BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00027499
         (831 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   292   9e-77
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   244   2e-62
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   240   5e-61
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   233   7e-59
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   231   2e-58
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   229   9e-58
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               228   3e-57
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   228   3e-57
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                223   5e-56
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   221   3e-55
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   220   4e-55
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   219   8e-55
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...   218   3e-54
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       216   1e-53
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               216   1e-53
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   214   2e-53
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   212   2e-52
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   209   1e-51
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   207   3e-51
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   206   1e-50

>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  292 bits (748), Expect = 9e-77
 Identities = 130/276 (47%), Positives = 185/276 (67%)
 Frame = +3

Query: 3    YRSHRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFS 182
            +R H  CD + L+HLCFADD+L+F +G   SV  +H+   NF ++S L+AN  ++ IF +
Sbjct: 509  FRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLA 568

Query: 183  GMDKGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLS 362
            G+D  +  +++ +T    G  PV+YLG+PL+++ L   DC PL++RI +RIK W ++ LS
Sbjct: 569  GVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLS 628

Query: 363  FAGRLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVC 542
            FAGRLQLI SVL SIQV+W+S  ILP++V+ ++EK+LR FLW G  +  +  KV W  +C
Sbjct: 629  FAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEIC 688

Query: 543  LPKQEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCS 722
            LPK EGGLGIKDL  WN+A +  ++W     + + W  WV  Y L+G+S WN   P+ CS
Sbjct: 689  LPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICS 748

Query: 723  WSWRKLLHIREQVRPHIIHKVGNGTNTLLWHDNWHP 830
            W+WRKLL IRE      ++ +G+G  T LW DNWHP
Sbjct: 749  WNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHP 784


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  244 bits (624), Expect = 2e-62
 Identities = 122/274 (44%), Positives = 174/274 (63%), Gaps = 1/274 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD+++FS G+ +S++      + F+A+S L+ +  K+ IF +G+ 
Sbjct: 837  HPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGIS 896

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                 +I+     + G LPVKYLG+PLL+  +T SD +PL+E+I +RI  W +RFLSFAG
Sbjct: 897  PNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAG 956

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RLQLI SVL SI  FW SVF LP+  + E+EK   AFLW+G D N   AK+ W  VC  K
Sbjct: 957  RLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLK 1016

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            +EGGLG+K L+  NE ++ K +WR      SLW+KWV+ + +R ++ W++       SW 
Sbjct: 1017 EEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWL 1076

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNWHP 830
            WRK+L  R++ R     +V +GT T  WHD+W P
Sbjct: 1077 WRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCP 1110


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  240 bits (612), Expect = 5e-61
 Identities = 116/272 (42%), Positives = 166/272 (61%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHL FADD+++ S G  RS+E +      F+  SGL+ +  K+ ++ +G+ 
Sbjct: 690  HPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLS 749

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                  +        G LPV+YLG+PL++  L+ +DC+PL+E++  RI  W SRFLS+AG
Sbjct: 750  ATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAG 809

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL LI SVL+SI  FW + F LPR+ I E+EK   AFLW+GT+ N + AK++W  VC PK
Sbjct: 810  RLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPK 869

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNI-NTPASCSWS 728
             EGGLG++ L+  N+    K +W+    + SLW+KWV  + LR  S W +  T +  SW 
Sbjct: 870  DEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWI 929

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            W+KLL  RE  +     +VGNG  T  W+DNW
Sbjct: 930  WKKLLKYREVAKTLSKVEVGNGKQTSFWYDNW 961


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  233 bits (594), Expect = 7e-59
 Identities = 114/272 (41%), Positives = 164/272 (60%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12  HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
           H  C  + LTHL FADD+++ S G  RS+E +    + F+  SGL+ +  K+ ++F+G+ 
Sbjct: 72  HPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLS 131

Query: 192 KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
             + Q ++       G LPV+YLG+PL++  L+ +D +PLIE I  +I  W +RFLS+AG
Sbjct: 132 HTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAG 191

Query: 372 RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
           RL LI SVL+SI  FW   F LPR  I E++K   A+LW+G D N S AK+ W  VC PK
Sbjct: 192 RLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPK 251

Query: 552 QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            EGGLG++ L+  N+ +  K +WR      SLW+KW+HA  L+  S W +    S  SW 
Sbjct: 252 DEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENTSLGSWM 311

Query: 729 WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
           W+K+L  R+        +V NG +T  W+DNW
Sbjct: 312 WKKVLKFRDAAIQLCKAEVNNGAHTFFWYDNW 343


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  231 bits (590), Expect = 2e-58
 Identities = 119/272 (43%), Positives = 166/272 (61%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD++I + G  RSV+ +   L  F+A  GL+    KT ++ +G+ 
Sbjct: 411  HPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVS 470

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
              + Q +        G LPV+YLG+PL++  LT SD  PLI++I  RI +W SR+LSFAG
Sbjct: 471  DHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAG 530

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL LI+SVL+SI  FW + F LPR  I E+ +   A LW+G + N   AKV+WD +C PK
Sbjct: 531  RLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPK 590

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            +EGGLG++ L+  N+ +  K +WR      SLW+KW     L+ +S W+I T ++  SW 
Sbjct: 591  KEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWI 650

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            WR+LL  RE  +     +V NG NT  W DNW
Sbjct: 651  WRRLLKHREVAKSFCKIEVNNGVNTSFWFDNW 682


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score =  229 bits (584), Expect = 9e-58
 Identities = 106/271 (39%), Positives = 162/271 (59%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHL FADD+++ + G  RS+E +     +F+  SGL+ +  KT I+F+G+ 
Sbjct: 208  HPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGIS 267

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
            K  C+          G LPV+YL +PL++   T  D  PL+E+I  RI  W +RFLS+AG
Sbjct: 268  KSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAG 327

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL L+ SVL+SI  FW S F LPR  + E++K   AFLW+G + + + AK+ W+TVC PK
Sbjct: 328  RLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPK 387

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCSWSW 731
            +EGGLG++ ++  N+    K +WR      SLW++W+  Y L+ ++ W+  + +  SW W
Sbjct: 388  REGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMW 447

Query: 732  RKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            +KLL  R+  +      + NG     W+D+W
Sbjct: 448  KKLLKYRDTAKAFSKVDIRNGETASFWYDDW 478


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  228 bits (580), Expect = 3e-57
 Identities = 114/272 (41%), Positives = 165/272 (60%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHL FADD+++ S G  RS+E +      F   SGL+ +  K+ ++ +G+ 
Sbjct: 337  HPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVS 396

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                Q I        G LPV+YLG+PL++  LT +D  PL+E+I  RI  W  RF SFAG
Sbjct: 397  PIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAG 456

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            R  LI SVL+SI  FW + F LPR+ I E++K   +FLW+G++ +   AK++WD VC PK
Sbjct: 457  RFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPK 516

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
             EGGLG+++L+  N+ +  K +WR   ++ SLW KWV  Y +R  SIW++    S  SW 
Sbjct: 517  AEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWI 576

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            WRK+L IR+  +     +VGNG +   W+D+W
Sbjct: 577  WRKILKIRDVAKSFSRVEVGNGESASFWYDHW 608


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  228 bits (580), Expect = 3e-57
 Identities = 116/272 (42%), Positives = 160/272 (58%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12  HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
           H  C  + LTHLCFADD++I + G  RSV+ +   +  F+  SGLQ N  KT ++ +G+ 
Sbjct: 95  HPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVS 154

Query: 192 KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                 ++       G LPV+YLG+PL++  LT  D  PL E+I +RI  W SR+LSFAG
Sbjct: 155 DHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAG 214

Query: 372 RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
           RL LI SVL+S   FW S F LP   + E+     AFLW+G + +   AKV+WD +C PK
Sbjct: 215 RLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPK 274

Query: 552 QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
           QEGGLG++ L   N  +V K +WR   +  SLW+KW     L+ +S W++   +S  SW 
Sbjct: 275 QEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWM 334

Query: 729 WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
           W+K+L  RE  +P    +V NG  T  W DNW
Sbjct: 335 WKKMLKYRETAKPFSRVEVNNGARTSFWFDNW 366


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  223 bits (569), Expect = 5e-56
 Identities = 112/272 (41%), Positives = 164/272 (60%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD+++F  G  RSVE V N  + F+  SGL  +  K+ ++ +G+ 
Sbjct: 263  HPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVS 322

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
            +     I+       G LPV+YLG+PLL+  +T +D  PL++++ S+I  W +R LS+AG
Sbjct: 323  ELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAG 382

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL LI+SV+ S+  FW S + LP   I E+EK   AFLW+G + N   AK+ W ++C  K
Sbjct: 383  RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 442

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            QEGGLGIK L   N+ +  K +WR      SLW+ WV  Y +R  S W+ N  +S  SW 
Sbjct: 443  QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 502

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            W+KLL  R+  +     ++ +G++T  W+DNW
Sbjct: 503  WKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNW 534


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  221 bits (562), Expect = 3e-55
 Identities = 111/272 (40%), Positives = 164/272 (60%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD+++F  G  RSVE V N  ++F+  SGL  +  K+ ++ + + 
Sbjct: 832  HPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVS 891

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
            +     I+       G LPV+YLG PLL+  +T +D  PL++++ S+I  W +R LS+AG
Sbjct: 892  ELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAG 951

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL LI+SV+ S+  FW S + LP   I E+EK   AFLW+G + N   AK+ W ++C  K
Sbjct: 952  RLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLK 1011

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            QEGGLGIK L   N+ +  K +WR      SLW+ WV  Y +R  S W+ N  +S  SW 
Sbjct: 1012 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 1071

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            W+KLL+ R+  +     ++ +G++T  W+DNW
Sbjct: 1072 WKKLLNYRDVAKSMCKVEIKSGSSTSFWYDNW 1103


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  220 bits (561), Expect = 4e-55
 Identities = 111/272 (40%), Positives = 162/272 (59%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C+ + LTHLCFADD+++F  G   S+E V N  + F+  SGLQ +  K+ I+ +G+ 
Sbjct: 987  HPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVS 1046

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                   +       G LPV+YLG+PLL+  +T +D  PLIE + ++I  W +R LS+AG
Sbjct: 1047 ASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAG 1106

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL L++SV+ SI  FW S + LP   I E+EK   AFLW+G   N   AK+ W ++C PK
Sbjct: 1107 RLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPK 1166

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            +EGGLGIK L   N+ +  K +WR      SLW+ W+  + +R  + W+ N  +S  SW 
Sbjct: 1167 KEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWM 1226

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            W+KLL  RE  +     +V NG++T  W+D+W
Sbjct: 1227 WKKLLKYRELAKSMHKVEVRNGSSTSFWYDHW 1258


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  219 bits (559), Expect = 8e-55
 Identities = 114/272 (41%), Positives = 158/272 (58%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD++I + G  RSV+ +   +  F+  SGL+ N  KT ++ +G+ 
Sbjct: 607  HPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLKINMEKTTLYTAGVS 666

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
                  ++         LPV+YLG+PL++  LT  D  PL E+I +RI  W SR+LSFAG
Sbjct: 667  DHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAG 726

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RL LI SVL+S   FW S F LP   + E+     AFLW+G + N   AKV+WD +C PK
Sbjct: 727  RLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELNRRKAKVSWDDICKPK 786

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
            Q GGLG++ L   N  +V K +WR   +  SLW+KW     L+ +S W++   +S  SW 
Sbjct: 787  Q-GGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLKPNSSLGSWM 845

Query: 729  WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
            W+K+L  RE  +P    +V NG  T  W DNW
Sbjct: 846  WKKMLKYRETAKPFSRVEVNNGARTSFWFDNW 877


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score =  218 bits (554), Expect = 3e-54
 Identities = 105/272 (38%), Positives = 158/272 (58%), Gaps = 1/272 (0%)
 Frame = +3

Query: 12  HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
           H  C  + LTHL FADD+++ S G  RS+E + +    F+  S L+ +  K+ ++ +G+ 
Sbjct: 20  HPRCKQIGLTHLSFADDLMVLSDGKVRSIEGIVDVFDTFAKCSDLKISMEKSTVYLAGLS 79

Query: 192 KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
             T Q ++       G LPV+YLG+PL++   + +D +PLI+ I  +I  W +RFLS+ G
Sbjct: 80  HTTRQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKICSWSARFLSYTG 139

Query: 372 RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
           RL LI S+L+SI  FW   F LPR  I E++K   A+LW+G + N S AK+ W  VC PK
Sbjct: 140 RLNLISSILWSICNFWMGAFRLPRDCIREIDKMCSAYLWSGGELNTSKAKIAWAFVCKPK 199

Query: 552 QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SWS 728
           +EGGLG++ L+  N+    K +WR      SLW+KW+ +  L+    W +    S  SW 
Sbjct: 200 EEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTSLGSWM 259

Query: 729 WRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
           WRK+L  R+  R     ++ NG  T  W+D+W
Sbjct: 260 WRKILKFRDIARTLCKVEINNGAQTSFWYDDW 291


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  216 bits (549), Expect = 1e-53
 Identities = 104/263 (39%), Positives = 158/263 (60%)
 Frame = +3

Query: 36   LTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMDKGTCQAIV 215
            ++HL FADDV+IF  G   S+  +  TL +F++ SGL+ N  K++++ +G+++    A  
Sbjct: 692  ISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANA 751

Query: 216  HLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAGRLQLIHSV 395
                   G LP++YLG+PL++  L  ++  PL+E+I++R + W+++ LSFAGR+QLI SV
Sbjct: 752  AYG-FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSV 810

Query: 396  LFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPKQEGGLGIK 575
            +F    FW S F+LP+  I  +E     FLW+G      G KV+W  +CLPK EGGLG++
Sbjct: 811  IFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLR 870

Query: 576  DLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCSWSWRKLLHIRE 755
             L  WN+    + +WR FV   SLW  W H + L   S W +    S SW+W++LL +R 
Sbjct: 871  RLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRP 930

Query: 756  QVRPHIIHKVGNGTNTLLWHDNW 824
                 ++ KVGNG     W+DNW
Sbjct: 931  LAHQFLVCKVGNGLKADYWYDNW 953


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  216 bits (549), Expect = 1e-53
 Identities = 116/273 (42%), Positives = 162/273 (59%), Gaps = 2/273 (0%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHL FADD++I + G  RS+E +      FS  SGL+ +  K+ IF +G+ 
Sbjct: 243  HPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLS 302

Query: 192  KGTCQAIVHLTRCKE-GNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFA 368
              T +A +H     E G LP++YLG+PL++  L+  D  PLIE+I  RI  W SRFLSFA
Sbjct: 303  S-TSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFA 361

Query: 369  GRLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLP 548
            GR  LI S+++S   FW S F LPR  I E+EK   +FLW+GT+ N   AK++W+ VC P
Sbjct: 362  GRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKP 421

Query: 549  KQEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC-SW 725
            K EGGLG++ L+  N+    K +WR      SLW+KWV    L+ +  W +   A+  SW
Sbjct: 422  KSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENANLGSW 481

Query: 726  SWRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
             W+K+L  R   +     +VGNG +T  W D+W
Sbjct: 482  IWKKILKYRGVAKRFCKAEVGNGESTSFWFDDW 514


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score =  214 bits (546), Expect = 2e-53
 Identities = 116/274 (42%), Positives = 164/274 (59%)
 Frame = +3

Query: 3   YRSHRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFS 182
           ++ H+ C+ VRLTHL FADD++IF      S+  +  T+++       +A+ L  N+ FS
Sbjct: 162 FQFHQFCEMVRLTHLTFADDLMIFCAADNYSMSFLKETIKSS------KASWLAANMGFS 215

Query: 183 GMDKGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLS 362
                             G+L ++YLG+PLLS  L  SDC PLI+ I+SRI+ W +R LS
Sbjct: 216 -----------------IGHLLIRYLGLPLLSRRLRSSDCDPLIQCITSRIRSWSARVLS 258

Query: 363 FAGRLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVC 542
           FA  LQL+  VL S+QV+W+SVF+LP +V  +V+K LR++LW G +    GAKV WD VC
Sbjct: 259 FASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVC 318

Query: 543 LPKQEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCS 722
           LP  EGGL I D   WN+A+  K LW   V + SLW+ WV AY L+G S+W I+  A  S
Sbjct: 319 LPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAGAGRS 378

Query: 723 WSWRKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
           W +R +L  R+ ++ H+  K+GN     +  D W
Sbjct: 379 WCFRAILRKRDILKAHVEMKLGNVRKCRMLLDAW 412


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score =  212 bits (539), Expect = 2e-52
 Identities = 108/271 (39%), Positives = 151/271 (55%)
 Frame = +3

Query: 12  HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
           H  C    +THL FADD+L+F  GS  S+  + + L  F   SGL  N  KT +   G +
Sbjct: 231 HPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGN 290

Query: 192 KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
               + +       +G+LPV+YLGVPL+S  +   D  PL++RI+SR   W +R LSFAG
Sbjct: 291 FERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAG 350

Query: 372 RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
           RLQL+ SV++S   FW+S+FILP + + ++E+   AFLW+G   +   AK++WD VC  K
Sbjct: 351 RLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLWSGAPNSAREAKISWDIVCSSK 410

Query: 552 QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCSWSW 731
           + GGLG+K L  WN+    K +W  F  + SLW+ WV                    W W
Sbjct: 411 ESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSWVR-------------------WVW 451

Query: 732 RKLLHIREQVRPHIIHKVGNGTNTLLWHDNW 824
           RKL  +RE  RP +I +VG+G     W DNW
Sbjct: 452 RKLCKLREVARPFVICEVGSGITARFWQDNW 482


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  209 bits (531), Expect = 1e-51
 Identities = 99/253 (39%), Positives = 151/253 (59%)
 Frame = +3

Query: 3    YRSHRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFS 182
            +  H  C+ + +THL FADD+L+F      S++ ++   Q FS  SGL A+  K+NI+F 
Sbjct: 672  FNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFC 731

Query: 183  GMDKGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLS 362
            G+D  T + +      + G LP +YLGVPL S  LTY+ C PL+E I++R + W+++ LS
Sbjct: 732  GVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLS 791

Query: 363  FAGRLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVC 542
            +AGRLQLI S+L S+Q +W+ +F L ++VI  VEK  R FLWTG       A V W T+ 
Sbjct: 792  YAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQ 851

Query: 543  LPKQEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASCS 722
             PK  GG  + +++ WN AA+ K LW        LW++W+H+Y ++   I  +N     +
Sbjct: 852  RPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTT 911

Query: 723  WSWRKLLHIREQV 761
            W  RK++  R+ +
Sbjct: 912  WILRKIVKARDHL 924


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  207 bits (528), Expect = 3e-51
 Identities = 100/252 (39%), Positives = 157/252 (62%), Gaps = 1/252 (0%)
 Frame = +3

Query: 3    YRSHRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFS 182
            +  H  C+ ++LTHL FADD+L+F+     S+  +     +FS  SGLQA+  K+ I+F 
Sbjct: 675  FNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFG 734

Query: 183  GMDKGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLS 362
            G+     + +    +   G+LP +YLGVPL S  L +S C PLI++I++R + W++  LS
Sbjct: 735  GVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLS 794

Query: 363  FAGRLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGT-DTNFSGAKVNWDTV 539
            +AGRLQL+ ++L+S+Q +W  +F LP+++I  VE   R FLWTGT DT++  A V WD +
Sbjct: 795  YAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYK-APVAWDFL 853

Query: 540  CLPKQEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLRGDSIWNINTPASC 719
              PK  GGL + ++ +WN+AA+ K LW        LW++WV+AY ++  +I N+   ++ 
Sbjct: 854  QQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNT 913

Query: 720  SWSWRKLLHIRE 755
            SW  RK+   RE
Sbjct: 914  SWILRKIFESRE 925


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  206 bits (523), Expect = 1e-50
 Identities = 102/223 (45%), Positives = 143/223 (64%)
 Frame = +3

Query: 12   HRVCDWVRLTHLCFADDVLIFSHGSFRSVEVVHNTLQNFSAISGLQANPLKTNIFFSGMD 191
            H  C  + LTHLCFADD+++FS GS  S+E V    ++F+A SGL  +  K+ +F + + 
Sbjct: 945  HPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASIS 1004

Query: 192  KGTCQAIVHLTRCKEGNLPVKYLGVPLLSTLLTYSDCIPLIERISSRIKVWLSRFLSFAG 371
              TC +I+       G+LPV+YLG+PL++  +T +DC+PL+E+I SRI  W +RFLS+AG
Sbjct: 1005 SETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAG 1064

Query: 372  RLQLIHSVLFSIQVFWSSVFILPRRVILEVEKQLRAFLWTGTDTNFSGAKVNWDTVCLPK 551
            RLQL++SV+ S+  FW S F LPR  I E+E+   AFLW+GTD N   AKV W  VC PK
Sbjct: 1065 RLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPK 1124

Query: 552  QEGGLGIKDLQIWNEAAVAKNLWRCFVDTKSLWIKWVHAYRLR 680
             EGGLG++ L   N+    K +WR      SLW+ W+    +R
Sbjct: 1125 SEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIR 1167