSPVLAPKQKDRV-KEEPVENSP 1364
SPVLAPKQKD V KEE + SP
Sbjct: 360 VEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISP 395
Score = 75.5 bits (184), Expect = 9e-11
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +3
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1805
TEEEIRAVL++ +TT LV FK+RLR EDKKAFADILR+ISKI G +YV+LR+
Sbjct: 480 TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRD 539
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
tfiif-alpha, putative [Ricinus communis]
Length = 533
Score = 433 bits (1114), Expect = e-118
Identities = 230/393 (58%), Positives = 256/393 (65%), Gaps = 6/393 (1%)
Frame = +3
Query: 204 SFDLILKPSCGGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYECGTTVTRLIREYNV 383
+ DL+LK SC GCGSTTDLYGSNCKHMTLCLSCGKTMAENH KC++CG TV+RLIREYNV
Sbjct: 3 TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62
Query: 384 RASSSNEKNYFIGRFVTGLPNFSKKKSAEIKWSLNKEGLQGRQLTDALREKFKNKPWLLE 563
RASSS++KNYFIGRFVTGLP+FSKKK+AE KWSL KEGLQGRQLTDALREK+KN+PWLLE
Sbjct: 63 RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122
Query: 564 DETGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLSLXXXXXXXX 743
DETGQFQY G LEG+ SATYYLL++QGKEFVAIPA SWYNFNKVA+YKQL+L
Sbjct: 123 DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182
Query: 744 XXXXXXDGYQRWMMKVANNGAAAFGEV---NFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 914
DGY+RWMMK ANNG AAFGEV +
Sbjct: 183 NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242
Query: 915 XXXXXGGSRKKRPGQNK-GGDDDDEGPRGHXXXXXXXXXXXXXXWEHEEIFTDDDEAIGN 1091
+RK R G NK GGDDD+EGPRG WEHEEIFTDDDEA+GN
Sbjct: 243 EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302
Query: 1092 DAEDREDLAPEIPPPPEIKQDXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGMNESXXXXX 1271
D E+REDLAPE+P PPEIKQD R G+N+S
Sbjct: 303 DREEREDLAPEVPAPPEIKQD-EDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDD 361
Query: 1272 XXXXXXXXXT--SPVLAPKQKDRVKEEPVENSP 1364
SPVLAPKQ KEEP +NSP
Sbjct: 362 DDDDDMDEDVSISPVLAPKQTP--KEEPADNSP 392
Score = 76.3 bits (186), Expect = 5e-11
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3
Query: 1626 TEEEIRAVLMKRAAMTTNQLVDVFKARLRNKEDKKAFADILRKISKIMHKDGGSYVILRN 1805
TEEEIRAVL++ +TT LV FK+RL++ EDKKAFADILR+ISKI G SYV+LR+
Sbjct: 473 TEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRD 532