BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00027314
         (1080 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_006381622.1| pentatricopeptide repeat-containing family p...   439   e-121
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...   430   e-118
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...   424   e-116
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein...   422   e-115
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]     419   e-115
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-114
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]     414   e-113
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...   410   e-112
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...   403   e-110
ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prun...   398   e-108
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...   386   e-105
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus...   381   e-103
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...   375   e-101
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps...   374   e-101
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...   372   e-100
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                      372   e-100

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Vitis vinifera]
          Length = 641

 Score =  444 bits (1142), Expect = e-122
 Identities = 210/307 (68%), Positives = 253/307 (82%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPDVITYN+LING C+ NEVDRG  LL+E+ +K+D+SPDVVTYTS+ISGYCKLG+ME+
Sbjct: 267  GCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEK 326

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS++F+ M SSGIKPN  TFN+LI+GFGK G++ SA  +YE+ML  G  PD+ITFTSLID
Sbjct: 327  ASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLID 386

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             +CR G+V++ L LWHE+  RNL PNEYT+AIL  ALCKENRL EA  FLR LK  +++ 
Sbjct: 387  GHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVA 446

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            QPFMYNP+IDGFCKAGNVD AN ++AEMEEK+CK DK+TYTILIIGHCMKGR+ EAISIF
Sbjct: 447  QPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIF 506

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML  GCAPD+IT+ SLISCLLKAGMPNEA  I + A E  NLG+ S KR +PL TNT+
Sbjct: 507  NRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGLKSLKRNVPLRTNTD 566

Query: 180  IPVAVLT 160
            IPVA ++
Sbjct: 567  IPVAFMS 573



 Score =  126 bits (316), Expect = 2e-26
 Identities = 76/272 (27%), Positives = 136/272 (50%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            G SPD      L++    A + +  R  +      D +   +V Y  +++   +  +++E
Sbjct: 167  GHSPDASVLGFLVSSATDAGKFNIARTWV------DGVEFSLVVYNKLLNQLVRGNQVDE 220

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A   F E        ++ +FN+LI G  + G +  A  ++ +M  FG  PDVIT+ +LI+
Sbjct: 221  AVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLIN 280

Query: 720  AYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI 544
             +CR  +VD+G  L  E+  +N L P+  TY  +I   CK  ++++A     ++    + 
Sbjct: 281  GFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIK 340

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P  F +N +I+GF K G++  A  +  EM    C  D +T+T LI GHC  G++  ++ +
Sbjct: 341  PNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKL 400

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEA 268
            +  + A+  +P+  T   L + L K    +EA
Sbjct: 401  WHELNARNLSPNEYTFAILTNALCKENRLHEA 432



 Score =  107 bits (266), Expect = 1e-20
 Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 31/254 (12%)
 Frame = -1

Query: 951 TYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAG--NIAS------ 796
           TY+ ++    ++G  E A  V+D M   G  P+      L+     AG  NIA       
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGV 198

Query: 795 --AVTIYEKMLS------------------FGFHP--DVITFTSLIDAYCRAGQVDQGLM 682
             ++ +Y K+L+                   G H   D  +F  LI   CR G+VD+   
Sbjct: 199 EFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFE 258

Query: 681 LWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMN-VIPQPFMYNPIIDGF 505
           L++EM+     P+  TY  LI   C+ N +   HD L+ L   N + P    Y  II G+
Sbjct: 259 LFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGY 318

Query: 504 CKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDN 325
           CK G ++ A+ +   M     K +  T+ ILI G    G M  A ++++ ML  GC PD 
Sbjct: 319 CKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDI 378

Query: 324 ITVNSLISCLLKAG 283
           IT  SLI    + G
Sbjct: 379 ITFTSLIDGHCRTG 392


>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550336330|gb|ERP59419.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 511

 Score =  439 bits (1130), Expect = e-121
 Identities = 212/305 (69%), Positives = 248/305 (81%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PDV+TYN+LINGLCKANEV RG  L +EIQ++ D SPD+VTYTS+ISG+CK G+M+E
Sbjct: 207  GCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKE 266

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +F+EM  SGI+PN ITFNVLIDGFGK GNIA A  +Y KM  F    DV+TFTSLID
Sbjct: 267  ASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLID 326

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCRAGQV+ GL  W+ MK RN+ P  YTYA+LI ALCKENRL EA DFL  +K  ++IP
Sbjct: 327  GYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIP 386

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PFMYNP+IDGFCKAGNVD  N ++ EMEEK+C  DK+T+TILIIGHC+KGRMFEAI+IF
Sbjct: 387  KPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIF 446

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              MLA  CAPDNITVNSLISCLLKAGMPNEA  I+K ALE  NLG+SS ++ IPL TNT+
Sbjct: 447  NRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFEKAIPLRTNTD 506

Query: 180  IPVAV 166
            IPVAV
Sbjct: 507  IPVAV 511



 Score =  145 bits (365), Expect = 4e-32
 Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            G  PD      L+  + +A++ D  + LL E+Q K+ +  +   Y +++S   K  ++ E
Sbjct: 103  GHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKE-VRINSFVYNNLLSVLVKQNQVHE 161

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A  +F E  +    P+T TFN+LI G  + G +  A  +++ M SFG  PDV+T+ +LI+
Sbjct: 162  AIYLFKEYLAMQ-SPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLIN 220

Query: 720  AYCRAGQVDQGLMLWHEMK-RRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI 544
              C+A +V +G  L+ E++ R +  P+  TY  +I   CK  +++EA +    +    + 
Sbjct: 221  GLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQ 280

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P    +N +IDGF K GN+  A A+  +M    C  D +T+T LI G+C  G++   +  
Sbjct: 281  PNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKF 340

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEA 268
            + +M  +  +P   T   LI+ L K    NEA
Sbjct: 341  WNVMKTRNVSPTVYTYAVLINALCKENRLNEA 372


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Citrus sinensis]
            gi|568841566|ref|XP_006474729.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score =  430 bits (1105), Expect = e-118
 Identities = 206/304 (67%), Positives = 251/304 (82%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPD++TYN+LI+GLC+ NEV RG  LL+E++ K + SPDVVTYTSVISGYCKLG+M++
Sbjct: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A+ +++EM S GIKP+ +TFNVLIDGFGK GN+ SA  + E+MLSFG+ PDV+TF+SLID
Sbjct: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR GQ++QGL L  EMK +NL PN YT+ ILI ALCKENRL +A  FL+ LK  +++P
Sbjct: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PFMYNP+IDGFCKAGNVD AN +VAEMEEK+CK DK+T+TILIIGHCMKGRM EAISIF
Sbjct: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML  GCAPD+ITVNSLISCLLK GMPNEA  I + A E LNL + S K+ +PL TNT+
Sbjct: 531  NKMLTIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDLNLQLPSWKKAVPLRTNTD 590

Query: 180  IPVA 169
            IPVA
Sbjct: 591  IPVA 594



 Score =  129 bits (323), Expect = 3e-27
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1044 INGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSG 865
            ++   +A + D  +GLL + +   +++     Y S+++   K    +EA  +F E     
Sbjct: 198  VSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256

Query: 864  IKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGL 685
             +P+T TFN+LI G  + G +  A   +  M SFG  PD++T+ +LI   CR  +V +G 
Sbjct: 257  SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316

Query: 684  MLWHEMKRRNLF-PNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDG 508
             L  E+K ++ F P+  TY  +I   CK  ++ +A      +    + P    +N +IDG
Sbjct: 317  ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376

Query: 507  FCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPD 328
            F K GN+  A  +   M       D +T++ LI G+C  G++ + + +   M  K  +P+
Sbjct: 377  FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436

Query: 327  NITVNSLISCLLKAGMPNEATHIKK 253
              T   LI+ L K    N+A    K
Sbjct: 437  VYTFTILINALCKENRLNDARRFLK 461



 Score =  106 bits (265), Expect = 1e-20
 Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 36/282 (12%)
 Frame = -1

Query: 1008 GRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPN-------- 853
            G   LE  +    ++    TY  V+   C++G  +   VVFD M S G  PN        
Sbjct: 139  GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198

Query: 852  ---------------------------TITFNVLIDGFGKAGNIASAVTIYEKMLSFGFH 754
                                       T  +N L++   K  N   AV ++++       
Sbjct: 199  SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258

Query: 753  PDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDF 574
            PD  TF  LI    R G+V +    +++M      P+  TY  LI  LC+ N +   H+ 
Sbjct: 259  PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318

Query: 573  LRHLKGMNVI-PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHC 397
            L+ +K  +   P    Y  +I G+CK G +D A  +  EM     K   +T+ +LI G  
Sbjct: 319  LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378

Query: 396  MKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNE 271
              G M  A  + + ML+ G  PD +T +SLI    + G  N+
Sbjct: 379  KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
 Frame = -1

Query: 846 TFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEM 667
           T+N+++    + G   S   +++ M S G  P+       + +  RAG+ D    L  + 
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217

Query: 666 KRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNV 487
           +   +  + + Y  L+ AL K+N   EA    +    +   P  + +N +I G  + G V
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277

Query: 486 DMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKG-CAPDNITVNS 310
             A     +M    C  D +TY  LI G C    +     + K +  K   +PD +T  S
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337

Query: 309 LISCLLKAGMPNEATHI 259
           +IS   K G  ++AT I
Sbjct: 338 VISGYCKLGKMDKATGI 354


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
            gi|557556032|gb|ESR66046.1| hypothetical protein
            CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score =  424 bits (1091), Expect = e-116
 Identities = 204/304 (67%), Positives = 249/304 (81%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPD++TYN+LI+GLC+ NEV RG  LL+E++ K +  PDVVTYTSVISGYCKLG+M++
Sbjct: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDK 350

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A+ +++EM S GIKP+ +TFNVLIDGFGK GN+ SA  + E+MLS G+ PDV+TF+SLID
Sbjct: 351  ATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLID 410

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR GQ++QGL L  EMK +NL PN YT+AILI ALCKENRL +A  FL+ LK  +++P
Sbjct: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLKWNDLVP 470

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PFMYNP+IDGFCKAGNVD AN +VAEMEEK+CK DK+T+TILIIGHCMKGRM EAISIF
Sbjct: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML  GCAPD+ITVNSLISCLLK GMPNEA  I + A E  NL + S K+ +PL TNT+
Sbjct: 531  NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTD 590

Query: 180  IPVA 169
            IPVA
Sbjct: 591  IPVA 594



 Score =  127 bits (318), Expect = 1e-26
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1044 INGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSG 865
            ++   +A + D  +GLL + +   +++     Y S+++   K    +EA  +F E     
Sbjct: 198  VSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256

Query: 864  IKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGL 685
             +P+T TFN+LI G  + G +  A   +  M SFG  PD++T+ +LI   CR  +V +G 
Sbjct: 257  SQPDTWTFNILIRGLCRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316

Query: 684  MLWHEMKRRNLF-PNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDG 508
             L  E+K ++ F P+  TY  +I   CK  ++ +A      +    + P    +N +IDG
Sbjct: 317  ELLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDG 376

Query: 507  FCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPD 328
            F K GN+  A  +   M       D +T++ LI G+C  G++ + + +   M  K  +P+
Sbjct: 377  FGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436

Query: 327  NITVNSLISCLLKAGMPNEATHIKK 253
              T   LI+ L K    N+A    K
Sbjct: 437  VYTFAILINALCKENRLNDARRFLK 461



 Score =  111 bits (278), Expect = 5e-22
 Identities = 76/282 (26%), Positives = 117/282 (41%), Gaps = 36/282 (12%)
 Frame = -1

Query: 1008 GRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPN-------- 853
            G   LE  +    ++    TY  V+   C++G  +   VVFD M S G  PN        
Sbjct: 139  GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198

Query: 852  ---------------------------TITFNVLIDGFGKAGNIASAVTIYEKMLSFGFH 754
                                       T  +N L++   K  N   AV ++++       
Sbjct: 199  SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258

Query: 753  PDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDF 574
            PD  TF  LI   CR G+V +    +++M      P+  TY  LI  LC+ N +   H+ 
Sbjct: 259  PDTWTFNILIRGLCRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318

Query: 573  LRHLK-GMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHC 397
            L+ +K     +P    Y  +I G+CK G +D A ++  EM     K   +T+ +LI G  
Sbjct: 319  LKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFG 378

Query: 396  MKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNE 271
              G M  A  + + ML+ G  PD +T +SLI    + G  N+
Sbjct: 379  KVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQ 420



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 1/197 (0%)
 Frame = -1

Query: 846 TFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEM 667
           T+N+++    + G   S   +++ M S G  P+       + +  RAG+ D    L  + 
Sbjct: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217

Query: 666 KRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNV 487
           +   +  + + Y  L+ AL K+N   EA    +    +   P  + +N +I G C+ G V
Sbjct: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIRGLCRIGEV 277

Query: 486 DMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKG-CAPDNITVNS 310
             A     +M    C  D +TY  LI G C    +     + K +  K    PD +T  S
Sbjct: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTS 337

Query: 309 LISCLLKAGMPNEATHI 259
           +IS   K G  ++AT I
Sbjct: 338 VISGYCKLGKMDKATSI 354


>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
            repeat superfamily protein, putative [Theobroma cacao]
          Length = 592

 Score =  422 bits (1085), Expect = e-115
 Identities = 201/304 (66%), Positives = 243/304 (79%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD++TYN++INGLCK NEVDRG  LL ++Q++DD SPDVVTYTSVISGYCKLG+M+E
Sbjct: 288  GCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDE 347

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +F EM SSG  P  +TFNVLIDGFGK G++ SA ++YE+M SFG   DV+TFTSLID
Sbjct: 348  ASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTFTSLID 407

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR G V+Q L LW+ MK R+L PN YT+AI I ALCKENRL EA  FLR L+  N++P
Sbjct: 408  GYCRIGDVNQSLQLWNTMKGRDLSPNVYTFAITINALCKENRLHEARGFLRELQCRNIVP 467

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PF++NP+IDGFCKAGN+D AN +VAEMEEK+C  DK+T+TILIIGHCMKGRMFEAISIF
Sbjct: 468  KPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQCHPDKVTFTILIIGHCMKGRMFEAISIF 527

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML+ GC PD++TVNSLISCLLKAGMP+EA+ I K A E + LG S  +   PL  N  
Sbjct: 528  NKMLSVGCTPDDVTVNSLISCLLKAGMPSEASRITKMASEDMKLGSSLLENNSPLRINRG 587

Query: 180  IPVA 169
            +PVA
Sbjct: 588  VPVA 591



 Score =  123 bits (309), Expect = 1e-25
 Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 1/243 (0%)
 Frame = -1

Query: 1008 GRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLI 829
            G   LE  +   +I+    TY  ++  +C +G  + A +VFD M   G  P+T     +I
Sbjct: 136  GLKFLEFSRVNFNIAHSFWTYNLLMRSFCHMGLHDSAKLVFDYMRIDGHLPDTTILGFMI 195

Query: 828  DGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLF 649
              FG+AG    A  +   + S      +    +L++   +  ++++ + L+ E    N +
Sbjct: 196  SSFGRAGEFGMAKKLLADVQSDEVVISIFALNNLLNMMVKQNKLEEAVSLYKENLGSNFY 255

Query: 648  PNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAV 469
            P+ +T+ ILI  LC+  ++ +A +    +      P    YN II+G CK   VD  + +
Sbjct: 256  PDAWTFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKL 315

Query: 468  VAEMEEK-KCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLL 292
            + +++ +  C  D +TYT +I G+C  G+M EA ++F  M++ G  P  +T N LI    
Sbjct: 316  LNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFG 375

Query: 291  KAG 283
            K G
Sbjct: 376  KVG 378


>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
          Length = 732

 Score =  419 bits (1078), Expect = e-115
 Identities = 203/305 (66%), Positives = 246/305 (80%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPDVITYN+LI+GLC+ NEVDRG  LL E+Q+K  +SPDVVT+TSVISGYCKLG+M+E
Sbjct: 429  GCSPDVITYNTLISGLCRNNEVDRGFDLLREVQSKSKLSPDVVTFTSVISGYCKLGQMKE 488

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +FDEM + GIKPNT TFN LIDGFGKAG++ASA+T + KML  G+HPDV++FTSLID
Sbjct: 489  ASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFAKMLFHGYHPDVVSFTSLID 548

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR G ++QGL LW EM  R++ PN YT+++LI ALC+ NRL EA DFL+ L   N+IP
Sbjct: 549  GYCRVGNLNQGLKLWREMNERSVRPNGYTFSVLIHALCRNNRLHEARDFLKQLSCTNIIP 608

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PF+YNPI+DGFCKAGNVD AN +VA ME K CK DK+T+TILIIG+CMKGRM EAI +F
Sbjct: 609  EPFIYNPIVDGFCKAGNVDEANMIVAGMEGKGCKPDKVTFTILIIGNCMKGRMLEAIGVF 668

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              M A GCAP++ T N LISCLLKAGMPNEA  IKK+A+E LNLG +   R   L+TN  
Sbjct: 669  NKMKAVGCAPESRTANCLISCLLKAGMPNEAFSIKKSAIEDLNLG-TVCLRSDHLSTNAG 727

Query: 180  IPVAV 166
            IP+AV
Sbjct: 728  IPMAV 732



 Score =  224 bits (570), Expect = 6e-56
 Identities = 117/271 (43%), Positives = 161/271 (59%), Gaps = 1/271 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPD++TYN+LI+GLCK N+VDRG  LL E+Q++ ++SPD VT+TSVISGYCKLGRM E
Sbjct: 288  GCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSE 347

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +F EM +SGIKP   TFN LIDG  KAG++ASAV ++ + ++  F PD  TF  LI 
Sbjct: 348  ASSLFAEMINSGIKPAAATFNALIDGHAKAGDMASAVCLFRRNMTLHFQPDTWTFNILIR 407

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI- 544
              C  G+V      + +M +    P+  TY  LI  LC+ N +    D LR ++  + + 
Sbjct: 408  GLCGVGKVHTAFEFFKDMGKFGCSPDVITYNTLISGLCRNNEVDRGFDLLREVQSKSKLS 467

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P    +  +I G+CK G +  A+ +  EM     K +  T+  LI G    G M  AI+ 
Sbjct: 468  PDVVTFTSVISGYCKLGQMKEASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITF 527

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNE 271
            F  ML  G  PD ++  SLI    + G  N+
Sbjct: 528  FAKMLFHGYHPDVVSFTSLIDGYCRVGNLNQ 558



 Score =  128 bits (322), Expect = 4e-27
 Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            G  PD      L+    +   +D    LL+E++ +D I    + Y ++++   K  ++ E
Sbjct: 183  GHLPDSSIVEFLLCSHAQVGRLDLVEKLLDELR-RDGIIVSSIVYNNLLNVLVKQNKVCE 241

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A  +F +  +S  +P+T TFN+LI G     ++ +A     +M   G  PD++T+ +LI 
Sbjct: 242  AVCLFRKHMNSRFRPSTWTFNILIQGLCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLIS 301

Query: 720  AYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI 544
              C+   VD+G  L  E++ R+ L P+  T+  +I   CK  R+ EA      +    + 
Sbjct: 302  GLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSEASSLFAEMINSGIK 361

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P    +N +IDG  KAG++  A  +         + D  T+ ILI G C  G++  A   
Sbjct: 362  PAAATFNALIDGHAKAGDMASAVCLFRRNMTLHFQPDTWTFNILIRGLCGVGKVHTAFEF 421

Query: 363  FKMMLAKGCAPDNITVNSLISCLLK 289
            FK M   GC+PD IT N+LIS L +
Sbjct: 422  FKDMGKFGCSPDVITYNTLISGLCR 446



 Score =  114 bits (285), Expect = 7e-23
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDE 880
            +YN L+  LC+    D  + + +  ++ D   PD      ++  + ++GR++    + DE
Sbjct: 155  SYNYLMRSLCQMGLHDSAKFVFDCFKS-DGHLPDSSIVEFLLCSHAQVGRLDLVEKLLDE 213

Query: 879  MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQ 700
            +   GI  ++I +N L++   K   +  AV ++ K ++  F P   TF  LI   C    
Sbjct: 214  LRRDGIIVSSIVYNNLLNVLVKQNKVCEAVCLFRKHMNSRFRPSTWTFNILIQGLCGIRD 273

Query: 699  VDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI-PQPFMYN 523
            V       +EM +    P+  TY  LI  LCK N +    + LR L+  + + P    + 
Sbjct: 274  VYTAFEFLNEMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFT 333

Query: 522  PIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAK 343
             +I G+CK G +  A+++ AEM     K    T+  LI GH   G M  A+ +F+  +  
Sbjct: 334  SVISGYCKLGRMSEASSLFAEMINSGIKPAAATFNALIDGHAKAGDMASAVCLFRRNMTL 393

Query: 342  GCAPDNITVNSLISCLLKAGMPNEA 268
               PD  T N LI  L   G  + A
Sbjct: 394  HFQPDTWTFNILIRGLCGVGKVHTA 418



 Score =  102 bits (253), Expect = 4e-19
 Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
 Frame = -1

Query: 972 DISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASA 793
           +++  + +Y  ++   C++G  + A  VFD   S G  P++     L+    + G +   
Sbjct: 148 NVNHTLSSYNYLMRSLCQMGLHDSAKFVFDCFKSDGHLPDSSIVEFLLCSHAQVGRLDLV 207

Query: 792 VTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGA 613
             + +++   G     I + +L++   +  +V + + L+ +       P+ +T+ ILI  
Sbjct: 208 EKLLDELRRDGIIVSSIVYNNLLNVLVKQNKVCEAVCLFRKHMNSRFRPSTWTFNILIQG 267

Query: 612 LCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEK-KCKH 436
           LC    +  A +FL  +  +   P    YN +I G CK  +VD    ++ E++ + +   
Sbjct: 268 LCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSP 327

Query: 435 DKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAG 283
           D +T+T +I G+C  GRM EA S+F  M+  G  P   T N+LI    KAG
Sbjct: 328 DAVTFTSVISGYCKLGRMSEASSLFAEMINSGIKPAAATFNALIDGHAKAG 378


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  419 bits (1077), Expect = e-114
 Identities = 203/306 (66%), Positives = 245/306 (80%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD+++YN+LING C+ NE+ +G  LL+E      +SPDV+TYTS+ISGYCKLG M+ 
Sbjct: 244  GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +FDEM SSGIKPN  TFNVLIDGFGK GN+ SA+ +YEKML  G  PDV+TFTSLID
Sbjct: 304  ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR G+V+QGL LW EMK RNL PN YTYA+LI ALCKENR++EA +FLRHLK   V+P
Sbjct: 364  GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PF+YNP+IDGFCKAG VD AN +VAEM+EKKC+ DK+T+TILIIG+CMKGRM EAIS F
Sbjct: 424  KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLT-TNT 184
              M+   C PD IT+NSLISCLLKAGMPNEA+ IK+ AL+ LNLG+SS     PLT  ++
Sbjct: 484  YKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGS--PLTRKSS 541

Query: 183  NIPVAV 166
             +PVAV
Sbjct: 542  RVPVAV 547



 Score =  137 bits (345), Expect = 8e-30
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDE 880
            TY+ L+  LCK    D  + ++ +    D I PD      ++S Y ++G+++ A    +E
Sbjct: 111  TYDLLMRNLCKVGLNDSAK-IVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 879  MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQ 700
            +   GIK +   +N L++   K   +  AV ++ + L   F PDV +F  LI   CR G+
Sbjct: 170  VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 699  VDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRH---LKGMNVIPQPFM 529
            +D+    +  M     FP+  +Y  LI   C+ N + + HD L+    +KG  V P    
Sbjct: 230  IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKG--VSPDVIT 287

Query: 528  YNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMML 349
            Y  II G+CK G++  A+ +  EM     K +  T+ +LI G    G M  A+ +++ ML
Sbjct: 288  YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 348  AKGCAPDNITVNSLISCLLKAGMPNE 271
              GC PD +T  SLI    + G  N+
Sbjct: 348  LLGCLPDVVTFTSLIDGYCREGEVNQ 373


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Cucumis sativus]
          Length = 548

 Score =  417 bits (1073), Expect = e-114
 Identities = 202/306 (66%), Positives = 244/306 (79%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD+++YN+LING C+ NE+ +G  LL+E      +SPDV+TYTS+ISGYCKLG M+ 
Sbjct: 244  GCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKA 303

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +FDEM SSGIKPN  TFNVLIDGFGK GN+ SA+ +YEKML  G  PDV+TFTSLID
Sbjct: 304  ASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID 363

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR G+V+QGL LW EMK RNL PN YTYA+LI ALCKENR++EA +FLRHLK   V+P
Sbjct: 364  GYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVP 423

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PF+YNP+IDGFCKAG VD AN +VAEM+EKKC+ DK+T+TILIIG+CMKGRM EAIS F
Sbjct: 424  KPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTF 483

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLT-TNT 184
              M+   C PD IT+NSLISCLLKAGMPNEA+ IK+ AL+ LNLG+SS     PLT  ++
Sbjct: 484  YKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGS--PLTRKSS 541

Query: 183  NIPVAV 166
             +P AV
Sbjct: 542  RVPAAV 547



 Score =  137 bits (345), Expect = 8e-30
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDE 880
            TY+ L+  LCK    D  + ++ +    D I PD      ++S Y ++G+++ A    +E
Sbjct: 111  TYDLLMRNLCKVGLNDSAK-IVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169

Query: 879  MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQ 700
            +   GIK +   +N L++   K   +  AV ++ + L   F PDV +F  LI   CR G+
Sbjct: 170  VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229

Query: 699  VDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRH---LKGMNVIPQPFM 529
            +D+    +  M     FP+  +Y  LI   C+ N + + HD L+    +KG  V P    
Sbjct: 230  IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKG--VSPDVIT 287

Query: 528  YNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMML 349
            Y  II G+CK G++  A+ +  EM     K +  T+ +LI G    G M  A+ +++ ML
Sbjct: 288  YTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKML 347

Query: 348  AKGCAPDNITVNSLISCLLKAGMPNE 271
              GC PD +T  SLI    + G  N+
Sbjct: 348  LLGCLPDVVTFTSLIDGYCREGEVNQ 373


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score =  414 bits (1063), Expect = e-113
 Identities = 198/304 (65%), Positives = 242/304 (79%)
 Frame = -1

Query: 1077 CSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEA 898
            CSPDV+TYN+LI+GLC+ NEVDRG  LL E+Q + D SP+V T+TSVI GYCKLGRMEEA
Sbjct: 268  CSPDVVTYNTLISGLCRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEA 327

Query: 897  SVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDA 718
            S +FDEM  SG +P T+TFNVLID F K G++ASA+ +YEKML  G+ PDV+TFTSLID 
Sbjct: 328  SALFDEMMDSGTRPTTVTFNVLIDAFSKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDG 387

Query: 717  YCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQ 538
            YCR GQ+++GL LW EM  RN+ PN YTY+++I ALCK NRL EA D LR L   N++P+
Sbjct: 388  YCRVGQLNRGLKLWCEMSVRNVSPNGYTYSVVIHALCKVNRLHEARDLLRQLNCTNIVPK 447

Query: 537  PFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFK 358
            PFMYNP+IDGFCKAGNVD AN +VAEMEEK+C  DKMT+TILI+G+CMKGRM +AI +F 
Sbjct: 448  PFMYNPVIDGFCKAGNVDEANMIVAEMEEKRCNPDKMTFTILILGNCMKGRMVDAIGVFY 507

Query: 357  MMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTNI 178
             MLA GCAPD ITV+ L+SCLLKAGMPNEA HIK+T ++ LN+G+ SS R   +     I
Sbjct: 508  KMLAVGCAPDKITVHCLMSCLLKAGMPNEAFHIKETVMKSLNVGM-SSLRSNHMRAIAEI 566

Query: 177  PVAV 166
            P+AV
Sbjct: 567  PMAV 570



 Score =  129 bits (324), Expect = 2e-27
 Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            G SPD  T   L+    K  ++D    LLEEI+A   +      Y+S+ +   K  ++ E
Sbjct: 167  GHSPDNSTIEFLVCVFAKVGKLDSCEKLLEEIRASKFV------YSSLFNVLVKNNKVYE 220

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A  +F +   S   P+T TFN+LI G    G + SA   +  M  F   PDV+T+ +LI 
Sbjct: 221  AVCLFRKQIGSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLIS 280

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLF-PNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI 544
              CR  +VD+G  L  E++ R  F PN  T+  +I   CK  R++EA      +      
Sbjct: 281  GLCRTNEVDRGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTR 340

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P    +N +ID F K G++  A A+  +M     + D +T+T LI G+C  G++   + +
Sbjct: 341  PTTVTFNVLIDAFSKVGDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKL 400

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEA 268
            +  M  +  +P+  T + +I  L K    +EA
Sbjct: 401  WCEMSVRNVSPNGYTYSVVIHALCKVNRLHEA 432



 Score =  108 bits (270), Expect = 4e-21
 Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
 Frame = -1

Query: 1023 NEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTIT 844
            N  + G    E  +A   ++    TY  +I   C++G  + A  VFD M   G  P+  T
Sbjct: 115  NNPNLGLKFFELSRANLSVNHSFSTYNLLIRSLCQMGFHDSAKFVFDCMRIDGHSPDNST 174

Query: 843  FNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMK 664
               L+  F K G + S   + E++ +  F      ++SL +   +  +V + + L+ +  
Sbjct: 175  IEFLVCVFAKVGKLDSCEKLLEEIRASKF-----VYSSLFNVLVKNNKVYEAVCLFRKQI 229

Query: 663  RRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVD 484
              +  P+ +T+ ILIG LC    +  A +F   +      P    YN +I G C+   VD
Sbjct: 230  GSHFVPDTWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVD 289

Query: 483  MANAVVAEMEEK-KCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSL 307
                ++ E++ +     +  T+T +I+G+C  GRM EA ++F  M+  G  P  +T N L
Sbjct: 290  RGCDLLREVQLRGDFSPNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPTTVTFNVL 349

Query: 306  ISCLLKAG 283
            I    K G
Sbjct: 350  IDAFSKVG 357


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score =  410 bits (1055), Expect = e-112
 Identities = 192/304 (63%), Positives = 244/304 (80%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PDV+TYN+LI+GLCKANE+DR   LL+E+Q+++D SPDV+TYTS+ISG+ KLG++E 
Sbjct: 228  GCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEA 287

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            ASV+F+EM  SGI+P  +TFNVLIDGFGK GN+ +A  ++EKM S+   PDV+TFTSLID
Sbjct: 288  ASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLID 347

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR G +  GL +W  MK RN+ PN YTY+++I ALCK+NR+ EA D LR LK  +V P
Sbjct: 348  GYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFP 407

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PF+YNP+IDGFCKAGNVD AN +V EMEEK+C+ DK+T+TILIIGHCMKGRM EA+ IF
Sbjct: 408  KPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIF 467

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
            K MLA GCAPDNIT++SL++CLLKAG P+EA HI +TA E LNL  SS ++  P+   T+
Sbjct: 468  KKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSLRKTFPMRVKTD 527

Query: 180  IPVA 169
            I VA
Sbjct: 528  ISVA 531



 Score =  114 bits (285), Expect = 7e-23
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 1/260 (0%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVFDE 880
            TY  LI  LC+    D    ++  +++   +  D      +++ + + G+ + A  +  E
Sbjct: 95   TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLI-DSRVLGFLVTSFAQAGKFDLAKKLIIE 153

Query: 879  MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQ 700
            +     + ++  +N L++   K G +  A+ ++++ L+F   P+  TF  LI   CR G+
Sbjct: 154  VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 699  VDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMN-VIPQPFMYN 523
            V++G  L++ M+     P+  TY  LI  LCK N L  A D L+ ++  N   P    Y 
Sbjct: 214  VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 522  PIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAK 343
             II GF K G ++ A+ +  EM     +   +T+ +LI G    G M  A ++ + M + 
Sbjct: 274  SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 342  GCAPDNITVNSLISCLLKAG 283
             C PD +T  SLI    + G
Sbjct: 334  SCIPDVVTFTSLIDGYCRTG 353



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 42/163 (25%), Positives = 70/163 (42%)
 Frame = -1

Query: 741 TFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHL 562
           T+  LI + C+ G  D   M+   M+      +      L+ +  +  +   A   +  +
Sbjct: 95  TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154

Query: 561 KGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRM 382
           +G       F+YN +++   K G V  A  +  E        +  T+ ILI G C  G +
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214

Query: 381 FEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKK 253
            +   +F  M + GC PD +T N+LIS L KA   + A  + K
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLK 257


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Fragaria vesca subsp. vesca]
          Length = 583

 Score =  403 bits (1036), Expect = e-110
 Identities = 195/305 (63%), Positives = 240/305 (78%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSP+V+TYN+LI+GLC+A+EVDRG  LL E+Q + ++SPDV+T+TSVISGYCKLGRMEE
Sbjct: 280  GCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRMEE 339

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS +FDEM   G+KP  +TFN LIDG+GKAG+++SA ++YE ML  G   DVITFTSLID
Sbjct: 340  ASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLYESMLFHGHCADVITFTSLID 399

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCRAG ++ GL LWHEM  +N+ P+ YT+++LI ALCK NRL EA D LR LKG NV+P
Sbjct: 400  GYCRAGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLLRELKGSNVVP 459

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            + F+YNP+IDG CKAGN+D AN +VAEMEEKKC  D++T+TILI+G+ MKGRM EAI  F
Sbjct: 460  KSFLYNPVIDGLCKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGNSMKGRMSEAIGNF 519

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML+ GCAPD IT++SLISCL KAGMP+EA  IKK A E LN+G  S  R   L  N  
Sbjct: 520  SKMLSIGCAPDKITIDSLISCLSKAGMPSEAGRIKKIAYEDLNMGAPSMGRPPHLRAN-E 578

Query: 180  IPVAV 166
            IPVAV
Sbjct: 579  IPVAV 583



 Score =  125 bits (314), Expect = 3e-26
 Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
 Frame = -1

Query: 1065 VITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVF 886
            V TY+ L+  LC+    D  + L+ +    D +SP+      ++S   ++GR + A  + 
Sbjct: 145  VWTYHYLLRSLCQMGLQDSAK-LVFDYMRTDGLSPNESVLEFLVSSCAQMGRSDLAEKIL 203

Query: 885  DEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRA 706
            DE+  S +  ++  +N L +   K   +  AV ++ K +     PD  TF  LI   CR 
Sbjct: 204  DEVHCSVVGLSSFVYNNLFNVLVKLNRVDEAVCLFRKYVGSYCCPDSWTFNILIRGLCRT 263

Query: 705  GQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI-PQPFM 529
            G VD+GL  + +M+     PN  TY  LI  LC+ + +    D LR ++  + + P    
Sbjct: 264  GAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVIT 323

Query: 528  YNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMML 349
            +  +I G+CK G ++ A+A+  EM     K   +T+  LI G+   G M  A S+++ ML
Sbjct: 324  FTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLYESML 383

Query: 348  AKGCAPDNITVNSLISCLLKAGMPNEATHI 259
              G   D IT  SLI    +AG  N    +
Sbjct: 384  FHGHCADVITFTSLIDGYCRAGHLNHGLQL 413



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 45/161 (27%), Positives = 73/161 (45%)
 Frame = -1

Query: 768 SFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQ 589
           S   +  V T+  L+ + C+ G  D   +++  M+   L PNE     L+ +  +  R  
Sbjct: 138 SLNVNHGVWTYHYLLRSLCQMGLQDSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMGRSD 197

Query: 588 EAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILI 409
            A   L  +    V    F+YN + +   K   VD A  +  +     C  D  T+ ILI
Sbjct: 198 LAEKILDEVHCSVVGLSSFVYNNLFNVLVKLNRVDEAVCLFRKYVGSYCCPDSWTFNILI 257

Query: 408 IGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKA 286
            G C  G + + +  F  M + GC+P+ +T N+LIS L +A
Sbjct: 258 RGLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRA 298


>ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
            gi|462400356|gb|EMJ06024.1| hypothetical protein
            PRUPE_ppa004064mg [Prunus persica]
          Length = 532

 Score =  398 bits (1023), Expect = e-108
 Identities = 196/305 (64%), Positives = 238/305 (78%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD++TYN+LI+GLC+ANEVDRG  LL+E+Q++ ++SPDV+T+TSVISGYCKLG+MEE
Sbjct: 251  GCYPDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGKMEE 310

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            ASV+FDEM +SG+ P ++TFN LIDGFGK+GN+ SA  +YEKML  G+ PDVITFTSLID
Sbjct: 311  ASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTSLID 370

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCRAG++ QGL LW EM  +N+ P+ YT+++LI ALC+ENRLQEAH             
Sbjct: 371  GYCRAGKLSQGLKLWQEMNAKNVSPSAYTFSVLINALCRENRLQEAH------------- 417

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
                      GFCKAGNVD AN +VAEMEEK+C  DK+T+TILI+G+CMKGRM EAIS F
Sbjct: 418  ----------GFCKAGNVDEANLIVAEMEEKRCSPDKVTFTILILGNCMKGRMSEAISNF 467

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
            K MLA GCAPDNITV+SLISCL+KAGMPNEA HIKK A E LNLG+S S+R   L  N  
Sbjct: 468  KKMLAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKIACEDLNLGMSPSRRADHLRANAK 527

Query: 180  IPVAV 166
            I VAV
Sbjct: 528  ITVAV 532



 Score =  142 bits (359), Expect = 2e-31
 Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
 Frame = -1

Query: 1065 VITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEASVVF 886
            V TYN L+  LC+    D  + L+ +    D  +PD      ++S Y ++G++  A  + 
Sbjct: 156  VWTYNFLLRSLCQIGLQDSAK-LVFDYMRSDGHTPDDSIAELLVSSYAQMGKLNNAEKLL 214

Query: 885  DEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAYCRA 706
            DE     +  ++ TFN+LI G  + G I  A   +  M SFG +PD++T+ +LI   CRA
Sbjct: 215  DE-----VHCDSWTFNILIRGLCRIGEIDKAFEFFSDMESFGCYPDIVTYNTLISGLCRA 269

Query: 705  GQVDQGLMLWHEMKRR-NLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFM 529
             +VD+G  L  E++ R  L P+  T+  +I   CK  +++EA      +    V P    
Sbjct: 270  NEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMNNSGVGPTSVT 329

Query: 528  YNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMML 349
            +N +IDGF K+GN+  A A+  +M     + D +T+T LI G+C  G++ + + +++ M 
Sbjct: 330  FNALIDGFGKSGNMISARAMYEKMLFHGYRPDVITFTSLIDGYCRAGKLSQGLKLWQEMN 389

Query: 348  AKGCAPDNITVNSLISCLLKAGMPNEA 268
            AK  +P   T + LI+ L +     EA
Sbjct: 390  AKNVSPSAYTFSVLINALCRENRLQEA 416


>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Solanum tuberosum]
            gi|565370447|ref|XP_006351832.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score =  393 bits (1010), Expect = e-107
 Identities = 185/306 (60%), Positives = 238/306 (77%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD +TYN+LINGLC   +V+R RGLL  ++ +D +SPDVVTYTSVI+GYCKLGRM+E
Sbjct: 245  GCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDE 304

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A  + DEMT+ GI PN +TFN+LI+GFGK G++ SA+ +Y +M + G+ PDV+TFTSLID
Sbjct: 305  AINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLID 364

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGM-NVI 544
             YCR G++DQGL LW EM  RNL PN YT++ILI AL KENRL EA + LR LK   +++
Sbjct: 365  GYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSRDDIV 424

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            PQPF+YNP++DGFCKAGN+  AN + AEME + C HDK+T+TILI+GHCMKGRM EA++I
Sbjct: 425  PQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHCMKGRMLEAMAI 484

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNT 184
            F  ML+ GC PD+ITV+ L SCLLKAGM  EA  ++ T  + LN  +SSSK+ +P  T+ 
Sbjct: 485  FDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKVRLTPSKDLNPDLSSSKQSVPFRTSL 544

Query: 183  NIPVAV 166
            +IPVAV
Sbjct: 545  DIPVAV 550



 Score =  110 bits (275), Expect = 1e-21
 Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
 Frame = -1

Query: 948 YTSVISGYCKLGRMEEASVVFDE--MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEK 775
           + S++S   K  R++EA   F    + S  + P+T TFN +I G  + G +  A   +  
Sbjct: 181 HNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFND 240

Query: 774 MLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAILIGALCKEN 598
           M SFG  PD +T+ +LI+  C  GQV++   L   ++ ++ L P+  TY  +I   CK  
Sbjct: 241 MGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLG 300

Query: 597 RLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYT 418
           R+ EA + +  +    + P    +N +I+GF K G++  A  +   M       D +T+T
Sbjct: 301 RMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFT 360

Query: 417 ILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHI 259
            LI G+C  G + + + ++  M  +  +P+  T + LIS L K    NEA  +
Sbjct: 361 SLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEAREL 413


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            [Solanum lycopersicum]
          Length = 550

 Score =  386 bits (992), Expect = e-105
 Identities = 182/306 (59%), Positives = 234/306 (76%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPD +TYN+LINGLC   +V+R +GLL  +Q +D +SPDVVTYTS+ISGYCKL RM+E
Sbjct: 245  GCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDE 304

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A  + DEM + GI PN +TFN+LI+GFGK G++ SA+ +Y KM + G+ PDV+TFTSLID
Sbjct: 305  AINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLID 364

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGM-NVI 544
             YCR G++DQGL LW +M  RNL PN YT+++LI AL KENRL EA + LR LK   +++
Sbjct: 365  GYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIV 424

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            PQPF+YNP++DGFCKAGN+  AN + AEME K C HDK+T+TILI+GHCMKGRM EA++I
Sbjct: 425  PQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAI 484

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNT 184
            F  ML+ GC PD+IT++ L SCLLKAGM  EA  ++    + LN  +S SK  IP  T+ 
Sbjct: 485  FDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLSPSKLFIPFRTSL 544

Query: 183  NIPVAV 166
            +IPVAV
Sbjct: 545  DIPVAV 550


>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
            isoform X1 [Glycine max] gi|571448762|ref|XP_006577947.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g06000-like isoform X2 [Glycine max]
            gi|571448764|ref|XP_006577948.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X3 [Glycine max]
            gi|571448766|ref|XP_006577949.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At2g06000-like isoform X4 [Glycine max]
          Length = 510

 Score =  384 bits (986), Expect = e-104
 Identities = 183/305 (60%), Positives = 230/305 (75%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PDVITYN+LI+GLC+ NEVDR R LL+E+    + +PDVV+YT++ISGYCK  +MEE
Sbjct: 206  GCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEE 265

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
             +++F EM  SG  PNT TFN LI GFGK G++ASA+ +YEKML  G  PDV TFTSLI+
Sbjct: 266  GNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLIN 325

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             Y R GQV Q + +WH+M  +N+    YT+++L+  LC  NRL +A D LR L   +++P
Sbjct: 326  GYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVP 385

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            QPF+YNP+IDG+CK+GNVD AN +VAEME  +CK DK+T+TILIIGHCMKGRM EAI IF
Sbjct: 386  QPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIF 445

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              MLA GCAPD ITVN+L SCLLKAGMP EA  +KK   + L LG++SSK+    TTN +
Sbjct: 446  HKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQNLTLGITSSKKSYHETTNES 505

Query: 180  IPVAV 166
            IPVAV
Sbjct: 506  IPVAV 510



 Score =  115 bits (288), Expect = 3e-23
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
 Frame = -1

Query: 1074 SPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEAS 895
            S   +TY+ L+  LC++N     + + + ++    I PD      ++  Y  +GR++ + 
Sbjct: 68   SHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQI-PDNRLLGFLVWSYAIVGRLDVSR 126

Query: 894  VVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDAY 715
             +  ++  + +  N + +N L +   +   +  AV ++ +++   + P   T   L+   
Sbjct: 127  ELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGL 186

Query: 714  CRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRH--LKGMNVIP 541
            CRAG++D+   L ++++     P+  TY  LI  LC+ N +  A   L+   L G    P
Sbjct: 187  CRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNG-EFAP 245

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
                Y  II G+CK   ++  N +  EM       +  T+  LI G    G M  A++++
Sbjct: 246  DVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALY 305

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEA 268
            + ML +GC PD  T  SLI+   + G  ++A
Sbjct: 306  EKMLVQGCVPDVATFTSLINGYFRLGQVHQA 336



 Score =  114 bits (284), Expect = 9e-23
 Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            G  PD      L+        +D  R LL ++Q  +++  + V Y  + +   +  ++ +
Sbjct: 101  GQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQC-NNVGVNAVVYNDLFNVLIRQNKVVD 159

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A V+F E+     KP T T N+L+ G  +AG I  A  +   + SFG  PDVIT+ +LI 
Sbjct: 160  AVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIH 219

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLF-PNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVI 544
              CR  +VD+   L  E+     F P+  +Y  +I   CK ++++E +     +      
Sbjct: 220  GLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTA 279

Query: 543  PQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISI 364
            P  F +N +I GF K G++  A A+  +M  + C  D  T+T LI G+   G++ +A+ +
Sbjct: 280  PNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDM 339

Query: 363  FKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLN 232
            +  M  K       T + L+S L      N   H  +  L  LN
Sbjct: 340  WHKMNDKNIGATLYTFSVLVSGLCN----NNRLHKARDILRLLN 379


>gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus guttatus]
          Length = 552

 Score =  381 bits (978), Expect = e-103
 Identities = 182/305 (59%), Positives = 234/305 (76%), Gaps = 1/305 (0%)
 Frame = -1

Query: 1077 CSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEEA 898
            CSPD++TYN+LINGLC+  +VDR   LL EI+ + + S DVVTYTSVISGYCKLG+ + A
Sbjct: 251  CSPDLVTYNTLINGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAA 310

Query: 897  SVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLIDA 718
            + +F+EM ++GI+PN  TFN +IDGFGK G +ASA  +YE+M + GF PDV+TFTSLID 
Sbjct: 311  AFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDG 370

Query: 717  YCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGM-NVIP 541
            +CR G + QG+ L +EM  + + PN +T+++LI ALCKENRL EA D L  LK   +++P
Sbjct: 371  HCRCGDLGQGIHLLNEMNEKRVSPNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVP 430

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
             PF+YNP+IDG+CKAGNVD ANA+VAEME K C HDKMT+TILI+GHCMKGRMFEAI ++
Sbjct: 431  PPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMY 490

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNTN 181
              ML+ GC PDNIT++SLISCL KAGM  EA  I++ AL  ++   SSSKR  P+  N N
Sbjct: 491  NKMLSVGCVPDNITMSSLISCLRKAGMAREANEIEQKALFSVS---SSSKRSNPVRNNMN 547

Query: 180  IPVAV 166
            + VAV
Sbjct: 548  VTVAV 552



 Score =  116 bits (290), Expect = 2e-23
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 7/278 (2%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLL----EEIQAKDDISPDVVTYTSVISGYCKLG 913
            G  PD    + +++    A +      +L    E    KD++    V Y + +S      
Sbjct: 139  GFLPDSSVLDFVVSSFANAGKFRIAEEILIARAEYCNEKDELVSSFV-YNNFLSMLTNKN 197

Query: 912  RMEEASVVFDE--MTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVIT 739
            R+++A + F    +      P+T +FN+++ G  +A  +  A   ++ M SF   PD++T
Sbjct: 198  RIDDAVLFFKSHILRLKSFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVT 257

Query: 738  FTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNE-YTYAILIGALCKENRLQEAHDFLRHL 562
            + +LI+  CR G+VD+   L  E+K ++ F  +  TY  +I   CK  +   A      +
Sbjct: 258  YNTLINGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEM 317

Query: 561  KGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRM 382
                + P  F +N IIDGF K G V  A+ +   M     + D +T+T LI GHC  G +
Sbjct: 318  INNGIRPNLFTFNAIIDGFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDL 377

Query: 381  FEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEA 268
             + I +   M  K  +P+  T + LIS L K    NEA
Sbjct: 378  GQGIHLLNEMNEKRVSPNVFTFSVLISALCKENRLNEA 415



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 46/256 (17%)
 Frame = -1

Query: 912 RMEEASVVFDEMTSSGIKPNTI----TFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDV 745
           R+    + F     S ++ N I    TF++L+    + G   SA  +Y+ M S GF PD 
Sbjct: 85  RLNNPDLAFTFFRCSRLRLNLIHLEPTFDLLLRSLCQMGRHDSAELVYQYMKSDGFLPDS 144

Query: 744 ITFTSLIDAYCRAG---------------------------------------QVDQGLM 682
                ++ ++  AG                                       ++D  ++
Sbjct: 145 SVLDFVVSSFANAGKFRIAEEILIARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDDAVL 204

Query: 681 LW--HEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDG 508
            +  H ++ ++  P+  ++ I++  LC+ +++ +A +F   ++  +  P    YN +I+G
Sbjct: 205 FFKSHILRLKSFCPDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLING 264

Query: 507 FCKAGNVDMANAVVAEME-EKKCKHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAP 331
            C+ G VD A  ++ E++ + +   D +TYT +I G+C  G+   A  +F+ M+  G  P
Sbjct: 265 LCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRP 324

Query: 330 DNITVNSLISCLLKAG 283
           +  T N++I    K G
Sbjct: 325 NLFTFNAIIDGFGKKG 340


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|42570711|ref|NP_973429.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
            [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330250896|gb|AEC05990.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
            gi|330250897|gb|AEC05991.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  375 bits (962), Expect = e-101
 Identities = 176/299 (58%), Positives = 223/299 (74%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD++TYN+LI G CK+NE+++   + +++++    SPDVVTYTS+ISGYCK G+M E
Sbjct: 236  GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS + D+M   GI P  +TFNVL+DG+ KAG + +A  I  KM+SFG  PDV+TFTSLID
Sbjct: 296  ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR GQV QG  LW EM  R +FPN +TY+ILI ALC ENRL +A + L  L   ++IP
Sbjct: 356  GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            QPFMYNP+IDGFCKAG V+ AN +V EME+KKCK DK+T+TILIIGHCMKGRMFEA+SIF
Sbjct: 416  QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNT 184
              M+A GC+PD ITV+SL+SCLLKAGM  EA H+ + A +G       S  ++PL T T
Sbjct: 476  HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG------QSNNVVPLETKT 528



 Score =  125 bits (313), Expect = 4e-26
 Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPD-------------------------- 958
            TYN L   LCKA   D   G + E    D +SP+                          
Sbjct: 105  TYNLLTRSLCKAGLHDLA-GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163

Query: 957  -------VVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIA 799
                    +   S+++   KL R+E+A  +FDE        +T TFN+LI G    G   
Sbjct: 164  SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223

Query: 798  SAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNL-FPNEYTYAIL 622
             A+ +   M  FG  PD++T+ +LI  +C++ ++++   ++ ++K  ++  P+  TY  +
Sbjct: 224  KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283

Query: 621  IGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKC 442
            I   CK  +++EA   L  +  + + P    +N ++DG+ KAG +  A  +  +M    C
Sbjct: 284  ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343

Query: 441  KHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATH 262
              D +T+T LI G+C  G++ +   +++ M A+G  P+  T + LI+ L      NE   
Sbjct: 344  FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC-----NENRL 398

Query: 261  IKKTALEGLNLGVSSSKRIIP 199
            +K   L    LG  +SK IIP
Sbjct: 399  LKAREL----LGQLASKDIIP 415


>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
            gi|565479514|ref|XP_006297397.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566105|gb|EOA30294.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
            gi|482566106|gb|EOA30295.1| hypothetical protein
            CARUB_v10013421mg [Capsella rubella]
          Length = 535

 Score =  374 bits (959), Expect = e-101
 Identities = 177/297 (59%), Positives = 224/297 (75%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GCSPD++TYN+LI G CK+NE+ +   +L ++++    SPDVVTYTS+ISGYCK G+M+E
Sbjct: 237  GCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 296

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            A ++ D+M   GI P TITFNVL+DG+ KAG + SA  I  KM+SFG  PDV+TFTSLID
Sbjct: 297  AYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIRGKMISFGCFPDVVTFTSLID 356

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCRAGQV+QG  LW EM  + + PNE+TY+ILI ALCKEN L +A + L  L   ++I 
Sbjct: 357  GYCRAGQVNQGFRLWEEMNAKGMLPNEFTYSILINALCKENSLLKARELLGQLASKDIIT 416

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            +PFMYNP+IDGFCKAG V+ AN +V EME+KKCK DK+T+TILIIGHCMKGRMFEA+SIF
Sbjct: 417  KPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 476

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTT 190
              M+A GC+PD ITVNSL+SCLLKAGM  EA H+ + A +      + S  + PL T
Sbjct: 477  HKMVAIGCSPDKITVNSLLSCLLKAGMAEEAYHLNQIARK------AQSNDVAPLET 527



 Score =  126 bits (317), Expect = 1e-26
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPD-------------------------- 958
            TYN L   LCKA   D   G + E    D +SP+                          
Sbjct: 106  TYNVLTRSLCKAGMHDLA-GQMFECMRSDGVSPNSRLLGFLVSSFAEKGKLQFATALLLQ 164

Query: 957  -------VVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIA 799
                    +   S+++   KL R+++A  +FD+        +T TFN+LI G    G   
Sbjct: 165  SYEVERCCMVVNSLLNTLVKLDRVDDAMKLFDKHLRFQCCNDTKTFNILIRGLCSVGKGE 224

Query: 798  SAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAIL 622
             A+ +  +M  FG  PD++T+ +LI  +C++ ++ +   + +++K  +   P+  TY  +
Sbjct: 225  KALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTSM 284

Query: 621  IGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKC 442
            I   CK  ++QEA+  L  + G+ + P    +N ++DG+ KAG +  A  +  +M    C
Sbjct: 285  ISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIRGKMISFGC 344

Query: 441  KHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLK 289
              D +T+T LI G+C  G++ +   +++ M AKG  P+  T + LI+ L K
Sbjct: 345  FPDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNEFTYSILINALCK 395



 Score =  109 bits (273), Expect = 2e-21
 Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
 Frame = -1

Query: 951 TYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKM 772
           TY  +    CK G  + A  +F+ M S G+ PN+     L+  F + G +  A  +   +
Sbjct: 106 TYNVLTRSLCKAGMHDLAGQMFECMRSDGVSPNSRLLGFLVSSFAEKGKLQFATALL--L 163

Query: 771 LSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRL 592
            S+      +   SL++   +  +VD  + L+ +  R     +  T+ ILI  LC   + 
Sbjct: 164 QSYEVERCCMVVNSLLNTLVKLDRVDDAMKLFDKHLRFQCCNDTKTFNILIRGLCSVGKG 223

Query: 591 QEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKK-CKHDKMTYTI 415
           ++A + L  + G    P    YN +I GFCK+  +  AN ++ +++    C  D +TYT 
Sbjct: 224 EKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSPDVVTYTS 283

Query: 414 LIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIK 256
           +I G+C  G+M EA  +   ML  G  P  IT N L+    KAG    A  I+
Sbjct: 284 MISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIR 336


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331650|gb|EFH62069.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 536

 Score =  372 bits (955), Expect = e-100
 Identities = 180/306 (58%), Positives = 229/306 (74%), Gaps = 2/306 (0%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD++TYN+LI G CK+NE+ +   + +++++    SPDVVTYTS+ISGYCK G+M+E
Sbjct: 236  GCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQE 295

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            ASV+ D+M   GI P  +TFNVL+DG+ KAG + +A  I  KM+SFG  PDV+TFTSLID
Sbjct: 296  ASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR GQV+QG  LW EM  R +FPN +TY+ILI ALCKENRL +A + L  L   ++IP
Sbjct: 356  GYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIP 415

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            QPFMYNP+IDGFCKAG V+ A  +V EME+KKCK DK+T+TILIIGHCMKGRMFEA+SIF
Sbjct: 416  QPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEG-LNLGVSSSKRIIPLTTNT 184
              M+A GC+PD ITV+SL+SCLLKAGM  EA H+ + A +G +N G        PL T T
Sbjct: 476  HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQINDGA-------PLETKT 528

Query: 183  -NIPVA 169
             N+ +A
Sbjct: 529  ANVTLA 534



 Score =  124 bits (310), Expect = 9e-26
 Identities = 88/321 (27%), Positives = 146/321 (45%), Gaps = 34/321 (10%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPD-------------------------- 958
            TYN L   LCKA   D   G + E    D ISP+                          
Sbjct: 105  TYNLLTRSLCKAGMHDLA-GQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQ 163

Query: 957  -------VVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIA 799
                    +   S+++   KL R+E+A  +F+E        +T TFN+LI G    G   
Sbjct: 164  SYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAE 223

Query: 798  SAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRN-LFPNEYTYAIL 622
             AV +   M  FG  PD++T+ +LI  +C++ ++ +   ++ ++K  +   P+  TY  +
Sbjct: 224  KAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSM 283

Query: 621  IGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKC 442
            I   CK  ++QEA   L  +  + + P    +N ++DG+ KAG +  A  +  +M    C
Sbjct: 284  ISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGC 343

Query: 441  KHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATH 262
              D +T+T LI G+C  G++ +   +++ M A+G  P+  T + LI+ L K     +A  
Sbjct: 344  FPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARE 403

Query: 261  IKKTALEGLNLGVSSSKRIIP 199
            +         LG  +SK IIP
Sbjct: 404  L---------LGQLASKDIIP 415


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  372 bits (955), Expect = e-100
 Identities = 175/299 (58%), Positives = 222/299 (74%)
 Frame = -1

Query: 1080 GCSPDVITYNSLINGLCKANEVDRGRGLLEEIQAKDDISPDVVTYTSVISGYCKLGRMEE 901
            GC PD++TYN+LI G CK+NE+++   + +++++    SPDVVTYTS+ISGYCK G+M E
Sbjct: 236  GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295

Query: 900  ASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIASAVTIYEKMLSFGFHPDVITFTSLID 721
            AS + D+M   GI P  +TFNVL+DG+ KAG + +A  I  KM+SFG  PDV+TFTSLID
Sbjct: 296  ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355

Query: 720  AYCRAGQVDQGLMLWHEMKRRNLFPNEYTYAILIGALCKENRLQEAHDFLRHLKGMNVIP 541
             YCR GQV QG  LW EM  R +FPN +TY+ILI ALC ENRL +A + L  L   ++IP
Sbjct: 356  GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415

Query: 540  QPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKCKHDKMTYTILIIGHCMKGRMFEAISIF 361
            QPFMYNP+IDGFCKAG V+ AN +V EME+KKCK DK+T+TILIIGHCMKGRMFEA+SIF
Sbjct: 416  QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475

Query: 360  KMMLAKGCAPDNITVNSLISCLLKAGMPNEATHIKKTALEGLNLGVSSSKRIIPLTTNT 184
              M+A GC+PD ITV+SL+SCLLKAGM  EA H+ + A +G       S  ++P  T T
Sbjct: 476  HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG------QSNNVVPPETKT 528



 Score =  125 bits (313), Expect = 4e-26
 Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
 Frame = -1

Query: 1059 TYNSLINGLCKANEVDRGRGLLEEIQAKDDISPD-------------------------- 958
            TYN L   LCKA   D   G + E    D +SP+                          
Sbjct: 105  TYNLLTRSLCKAGLHDLA-GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163

Query: 957  -------VVTYTSVISGYCKLGRMEEASVVFDEMTSSGIKPNTITFNVLIDGFGKAGNIA 799
                    +   S+++   KL R+E+A  +FDE        +T TFN+LI G    G   
Sbjct: 164  SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223

Query: 798  SAVTIYEKMLSFGFHPDVITFTSLIDAYCRAGQVDQGLMLWHEMKRRNL-FPNEYTYAIL 622
             A+ +   M  FG  PD++T+ +LI  +C++ ++++   ++ ++K  ++  P+  TY  +
Sbjct: 224  KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283

Query: 621  IGALCKENRLQEAHDFLRHLKGMNVIPQPFMYNPIIDGFCKAGNVDMANAVVAEMEEKKC 442
            I   CK  +++EA   L  +  + + P    +N ++DG+ KAG +  A  +  +M    C
Sbjct: 284  ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343

Query: 441  KHDKMTYTILIIGHCMKGRMFEAISIFKMMLAKGCAPDNITVNSLISCLLKAGMPNEATH 262
              D +T+T LI G+C  G++ +   +++ M A+G  P+  T + LI+ L      NE   
Sbjct: 344  FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC-----NENRL 398

Query: 261  IKKTALEGLNLGVSSSKRIIP 199
            +K   L    LG  +SK IIP
Sbjct: 399  LKAREL----LGQLASKDIIP 415