BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00027409
         (576 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   108   2e-35
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   108   8e-35
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   108   8e-35
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   107   1e-34
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   104   2e-34
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     107   4e-34
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   149   5e-34
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   106   5e-34
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   105   7e-34
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   105   7e-34
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   109   7e-34
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           105   9e-34
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   103   2e-33
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     106   3e-33
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   103   3e-33
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   106   4e-33
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     106   4e-33
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                102   4e-33
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   103   4e-33
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               102   4e-33

>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  108 bits (270), Expect(2) = 2e-35
 Identities = 52/100 (52%), Positives = 71/100 (71%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P+ A+D KT  +VWS  P ++Y  L +FGC  Y  V  SKL+PR
Sbjct: 581 FWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSP-ANYSDLRVFGCIAYAHVDNSKLEPR 639

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
           A K IF+G+  GVK ++LW PE KK+V+SR+V F++SVML
Sbjct: 640 AIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML 679



 Score = 67.0 bits (162), Expect(2) = 2e-35
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG D+     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RCML
Sbjct: 513 ERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCML 572

Query: 393 SQS 385
           S +
Sbjct: 573 SNA 575


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  108 bits (271), Expect(2) = 8e-35
 Identities = 52/100 (52%), Positives = 70/100 (70%)
 Frame = -2

Query: 368  FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
            FWAE +S A ++IN  P+ A+D KT  EVWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 827  FWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPR 885

Query: 188  AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
            A K IF+G+  GVK ++LW PE KK+V+SR+V F++SVML
Sbjct: 886  AIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML 925



 Score = 64.3 bits (155), Expect(2) = 8e-35
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RC+L
Sbjct: 759 ERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLL 818

Query: 393 SQS 385
           S +
Sbjct: 819 SNA 821


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  108 bits (271), Expect(2) = 8e-35
 Identities = 52/100 (52%), Positives = 70/100 (70%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P+ A+D KT  EVWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 620 FWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPR 678

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
           A K IF+G+  GVK ++LW PE KK+V+SR+V F++SVML
Sbjct: 679 AIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML 718



 Score = 64.3 bits (155), Expect(2) = 8e-35
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RC+L
Sbjct: 552 ERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLL 611

Query: 393 SQS 385
           S +
Sbjct: 612 SNA 614


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  107 bits (266), Expect(2) = 1e-34
 Identities = 51/100 (51%), Positives = 70/100 (70%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  S A ++IN  P+ A+D KT  E+WS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 559 FWAEAASTACYLINRSPSYAIDKKTPIEMWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPR 617

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
           A K IF+G+  GVKA++LW PE +K+V+SR+V FN++VML
Sbjct: 618 AIKCIFLGYPSGVKAYKLWCPETQKVVISRNVIFNETVML 657



 Score = 65.5 bits (158), Expect(2) = 1e-34
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++RH+T S T  QNGV   MNR ++ K RCML
Sbjct: 491 ERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCML 550

Query: 393 SQS 385
           S +
Sbjct: 551 SNA 553


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  104 bits (259), Expect(2) = 2e-34
 Identities = 50/105 (47%), Positives = 66/105 (62%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  + A ++IN  P+  L+ KT  EVWS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 613 FWAEAANTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQLRVFGCTAYAHVDNGKLEPR 671

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIP 54
           A K +F+G+  GVK ++LWNPE  K  + R V FNKSVM   ++P
Sbjct: 672 AIKCLFLGYGSGVKRYKLWNPETNKTFMRRSVVFNKSVMFNDSLP 716



 Score = 67.4 bits (163), Expect(2) = 2e-34
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+++K LR+DNGG++  D     C+ EG++RH T   T  QNGVA  MNR ++ K RCML
Sbjct: 545 EKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCML 604

Query: 393 SQS 385
           S +
Sbjct: 605 SNA 607


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  107 bits (266), Expect(2) = 4e-34
 Identities = 50/100 (50%), Positives = 69/100 (69%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P+ A+D KT  EVWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 529 FWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPR 587

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
             K IF+G+  GVK ++LW PE KK+V+SR+V F++S+ML
Sbjct: 588 VIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIML 627



 Score = 63.9 bits (154), Expect(2) = 4e-34
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG +      +  C+SEG++RH+T   T  QNGVA  MNR ++ K RCML
Sbjct: 461 ERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCML 520

Query: 393 SQS 385
           S +
Sbjct: 521 SNA 523


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  149 bits (376), Expect = 5e-34
 Identities = 77/142 (54%), Positives = 97/142 (68%), Gaps = 5/142 (3%)
 Frame = -2

Query: 416  LIRFVACY-PNLD*KNAFWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHI 240
            L+  V C   N +    FWAE ++YA  ++N LP+SA+DGKT  EVWS +P +DYDSLH+
Sbjct: 581  LVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSLHV 640

Query: 239  FGCHIYFQVKESKLDPRAKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*T 60
            FG   Y+ V ESKLDPRAKKA+FMGF+ GVK +RLW  E KK ++SRDVTF++S MLK  
Sbjct: 641  FGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKKTIISRDVTFDESAMLKKV 700

Query: 59   IPEKENQNPNSYE----QVEFE 6
             PE  +  P   E    QVEFE
Sbjct: 701  NPEGADSTPQQVECARKQVEFE 722



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = -1

Query: 567 KIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCMLSQ 388
           KIK LR+DNGG+YK D   K+CQ  G+IRHFT   T  QNGV+  MN+ LV+KVRCMLS 
Sbjct: 532 KIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIRKTPQQNGVSERMNKILVEKVRCMLSN 591

Query: 387 S 385
           +
Sbjct: 592 A 592


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  106 bits (264), Expect(2) = 5e-34
 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  S A ++IN  P+  L+ KT  EVWS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 612 FWAEAASTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQLKVFGCTAYAHVDNGKLEPR 670

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIPEK---ENQNPNSYEQ 18
           A K +F+G+  GVK ++LWNPE  K  +SR V FN+SVM   ++P +   E +    + Q
Sbjct: 671 AVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQRMHMQ 730

Query: 17  VE 12
           VE
Sbjct: 731 VE 732



 Score = 64.3 bits (155), Expect(2) = 5e-34
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNGG++        C+ EG++RH T   T  QNGVA  MNR ++ + RCML
Sbjct: 544 ERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCML 603

Query: 393 SQS 385
           S +
Sbjct: 604 SHA 606


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  105 bits (263), Expect(2) = 7e-34
 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  S A ++IN  P+  L+ KT  EVWS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 612 FWAEAASTACYLINRSPSIPLNKKTPIEVWSGTP-ADYSQLKVFGCTAYAHVDNGKLEPR 670

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIPEK---ENQNPNSYEQ 18
           A K +F+G+  GVK ++LWNPE  K  +SR V FN+SVM   ++P +   E +    + Q
Sbjct: 671 AVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQRMHMQ 730

Query: 17  VE 12
           VE
Sbjct: 731 VE 732



 Score = 64.3 bits (155), Expect(2) = 7e-34
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNGG++        C+ EG++RH T   T  QNGVA  MNR ++ + RCML
Sbjct: 544 ERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCML 603

Query: 393 SQS 385
           S +
Sbjct: 604 SHA 606


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  105 bits (263), Expect(2) = 7e-34
 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  S A ++IN  P+  L+ KT  EVWS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 612 FWAEAASTACYLINRSPSIPLNKKTPIEVWSGTP-ADYSQLKVFGCTAYAHVDNGKLEPR 670

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIPEK---ENQNPNSYEQ 18
           A K +F+G+  GVK ++LWNPE  K  +SR V FN+SVM   ++P +   E +    + Q
Sbjct: 671 AVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPEKELQRMHMQ 730

Query: 17  VE 12
           VE
Sbjct: 731 VE 732



 Score = 64.3 bits (155), Expect(2) = 7e-34
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNGG++        C+ EG++RH T   T  QNGVA  MNR ++ + RCML
Sbjct: 544 ERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCML 603

Query: 393 SQS 385
           S +
Sbjct: 604 SHA 606


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  109 bits (273), Expect(2) = 7e-34
 Identities = 51/123 (41%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P + +  KT  E+WS +  +DY +L  FGC  Y+ V E KL+PR
Sbjct: 598 FWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKA-ADYSNLKAFGCTAYYHVSEGKLEPR 656

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TI-PEKENQNPNSYEQVE 12
           AKK +F+G+ +GVK FR+W+P  K++++SR+V F++S +L+  + P   ++  +  +QVE
Sbjct: 657 AKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVE 716

Query: 11  FEI 3
           F++
Sbjct: 717 FQV 719



 Score = 60.5 bits (145), Expect(2) = 7e-34
 Identities = 29/62 (46%), Positives = 41/62 (66%)
 Frame = -1

Query: 570 EKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCMLS 391
           +KIKRLR+DNG ++      + C+ EG+ RH T   T  QNGVA  MN+ L+++ RCMLS
Sbjct: 531 KKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLS 590

Query: 390 QS 385
            +
Sbjct: 591 NA 592


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  105 bits (261), Expect(2) = 9e-34
 Identities = 50/100 (50%), Positives = 68/100 (68%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P+ A+D KT  EVWS  P + Y  L +F C  Y  V   KL+PR
Sbjct: 441 FWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSP-AKYSDLRVFSCTAYAHVDNGKLEPR 499

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
           A K IF+G+  GVK ++LW PE KK+V++R+V F++SVML
Sbjct: 500 AIKCIFLGYPSGVKGYKLWCPETKKVVINRNVVFHESVML 539



 Score = 64.7 bits (156), Expect(2) = 9e-34
 Identities = 30/63 (47%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR DNG ++     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RCML
Sbjct: 373 ERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCML 432

Query: 393 SQS 385
           S +
Sbjct: 433 SNA 435


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  103 bits (257), Expect(2) = 2e-33
 Identities = 49/105 (46%), Positives = 67/105 (63%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  + A ++IN  P+  L+ KT  E+WS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 613 FWAEAANTACYLINRSPSIPLNKKTPIEIWSGMP-ADYSQLRVFGCTAYAHVDNEKLEPR 671

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIP 54
           A K +F+G+  GVK ++LWNPE  K  +SR V FN+SVM   ++P
Sbjct: 672 AIKCLFLGYGLGVKGYKLWNPETNKTFMSRSVVFNESVMFNDSLP 716



 Score = 65.1 bits (157), Expect(2) = 2e-33
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+++K LR+DN G++  D     C+ EG++RH T   T  QNGVA  MNR ++ K RCML
Sbjct: 545 EKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCML 604

Query: 393 SQS 385
           S +
Sbjct: 605 SNA 607


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  106 bits (265), Expect(2) = 3e-33
 Identities = 51/100 (51%), Positives = 69/100 (69%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P  A+D KT  EVWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 592 FWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSP-TNYSDLRVFGCTAYAHVDNGKLEPR 650

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
           A K IF+G+  GVK ++LW PE KK+V+SR+V F++SV+L
Sbjct: 651 AIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVIL 690



 Score = 61.2 bits (147), Expect(2) = 3e-33
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++ H+TA  T  QN VA  MNR ++ K RCML
Sbjct: 524 ERKVKILRTDNGMEFCSKIFKSYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCML 583

Query: 393 SQS 385
           S +
Sbjct: 584 SNA 586


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  103 bits (258), Expect(2) = 3e-33
 Identities = 49/105 (46%), Positives = 67/105 (63%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE    A ++IN  P+ +L+ KT  EVWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 508 FWAEAAKTACYLINRSPSISLNKKTPIEVWSGMP-ANYSQLRVFGCTAYAHVNNGKLEPR 566

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIP 54
           A K +F+G+  GVK ++LWNPE  K  +SR V FN+SVM   ++P
Sbjct: 567 AIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVVFNESVMFNDSLP 611



 Score = 63.9 bits (154), Expect(2) = 3e-33
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+++K LR+DNGG +  D     C+ EG++ H T   T  QNGVA  MNR ++ K RCML
Sbjct: 440 EKEVKVLRTDNGGGFCSDAFDDYCRKEGIVMHHTIPYTPQQNGVAERMNRTIISKARCML 499

Query: 393 SQS 385
           S +
Sbjct: 500 SNA 502


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  106 bits (265), Expect(2) = 4e-33
 Identities = 52/107 (48%), Positives = 70/107 (65%)
 Frame = -2

Query: 389 NLD*KNAFWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVK 210
           N D    FWAE +S   ++IN  P+ A D KT  EVWS  P ++Y  L +FGC  Y  V 
Sbjct: 648 NADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVD 706

Query: 209 ESKLDPRAKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
             KL+PRA K IF+G+  GVK ++LW PE KK+V+SR+V F++SV+L
Sbjct: 707 NGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVIL 753



 Score = 60.8 bits (146), Expect(2) = 4e-33
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+K+K LR+DNG ++     +  C+SEG++ H+T   T  QNGVA  MN  ++ K RCML
Sbjct: 587 EKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCML 646

Query: 393 SQS 385
           S +
Sbjct: 647 SNA 649


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  106 bits (265), Expect(2) = 4e-33
 Identities = 52/107 (48%), Positives = 70/107 (65%)
 Frame = -2

Query: 389 NLD*KNAFWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVK 210
           N D    FWAE +S   ++IN  P+ A D KT  EVWS  P ++Y  L +FGC  Y  V 
Sbjct: 648 NADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVD 706

Query: 209 ESKLDPRAKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
             KL+PRA K IF+G+  GVK ++LW PE KK+V+SR+V F++SV+L
Sbjct: 707 NGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVIL 753



 Score = 60.8 bits (146), Expect(2) = 4e-33
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+K+K LR+DNG ++     +  C+SEG++ H+T   T  QNGVA  MN  ++ K RCML
Sbjct: 587 EKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCML 646

Query: 393 SQS 385
           S +
Sbjct: 647 SNA 649


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  102 bits (255), Expect(2) = 4e-33
 Identities = 50/100 (50%), Positives = 67/100 (67%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P  A+D KT  +VWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 605 FWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPR 663

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
             K IF+G+  GVK ++LW PE KK+V+SR V F++SVML
Sbjct: 664 TIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFHESVML 703



 Score = 64.7 bits (156), Expect(2) = 4e-33
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RCML
Sbjct: 537 ERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCML 596

Query: 393 SQS 385
           S +
Sbjct: 597 SNA 599


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score =  103 bits (258), Expect(2) = 4e-33
 Identities = 49/105 (46%), Positives = 67/105 (63%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE  + A ++IN  P+  L+ KT  EVWS  P +DY  L +FGC  Y  V   KL+PR
Sbjct: 553 FWAEVANTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQLRVFGCTAYAHVDNGKLEPR 611

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVMLK*TIP 54
           A K +F+G+  GVK ++LWNP+  K  +SR V FN+SVM   ++P
Sbjct: 612 AIKCLFLGYGSGVKGYKLWNPKTNKTFMSRSVVFNESVMFNDSLP 656



 Score = 63.5 bits (153), Expect(2) = 4e-33
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E+++K LR+D+GG++  D     C+ EG++RH T   T  QNGVA  MNR ++   RCML
Sbjct: 485 EKEVKVLRTDSGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCML 544

Query: 393 SQS 385
           S +
Sbjct: 545 SNA 547


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  102 bits (255), Expect(2) = 4e-33
 Identities = 50/100 (50%), Positives = 67/100 (67%)
 Frame = -2

Query: 368 FWAEFLSYASFIINTLPTSALDGKTLKEVWSRQPISDYDSLHIFGCHIYFQVKESKLDPR 189
           FWAE +S A ++IN  P  A+D KT  +VWS  P ++Y  L +FGC  Y  V   KL+PR
Sbjct: 437 FWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSP-ANYSDLKVFGCTAYAHVDNGKLEPR 495

Query: 188 AKKAIFMGFTEGVKAFRLWNPEPKKIVLSRDVTFNKSVML 69
             K IF+G+  GVK ++LW PE KK+V+SR V F++SVML
Sbjct: 496 TIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFHESVML 535



 Score = 64.7 bits (156), Expect(2) = 4e-33
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = -1

Query: 573 EEKIKRLRSDNGGDYKLDTLQKICQSEGMIRHFTASITS*QNGVAGWMNRNLVDKVRCML 394
           E K+K LR+DNG ++     +  C+SEG++RH+T   T  QNGVA  MNR ++ K RCML
Sbjct: 369 ERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCML 428

Query: 393 SQS 385
           S +
Sbjct: 429 SNA 431