BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia23_contig00000602
         (2415 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33123.3| unnamed protein product [Vitis vinifera]              510   e-141
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   500   e-138
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   496   e-137
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   487   e-135
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   486   e-134
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   484   e-134
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   483   e-133
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol...   482   e-133
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   479   e-132
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   477   e-131
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   477   e-131
ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   468   e-129
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   468   e-129
ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phas...   468   e-129
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   462   e-127
ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prun...   458   e-126
ref|XP_006586768.1| PREDICTED: transcription initiation factor I...   457   e-125
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...   449   e-123
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus...   449   e-123
ref|XP_004486214.1| PREDICTED: transcription initiation factor I...   447   e-123

>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  510 bits (1313), Expect = e-141
 Identities = 286/540 (52%), Positives = 326/540 (60%), Gaps = 11/540 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LKPSCSGCGSTTDLYGSNCKHMTLCLSCGK MA+NHGKCY+CGT +TRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VR +SS DKNYFIGRFVTGLP FSKKK+A+NKWSL+KE LQGRQ++DALREKYKNKPWLL
Sbjct: 61   VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKES--XXXXXXXXXXXXXXXXXXXXXX 1022
                   DGY+RWMMKAANNG AAFGEV K +DKE+                        
Sbjct: 181  KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240

Query: 1023 XXXXXXXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-IFTDDDEA 1199
                       +K  LG NK                              E IFTDDDEA
Sbjct: 241  KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA 300

Query: 1200 IGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES-X 1376
            +G+D E+REDLAPE+P PPEIKQ                           +  G+N+S  
Sbjct: 301  VGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDA 360

Query: 1377 XXXXXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXX 1556
                          SPVLAPKQKD  KEEPAD+SP+K A                     
Sbjct: 361  EDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSA-TASARSTPPTSKSSKGKRKS 419

Query: 1557 XXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSKT------GPVT 1718
              DD K +   P                 G S SK    PKG  +   KT      GPVT
Sbjct: 420  NGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVT 479

Query: 1719 EDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRER 1898
            EDEI+AVL+++A VTT +LV +FKARLK+ EDKKAFADIL+RISKIQK    +YV+LR++
Sbjct: 480  EDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 539


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  500 bits (1288), Expect = e-138
 Identities = 281/535 (52%), Positives = 321/535 (60%), Gaps = 11/535 (2%)
 Frame = +3

Query: 327  ILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYNVRASS 506
            +LKPSCSGCGSTTDLYGSNCKHMTLCLSCGK MA+NHGKCY+CGT +TRLIREYNVR +S
Sbjct: 1    MLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNS 60

Query: 507  SNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLLEDGTG 686
            S DKNYFIGRFVTGLP FSKKK+A+NKWSL+KE LQGRQ++DALREKYKNKPWLLED TG
Sbjct: 61   SGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETG 120

Query: 687  QFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXXXXXXX 866
            Q+QYHGQLEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQLTL            
Sbjct: 121  QYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR 180

Query: 867  XXDGYERWMMKAANNGAAAFGEV-KFEDKES--XXXXXXXXXXXXXXXXXXXXXXXXXXX 1037
              DGY+RWMMKAANNG AAFGEV K +DKE+                             
Sbjct: 181  TADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEED 240

Query: 1038 XXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-IFTDDDEAIGHDA 1214
                  +K  LG NK                              E IFTDDDEA+G+D 
Sbjct: 241  EEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDP 300

Query: 1215 EDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES-XXXXXX 1391
            E+REDLAPE+P PPEIKQ                           +  G+N+S       
Sbjct: 301  EEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDD 360

Query: 1392 XXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXXDDA 1571
                     SPVLAPKQKD  KEEPAD+SP+K A                       DD 
Sbjct: 361  DEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSA-TASARSTPPTSKSSKGKRKSNGDDM 419

Query: 1572 KGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSKT------GPVTEDEIK 1733
            K +   P                 G S SK    PKG  +   KT      GPVTEDEI+
Sbjct: 420  KTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIR 479

Query: 1734 AVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRER 1898
            AVL+++A VTT +LV +FKARLK+ EDKKAFADIL+RISKIQK    +YV+LR++
Sbjct: 480  AVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 534


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  496 bits (1277), Expect = e-137
 Identities = 285/543 (52%), Positives = 320/543 (58%), Gaps = 14/543 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LKPSCSGCGSTTDLYGSNCKHMTLCL+CGK MA+N GKC++CGTT++RLIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRAS+S+DKNYFIGRFVTGLP+FSKKK+AENKWSL+KE + GRQITDALREK+KNKPWLL
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLTLXXXXX 845
            ED TGQ QY G LEG+ SATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQLTL     
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180

Query: 846  XXXXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKES-XXXXXXXXXXXXXXXXXXXXX 1019
                     DGYERWMMKAANNGAAAFGEV K +DKE                       
Sbjct: 181  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240

Query: 1020 XXXXXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDE 1196
                        +K  LG NK                               EIFTDDDE
Sbjct: 241  DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1197 AIGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESX 1376
            A+  D E+REDLAPE+P PPEIKQ                           + NGLNES 
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1377 XXXXXXXXXXXXXTSPVLAPKQKDAV-KEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                          SPVLAPKQKD V KEE AD SP KP                     
Sbjct: 360  VEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKRK 419

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPS--------KTG 1709
               +DAK S   P                    A+KG   PK   TPPS         TG
Sbjct: 420  LNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPK--VTPPSSKTGSTSGSTG 477

Query: 1710 PVTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVIL 1889
            PVTE+EI+AVL++   VTT +LV  FK+RL+TPEDKKAFADIL+RISKIQK    +YV+L
Sbjct: 478  PVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVL 537

Query: 1890 RER 1898
            R++
Sbjct: 538  RDK 540


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  487 bits (1254), Expect = e-135
 Identities = 280/541 (51%), Positives = 318/541 (58%), Gaps = 12/541 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL L+PSCSGCGSTTDLYGSNCKHMTLCL+CGK MA+N GKC++CG  +TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRAS+S++KNYFIGRFVTGLP FSKKK+AENKWSL KE + GRQITD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLTLXXXXX 845
            ED TGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQLTL     
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 846  XXXXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKES-XXXXXXXXXXXXXXXXXXXXX 1019
                     DGYERWMMKAA+NGAAAFGEV K +DK+                       
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 1020 XXXXXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDE 1196
                        +K  LG NK                               EIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1197 AIGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESX 1376
            A+  D E+REDLAPE+P PPEIKQ                           + NGLNES 
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1377 XXXXXXXXXXXXXTSPVLAPKQKDAV-KEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                          SPVLAPKQKDAV KEEPAD+SP KP                     
Sbjct: 360  AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRK 419

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPK----GIQTPPSK--TGPV 1715
               DDAK S   P                    A+KG   PK      +T P+   TGPV
Sbjct: 420  LNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPV 479

Query: 1716 TEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRE 1895
            TE+EI+AVL++   VTT +LV  FK+RL+TPEDKKAFADIL+RISKIQK    ++V+LR+
Sbjct: 480  TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 539

Query: 1896 R 1898
            +
Sbjct: 540  K 540


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  486 bits (1250), Expect = e-134
 Identities = 275/536 (51%), Positives = 314/536 (58%), Gaps = 8/536 (1%)
 Frame = +3

Query: 315  SFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYNV 494
            + DL+LK SCSGCGSTTDLYGSNCKHMTLCLSCGK MA+NH KC++CG T++RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 495  RASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLLE 674
            RASSS+DKNYFIGRFVTGLP+FSKKK+AENKWSL KE LQGRQ+TDALREKYKN+PWLLE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 675  DGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXXX 854
            D TGQFQY G LEG+ SATYYLL++QGKEFVAIPA SWYNFNKVA+YKQLTL        
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 855  XXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXXX 1031
                  DGYERWMMKAANNG AAFGEV K +DK+S                         
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242

Query: 1032 XXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGH 1208
                    +K  LG NK                               EIFTDDDEA+G+
Sbjct: 243  EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302

Query: 1209 DAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXXX 1388
            D E+REDLAPE+P PPEIKQ                           R  GLN+S     
Sbjct: 303  DREEREDLAPEVPAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDD 361

Query: 1389 XXXXXXXXXT--SPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXX 1562
                        SPVLAPKQ    KEEPAD+SP KP                        
Sbjct: 362  DDDDDMDEDVSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNS 419

Query: 1563 DDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPS----KTGPVTEDEI 1730
            D+AK +   P                     SK +  PK    PPS     T PVTE+EI
Sbjct: 420  DEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKA--APPSAKTGSTSPVTEEEI 477

Query: 1731 KAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRER 1898
            +AVL++   VTT +LV  FK+RLK+ EDKKAFADIL+RISKIQK    SYV+LR++
Sbjct: 478  RAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRDK 533


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  484 bits (1246), Expect = e-134
 Identities = 274/542 (50%), Positives = 318/542 (58%), Gaps = 13/542 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DL+LKP+C GCGSTTDLYGSNCKHMTLCL+CGK MA+N  KC++CG T+TRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRASS +DK+YFIGRFV+GLP+FSKKKSAENKWSL KE LQ RQ+TDALREKYKNKPWLL
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ Q+ G LEGA SATYYLLMM+ KEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGE-VKFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAANNG AAFGE  +F++KES                        
Sbjct: 181  KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240

Query: 1029 XXXXXXXXXKKKILGRN-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     ++  LG N K                              EIFTDDDEA+G
Sbjct: 241  EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPE+P PPEIKQ                           RT+GLNES    
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ-DDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAED 359

Query: 1386 XXXXXXXXXXTS--PVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXX 1559
                          PV+A K KDA KEEPAD+SP KPA                      
Sbjct: 360  DDDDDDVDDEAGVPPVIASKPKDAPKEEPADNSPSKPAVTGTARGTLSTSKPSKGKRKLN 419

Query: 1560 XDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSK---------TGP 1712
             +    +G+ P                 G S SK N   KG+   PS          +GP
Sbjct: 420  EETKAANGAPPKKVKIENEPKSTVKDENG-STSKNNTPSKGVPPTPSSKGGSSSPIASGP 478

Query: 1713 VTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILR 1892
            V+E+EI+AVLM++  +TT +LV +F+ARL+ PEDKKAFADILKRISKIQK    SYVILR
Sbjct: 479  VSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNASSYVILR 538

Query: 1893 ER 1898
            +R
Sbjct: 539  DR 540


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  483 bits (1243), Expect = e-133
 Identities = 280/541 (51%), Positives = 318/541 (58%), Gaps = 12/541 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL L+PSCSGCGSTTDLYGSNCKHMTLCL+CGK MA+N GKC++CG  +TRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRAS+S++KNYFIGRFVTGLP FSKKK+AENKWSL KE + GRQITD LREK+KNKPWLL
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSW--YNFNKVAKYKQLTLXXXXX 845
            ED TGQFQY G LEG+ SATYYLLMM GKEFVAIPAGSW  YNFNKVA YKQLTL     
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 846  XXXXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKES-XXXXXXXXXXXXXXXXXXXXX 1019
                     DGYERWMMKAA+NGAAAFGEV K +DK+                       
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 1020 XXXXXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDE 1196
                        +K  LG NK                               EIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 1197 AIGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESX 1376
            A+  D E+REDLAPE+P PPEIKQ                           + NGLNES 
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359

Query: 1377 XXXXXXXXXXXXXTSPVLAPKQKDAV-KEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                          SPVLAPKQKDAV KEEPAD+SP KP                     
Sbjct: 360  AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRK 419

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPK----GIQTPPSK--TGPV 1715
               DDAK S   P                    A+KG   PK      +T P+   TGPV
Sbjct: 420  LNADDAKTSNGAP-----VKKEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPV 474

Query: 1716 TEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRE 1895
            TE+EI+AVL++   VTT +LV  FK+RL+TPEDKKAFADIL+RISKIQK    ++V+LR+
Sbjct: 475  TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 534

Query: 1896 R 1898
            +
Sbjct: 535  K 535


>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao] gi|508781613|gb|EOY28869.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 1 [Theobroma cacao]
          Length = 549

 Score =  482 bits (1240), Expect = e-133
 Identities = 274/552 (49%), Positives = 321/552 (58%), Gaps = 23/552 (4%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LK SCSGCGST DLYGSNCKHMTLC++CGK MA+N GKC+ECG  +TRLIREYN
Sbjct: 1    MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VR S S DKN+FIGRF++GLP+FSKKK+AENKWSL KE LQGRQ+TD LREKYKNKPW+L
Sbjct: 61   VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEG+ SATYYLLMMQGKEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAANNGAAAFGEV KF+DK++                        
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240

Query: 1029 XXXXXXXXXKKKILGRN-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG + K                              EIFTDDDEA+G
Sbjct: 241  EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            ++ E+R DLAPE+P PPEIK+                           +  GLN+S    
Sbjct: 301  NEPEER-DLAPEVPAPPEIKE--DEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADD 357

Query: 1386 XXXXXXXXXXT-SPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXX 1562
                      + +P  A KQKDA KEEPAD+SP+KPA                       
Sbjct: 358  DDDDDDDDDMSFNPAPASKQKDAPKEEPADNSPMKPASSASARGTSTASKSAKGKRKANG 417

Query: 1563 DDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT----------------- 1691
            DD K S   P                   SASKG+V PKG  +                 
Sbjct: 418  DDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSSAK 477

Query: 1692 --PPSKTGPVTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKA 1865
                S  GPVTE+EI+AVL+++A VTT +LV +FKARLK+PEDKKAFADIL+RISKIQK 
Sbjct: 478  AGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKT 537

Query: 1866 K-EGSYVILRER 1898
                +YV+LR++
Sbjct: 538  NGPNNYVVLRDK 549


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Cucumis sativus]
          Length = 538

 Score =  479 bits (1233), Expect = e-132
 Identities = 270/536 (50%), Positives = 317/536 (59%), Gaps = 8/536 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LK SCSGCGSTT+LYGSNCKHMTLCL+CGK MA+N GKCY+CG T+TRLIREYN
Sbjct: 1    MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRAS+SNDKNYFIGRF++GLPNFSKK++AENKWSL KE LQGRQ++DALREKYKN+PWLL
Sbjct: 61   VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQFQ+ G LEG+ SATYYLL++QGKEF AIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAA+NG AAFGEV KF+DKE+                        
Sbjct: 181  KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240

Query: 1029 XXXXXXXXXKKKILGRNK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEA 1199
                     +K  LG +K                                 EIFTDDDE 
Sbjct: 241  EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300

Query: 1200 IGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXX 1379
               D E+REDLAPE+P PPEIKQ                           RT GLN+S  
Sbjct: 301  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360

Query: 1380 XXXXXXXXXXXXT--SPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                        T  +PVL  KQKD VKEE A +SP KP                     
Sbjct: 361  EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPT-PSGSAKGTPSTAKTAKGKR 419

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSK-TGPVTEDEI 1730
               +D K S + P                    ++    AP  ++T PS  +GPVTE+EI
Sbjct: 420  KNGEDVKPSSAPPKKMKTETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEI 479

Query: 1731 KAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVILRE 1895
            +AVL +R  VTT +LV +FKARL+TPEDK AFA+IL+RIS+IQK   G SYV+LR+
Sbjct: 480  RAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK 535


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  477 bits (1227), Expect = e-131
 Identities = 271/540 (50%), Positives = 315/540 (58%), Gaps = 11/540 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LKP CSGCGS  DLYGSNCKHMTLCL+CGK MA+N  KC++CG  +TRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VR S+S+DKNYFIGRFV+GLP+FSKKK+AENKW+L+K+ LQGRQ+TD LREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEG+ SATYYLL+M  KEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAANNGAAAFGEV K +DKES                        
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 1029 XXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG NK                               EIFTDDDEA+G
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPE+P PPEIKQ                           R NGLNES    
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 1386 XXXXXXXXXXT---SPVLAPKQKDA-VKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                          SP+LAPK KD   KEEPAD+SP KPA                    
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT----PPSKTGPVTE 1721
               DDA+     P                  VSASK +   KG  +      S +GPVT 
Sbjct: 419  SNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGASSSRTGSTSASGPVTA 478

Query: 1722 DEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAK-EGSYVILRER 1898
            +EI+AVL+++A VTT +LV +FK RL++ ED+ AFADILKRISKIQK     +YV+LRE+
Sbjct: 479  EEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLREK 538


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  477 bits (1227), Expect = e-131
 Identities = 271/540 (50%), Positives = 315/540 (58%), Gaps = 11/540 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MSFDL+LKP CSGCGS  DLYGSNCKHMTLCL+CGK MA+N  KC++CG  +TRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VR S+S+DKNYFIGRFV+GLP+FSKKK+AENKW+L+K+ LQGRQ+TD LREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEG+ SATYYLL+M  KEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAANNGAAAFGEV K +DKES                        
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 1029 XXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG NK                               EIFTDDDEA+G
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPE+P PPEIKQ                           R NGLNES    
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAED 358

Query: 1386 XXXXXXXXXXT---SPVLAPKQKDA-VKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXX 1553
                          SP+LAPK KD   KEEPAD+SP KPA                    
Sbjct: 359  DDDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRK 418

Query: 1554 XXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT----PPSKTGPVTE 1721
               DDA+     P                  VSASK +   KG  +      S +GPVT 
Sbjct: 419  SNGDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGASSSRTGSTSASGPVTA 478

Query: 1722 DEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAK-EGSYVILRER 1898
            +EI+AVL+++A VTT +LV +FK RL++ ED+ AFADILKRISKIQK     +YV+LRE+
Sbjct: 479  EEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLREK 538


>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  468 bits (1204), Expect = e-129
 Identities = 268/538 (49%), Positives = 314/538 (58%), Gaps = 9/538 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DLILKPSCS CGS++DLYGS+CKH+TLCLSCGK MA+   KCYECGT +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRA SSNDKN+FI RF +GLP FSKKK+ ++KW+L KE LQGRQ+TD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQLTL       
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFGEV +F+DKE                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239

Query: 1029 XXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG NK                               EIFTDDDEA+G
Sbjct: 240  DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPEIP PPEIKQ                           + NGLNES    
Sbjct: 300  NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAED 359

Query: 1386 XXXXXXXXXXTSPVLAPKQKDAVKEEPAD-SSPVKPAXXXXXXXXXXXXXXXXXXXXXXX 1562
                       SPVLAPK K+A KEEP + +SP+KPA                       
Sbjct: 360  DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPA-ASGSNRGTPTSKSAKTKRKANG 418

Query: 1563 DDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT-----PPSKTGPVTEDE 1727
            D++K +   P                   S++K +  PKG  +     P   TGPVTEDE
Sbjct: 419  DESKPTSGAPLKKVKTETDAKPGKDET-PSSAKNSALPKGASSSSKTAPSPATGPVTEDE 477

Query: 1728 IKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVILRER 1898
            I+AVL++R  VTT +LV +FK+RLK  EDK AFA++L++ISKIQK   G SYV+LRER
Sbjct: 478  IRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 535


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Solanum tuberosum]
            gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  468 bits (1204), Expect = e-129
 Identities = 268/538 (49%), Positives = 314/538 (58%), Gaps = 9/538 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DLILKPSCS CGS++DLYGS+CKH+TLCLSCGK MA+   KCYECGT +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRA SSNDKN+FI RF +GLP FSKKK+ ++KW+L KE LQGRQ+TD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQLTL       
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFGEV +F+DKE                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239

Query: 1029 XXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG NK                               EIFTDDDEA+G
Sbjct: 240  DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPEIP PPEIKQ                           + NGLNES    
Sbjct: 300  NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAED 359

Query: 1386 XXXXXXXXXXTSPVLAPKQKDAVKEEPAD-SSPVKPAXXXXXXXXXXXXXXXXXXXXXXX 1562
                       SPVLAPK K+A KEEP + +SP+KPA                       
Sbjct: 360  DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPA-ASGSNRGTPTSKSAKTKRKANG 418

Query: 1563 DDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT-----PPSKTGPVTEDE 1727
            D++K +   P                   S++K +  PKG  +     P   TGPVTEDE
Sbjct: 419  DESKPTSGAPLKKVKTETDAKPGKDET-PSSAKNSALPKGASSSSKTAPSPATGPVTEDE 477

Query: 1728 IKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVILRER 1898
            I+AVL++R  VTT +LV +FK+RLK  EDK AFA++L++ISKIQK   G SYV+LRER
Sbjct: 478  IRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 535


>ref|XP_007147660.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
            gi|561020883|gb|ESW19654.1| hypothetical protein
            PHAVU_006G143600g [Phaseolus vulgaris]
          Length = 540

 Score =  468 bits (1204), Expect = e-129
 Identities = 270/544 (49%), Positives = 312/544 (57%), Gaps = 15/544 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DL LK SCSGCGSTTDLYGSNCKHMTLCLSCGK MA+N  KC +CG TLTRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRASS+NDKNYFIGRF+TGLP+FSKKKSAENKW+L KE L GRQITD LREKYKNKPWLL
Sbjct: 61   VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGE-VKFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFG+  KF++KES                        
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKESNTGGGRSRKKTGEEEEGHVSDKGE 240

Query: 1029 XXXXXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGH 1208
                     K ++    +                              EIFTDDDEA+G+
Sbjct: 241  EDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVGN 300

Query: 1209 DAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES---XX 1379
            D E+REDLAPE+P PPEIKQ                           + +GLNES     
Sbjct: 301  DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDE 360

Query: 1380 XXXXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXX 1559
                          PV+A K KDA KEEP D+SP KP                       
Sbjct: 361  DDDDDDMDDEVGNPPVIATKTKDAPKEEPVDNSPSKPT--ATGPARGTPSSKSSKGKRKS 418

Query: 1560 XDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSK----------TG 1709
             ++ K + +                     SASK N  PKG  TPPS           +G
Sbjct: 419  NEEVKPTNTATPKKVKQENEPKSSAKDVNGSASKSNAPPKG--TPPSSSSKPGSSATASG 476

Query: 1710 PVTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVI 1886
            PV+E+EI+AVL ++  VTT +LV +FKARL++ EDK+AFA+ILKRISKIQK   G SYVI
Sbjct: 477  PVSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVI 536

Query: 1887 LRER 1898
            LR++
Sbjct: 537  LRDK 540


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  462 bits (1188), Expect = e-127
 Identities = 264/537 (49%), Positives = 310/537 (57%), Gaps = 8/537 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DLILKPSCS CGS++DLYGS+CKH+TLCLSCGK MA+   KCYECGT +TRLIREYN
Sbjct: 1    MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRA SSNDKN+FI RF +GLP FSKKK+ ++KW+L KE LQGRQ+TD LREKYKNKPWLL
Sbjct: 61   VRACSSNDKNHFIARFASGLPKFSKKKN-DSKWTLQKEGLQGRQVTDTLREKYKNKPWLL 119

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQFQ+HG LEGA SA YYLLMMQG+E  AIPAGSWYNFNKVA+YKQLTL       
Sbjct: 120  EDETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKM 179

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFGE+ +F+DKE                         
Sbjct: 180  KNRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHG 239

Query: 1029 XXXXXXXXXKKKILGRNK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIG 1205
                     +K  LG NK                               EIFTDDDEA+G
Sbjct: 240  DEDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG 299

Query: 1206 HDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXX 1385
            +D E+REDLAPEIP PPEIKQ                           + NGLNES    
Sbjct: 300  NDPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNES-DED 358

Query: 1386 XXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXXD 1565
                       SPVLAPK K+A KEEP +++    A                       D
Sbjct: 359  DDDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKAAASGSNRGTPTSKSAKTKRKANGD 418

Query: 1566 DAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT-----PPSKTGPVTEDEI 1730
            ++K +   P                   S++K    PKG  +     P S TGPVTEDEI
Sbjct: 419  ESKPTSGAPLKKVKTEADAKPGKDET-PSSAKNTALPKGASSSSKTAPSSATGPVTEDEI 477

Query: 1731 KAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVILRER 1898
            +AVL++R  VTT +LV +FK+RLK  EDK AFA++L++ISKIQK   G SYV+LRER
Sbjct: 478  RAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 534


>ref|XP_007211539.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
            gi|462407404|gb|EMJ12738.1| hypothetical protein
            PRUPE_ppa003970mg [Prunus persica]
          Length = 537

 Score =  458 bits (1178), Expect = e-126
 Identities = 261/538 (48%), Positives = 306/538 (56%), Gaps = 9/538 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DL L+ SCSGCGST++LYGSNCKHMTLCLSCGK MA+N  KC++CG  +TRLIREYN
Sbjct: 1    MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRAS+ NDKNYFIGRFVTGLP+FSKKK+AENKWSL+KE LQGRQ++D LR+KYKNKPW+L
Sbjct: 61   VRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEGA +ATYYLLM QGKEF AIPAGSW+NFNKVA+YKQLTL       
Sbjct: 121  EDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKI 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEV-KFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGYERWMMKAANNGAAAFGEV +F+   S                        
Sbjct: 181  KNRKKTADGYERWMMKAANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDGEGNVSDKG 240

Query: 1029 XXXXXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGH 1208
                     +K  L +                                EIFTDDDEA+G+
Sbjct: 241  EEDEEEELARKNRLNKKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEAVGN 300

Query: 1209 DAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNESXXXXX 1388
            + E+REDL  E+P PPEIKQ                           RT GL++S     
Sbjct: 301  NPEEREDLELEVPAPPEIKQ-DDEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAEDD 359

Query: 1389 XXXXXXXXXT---SPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXX 1559
                             APKQKDA KEEP+D+SP KP                       
Sbjct: 360  DDDDDDMDDDIGFPQAAAPKQKDASKEEPSDNSPSKPVPSGSARGTPSTAKSAKGKRKLS 419

Query: 1560 XDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQT----PPSKTGPVTEDE 1727
             DDAK S S P                   SASK +   KG  +    P S +GPVTE+E
Sbjct: 420  ADDAKTSNSAPPKKVKSENEQKVSTKEEPASASKSSTPSKGTPSVKVEPTSSSGPVTEEE 479

Query: 1728 IKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVILRER 1898
            I+ VL++R  VTT +LV  FKARL+  EDK AFA IL++ISKIQK   G SYV+LR++
Sbjct: 480  IRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNGSSYVVLRDK 537


>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Glycine max]
          Length = 536

 Score =  457 bits (1176), Expect = e-125
 Identities = 268/550 (48%), Positives = 307/550 (55%), Gaps = 21/550 (3%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DL LK SCSGCGSTTDLYGSNCKHMTLCL CGK MA    KC +CG TLTRLIREYN
Sbjct: 1    MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRASS NDKNYFIGRF+ GLP+FSKKKSAENKWSL K+ L GRQITD LREKYKNKPWLL
Sbjct: 61   VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGE-VKFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFGE  KF+D ES                        
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVSDKGE 240

Query: 1029 XXXXXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGH 1208
                     K ++    +                              EIFTDDDEA+G+
Sbjct: 241  EDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN 300

Query: 1209 DAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES---XX 1379
            D E+REDLAPE+P PPEIKQ                           + +GLNES     
Sbjct: 301  DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAEDD 360

Query: 1380 XXXXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXX 1559
                          PV+A KQKDA+KEEP D+SP KP                       
Sbjct: 361  DDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSPSKPT------------ATGPARGTPS 408

Query: 1560 XDDAKGSGSV-----PXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPP--------- 1697
               +KG   +     P                   SASK +  PKG  TPP         
Sbjct: 409  SKSSKGKRKLNEETKPSNTATPKKEPKLSAKDVNGSASKSSAPPKG--TPPLSSKGGSST 466

Query: 1698 --SKTGPVTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKE 1871
              + +GPV+E+EI+AVL ++  VTT +LV +FKARL+  EDK+AFA+ILKRISKIQK   
Sbjct: 467  TTTASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTT 526

Query: 1872 G-SYVILRER 1898
            G SYVILR++
Sbjct: 527  GASYVILRDK 536


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| Transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  449 bits (1156), Expect = e-123
 Identities = 262/538 (48%), Positives = 302/538 (56%), Gaps = 12/538 (2%)
 Frame = +3

Query: 321  DLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYNVRA 500
            DL LK SCSGCG TT LYGSNCKH+T+C  CGK MA+N  KC  CG  LTRLIREYNVRA
Sbjct: 2    DLQLKSSCSGCGETTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVRA 61

Query: 501  SSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLLEDG 680
            SS+NDKNYFIGRF+TGLP+FSKKKSAENKWSL K+ L+GRQ+TDA REKYKN+PWLLED 
Sbjct: 62   SSANDKNYFIGRFMTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLEDE 121

Query: 681  TGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXXXXX 860
            TGQ Q+ G LEG+ SATYYLLM + KEFVAIPAGSWYNFNKVA+YKQLTL          
Sbjct: 122  TGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR 181

Query: 861  XXXXDGYERWMMKAANNGAAAFGE-VKFEDKESXXXXXXXXXXXXXXXXXXXXXXXXXXX 1037
                DGY+RWMMKAANNG AAFGE  K +DKES                           
Sbjct: 182  KKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEED 241

Query: 1038 XXXXXXKKKILGRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGHDAE 1217
                  +KK   +                                EIFTDDDEA+G+D E
Sbjct: 242  EDEEVDRKKRPNKKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGNDPE 301

Query: 1218 DREDLAPEIPPPPEIKQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES--XXXX 1385
            +REDLAPE+P PPEIKQ                             RT GL+ES      
Sbjct: 302  EREDLAPEVPAPPEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLSESDDDDDD 361

Query: 1386 XXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXXD 1565
                         V A KQK+  KEEP D+SP KP                        +
Sbjct: 362  DDDDIDDEDGVPAVTATKQKEP-KEEPVDNSPSKPT--ATGPARGTPTSKSSKAKRKANE 418

Query: 1566 DAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSK-------TGPVTED 1724
            +AK S SVP                   S+SK N  P+G   P S        +GPVTE+
Sbjct: 419  EAKPSISVPPKKVKTENEPKSSAKDVNGSSSKSNAPPRGTPPPSSNSGSSNAASGPVTEE 478

Query: 1725 EIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRER 1898
            EIKAVL++R  +TT ELV +F+ARL+  EDK+AFA+ILKRISKIQK    SYVILRE+
Sbjct: 479  EIKAVLLQRTPLTTQELVAKFRARLRCKEDKEAFANILKRISKIQKTNGSSYVILREK 536


>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
          Length = 534

 Score =  449 bits (1154), Expect = e-123
 Identities = 258/539 (47%), Positives = 308/539 (57%), Gaps = 10/539 (1%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            MS DLILKPSCSGCGS  +LYGS CKH+TLC+ CGK+MA+   KCYECGT +TRLIREYN
Sbjct: 1    MSIDLILKPSCSGCGSAVELYGSTCKHLTLCVKCGKSMAEKRAKCYECGTPITRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRASSS++KNY IGRF TGLP F KK   +N W+  KE LQGRQ+TD+LREK+KNKPWLL
Sbjct: 61   VRASSSSEKNYIIGRFATGLPTFKKKN--DNNWTFQKEGLQGRQVTDSLREKFKNKPWLL 118

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQFQYHG  EG+ SATYYLLM+QGKEFVAIPAGSWYNFNKVA+YKQLTL       
Sbjct: 119  EDETGQFQYHGHFEGSQSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 178

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGEVKFEDKESXXXXXXXXXXXXXXXXXXXXXXXXX 1031
                   DGY+RWMMKAANNG AAFGEV+  D E                          
Sbjct: 179  KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDGEGASGGGRGRKKSTGDDDEGNVSDRGD 238

Query: 1032 XXXXXXXXKKKILGRN-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEAIGH 1208
                    +K  LG N K                              EIFTDDDEA+G+
Sbjct: 239  EDEEEEASRKGRLGLNKKHADDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDDEAVGN 298

Query: 1209 DAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES-XXXX 1385
            D E+REDLAPEIP PPEIKQ                           R+NG+++S     
Sbjct: 299  DPEEREDLAPEIPAPPEIKQDDDDEDEDGEEEGGLSKSGKELKKLLGRSNGMDDSDAEDD 358

Query: 1386 XXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXXXXXXD 1565
                       SPVLAPK K+A KEEP D+SP+K +                       +
Sbjct: 359  DDDDDDMEDDISPVLAPK-KEAPKEEPIDNSPLK-STTSGAGRGTPNGSKSKSKRKSNGE 416

Query: 1566 DAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPS--------KTGPVTE 1721
            ++K +   P                 G S+SK +   KG  TPP+         TGPVTE
Sbjct: 417  ESKTTNGAPLKKAKTENEVKSVKDEIG-SSSKSSAPTKG-ATPPAPSVSASAPPTGPVTE 474

Query: 1722 DEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEGSYVILRER 1898
            +EI+AVL+++  VTT +LV +FK+RLK  EDK AFA IL+RIS+IQK    ++V+LRER
Sbjct: 475  EEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRER 533


>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Cicer arietinum]
          Length = 538

 Score =  447 bits (1151), Expect = e-123
 Identities = 267/544 (49%), Positives = 306/544 (56%), Gaps = 15/544 (2%)
 Frame = +3

Query: 312  MSFDLILKPSCSGCGSTTDLYGSNCKHMTLCLSCGKAMAQNHGKCYECGTTLTRLIREYN 491
            M+ DL LK  CSGC STTDLYGSNCKHMTLCL+CGK MA+N  KCY+CG TLTRLIREYN
Sbjct: 1    MTMDLQLKSCCSGCRSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 60

Query: 492  VRASSSNDKNYFIGRFVTGLPNFSKKKSAENKWSLNKEALQGRQITDALREKYKNKPWLL 671
            VRASS+NDKNYFIGRF+TGLP+FSKKKSAENKW L K+ LQ R++TDALREK+KN+PWLL
Sbjct: 61   VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREKFKNRPWLL 120

Query: 672  EDGTGQFQYHGQLEGAPSATYYLLMMQGKEFVAIPAGSWYNFNKVAKYKQLTLXXXXXXX 851
            ED TGQ QY G LEG+ SATYYLLM + KEFVA PAGSWYNFNKVA+YKQLTL       
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 852  XXXXXXXDGYERWMMKAANNGAAAFGE-VKFEDKESXXXXXXXXXXXXXXXXXXXXXXXX 1028
                   DGY+RWMMKAANNG AAFGE  K ++KES                        
Sbjct: 181  KNRKKTADGYQRWMMKAANNGPAAFGEHGKLDEKESNTGGGRSRKKTGDDDEGVVSDKGE 240

Query: 1029 XXXXXXXXXKKKILGRNK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFTDDDEA 1199
                     K + LG NK                                 EIFTDDDEA
Sbjct: 241  EDEDEEVDRKSR-LGLNKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEIFTDDDEA 299

Query: 1200 IGHDAEDREDLAPEIPPPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRTNGLNES-- 1373
            +G+D E+REDLAPEIP PPEIKQ                           RT+GL+ES  
Sbjct: 300  VGNDPEEREDLAPEIPAPPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTSGLDESDA 359

Query: 1374 -XXXXXXXXXXXXXXTSPVLAPKQKDAVKEEPADSSPVKPAXXXXXXXXXXXXXXXXXXX 1550
                             PV A K++   KEEP D+SP KP                    
Sbjct: 360  EDDDDDDDDIDDEVGVPPVTAAKKEP--KEEPVDTSPSKPT--TTGPARGTPTSKSSKGK 415

Query: 1551 XXXXDDAKGSGSVPXXXXXXXXXXXXXXXXXGVSASKGNVAPKGIQTPPSK-------TG 1709
                ++AK     P                   S SK N   KG   PPSK       +G
Sbjct: 416  RKASEEAK-PNIAPTKKVKTENEPKSSGKDVNGSTSKSNAPSKGAPPPPSKAGSSTAASG 474

Query: 1710 PVTEDEIKAVLMKRASVTTGELVGEFKARLKTPEDKKAFADILKRISKIQKAKEG-SYVI 1886
            PVTE+EI+ VLM++  VTT +LV +FKARL+  EDK+AFA+ILKRISKIQK   G SYVI
Sbjct: 475  PVTEEEIRTVLMQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTNGSSYVI 534

Query: 1887 LRER 1898
            LR R
Sbjct: 535  LRGR 538