BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00013478
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot...   107   2e-21
ref|NP_734031.1| protease cofactor [Beet ringspot virus]              103   2e-20
prf||1507292A polyprotein                                             103   2e-20
sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: F...   103   2e-20
ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj...   103   2e-20
ref|NP_958837.1| NTB [Tomato black ring virus]                         97   2e-18
ref|NP_958814.1| polyprotein [Tomato black ring virus] gi|513164...    97   2e-18
ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus] gi|...    91   2e-16
ref|NP_734047.1| protease cofactor [Grapevine chrome mosaic virus]     91   2e-16

>ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot virus]
           gi|400131550|emb|CCG47847.1| polyprotein p1 [Grapevine
           Anatolian ringspot virus]
          Length = 2243

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFDKRLSEAKNFFLSVLIPTYNASYGGKPIGLS-ETIFSFSS 177
           LFY SN  I+LD FS+Y+N++++L   K+FF + ++   +      P+ LS + +  FS 
Sbjct: 21  LFY-SNLDIDLDNFSFYYNYNRKLKSLKDFFNNRVLSALSTP---APVSLSSQFVEDFSV 76

Query: 178 FLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLE 327
            ++ +L+INP+  +WEETLANWP FPGTSLLD CRTQY+VRRE  EA  E
Sbjct: 77  LILDKLRINPFLHIWEETLANWPIFPGTSLLDFCRTQYEVRREAAEASAE 126


>ref|NP_734031.1| protease cofactor [Beet ringspot virus]
          Length = 565

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFD-KRLSEAKNFFLS-VLIPTYNASYGGKPIGLSETIFSFS 174
           LFYNSN  I LD F +YFNF  K+ +   +FF   VL   Y +    +   L+  +  F 
Sbjct: 27  LFYNSNLDIVLDDFDFYFNFYVKKYNVLLSFFSDRVLSALYTSMSVSEAASLA--MEDFC 84

Query: 175 SFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
              + ELKINP+++LWEETLANWP +PGTSLLD CRTQY++RRE  EA  E+
Sbjct: 85  ELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEIRREAAEASAEI 136


>prf||1507292A polyprotein
          Length = 2264

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFD-KRLSEAKNFFLS-VLIPTYNASYGGKPIGLSETIFSFS 174
           LFYNSN  I LD F +YFNF  K+ +   +FF   VL   Y +    +   L+  +  F 
Sbjct: 27  LFYNSNLDIVLDDFDFYFNFYVKKYNVLLSFFSDRVLSALYTSMSVSEAASLA--MEDFC 84

Query: 175 SFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
              + ELKINP+++LWEETLANWP +PGTSLLD CRTQY++RRE  EA  E+
Sbjct: 85  ELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEIRREAAEASAEI 136


>sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: Full=P1; Contains:
           RecName: Full=P1A protein; Short=1A; AltName:
           Full=Protease cofactor; Contains: RecName: Full=Putative
           ATP-dependent helicase; AltName: Full=1B; AltName:
           Full=Membrane-binding protein; AltName: Full=NTP-binding
           protein; Short=NTB; Contains: RecName: Full=Viral
           genome-linked protein; AltName: Full=1C-VPg; Contains:
           RecName: Full=Picornain 3C-like protease; Short=3C-like
           protease; AltName: Full=1D-PRO; Contains: RecName:
           Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
          Length = 2264

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFD-KRLSEAKNFFLS-VLIPTYNASYGGKPIGLSETIFSFS 174
           LFYNSN  I LD F +YFNF  K+ +   +FF   VL   Y +    +   L+  +  F 
Sbjct: 27  LFYNSNLDIVLDDFDFYFNFYVKKYNVLLSFFSDRVLSALYTSMSVSEAASLA--MEDFC 84

Query: 175 SFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
              + ELKINP+++LWEETLANWP +PGTSLLD CRTQY++RRE  EA  E+
Sbjct: 85  ELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEIRREAAEASAEI 136


>ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj|BAA00234.1|
           polyprotein [Beet ringspot virus]
          Length = 2266

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFD-KRLSEAKNFFLS-VLIPTYNASYGGKPIGLSETIFSFS 174
           LFYNSN  I LD F +YFNF  K+ +   +FF   VL   Y +    +   L+  +  F 
Sbjct: 27  LFYNSNLDIVLDDFDFYFNFYVKKYNVLLSFFSDRVLSALYTSMSVSEAASLA--MEDFC 84

Query: 175 SFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
              + ELKINP+++LWEETLANWP +PGTSLLD CRTQY++RRE  EA  E+
Sbjct: 85  ELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEIRREAAEASAEI 136


>ref|NP_958837.1| NTB [Tomato black ring virus]
          Length = 1205

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNF-DKRLSEAKNFFLSVLIPTYNASYGGKPIGLSET----IF 165
           LFYN+N  I LD F +YFNF  K+ +   +FF   ++   +A Y   P+ +SE     + 
Sbjct: 27  LFYNNNLDIVLDDFDFYFNFYAKKYNVLSSFFSDRVL---SALY--TPMSVSEAASLALE 81

Query: 166 SFSSFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLE 327
            F    + +LKINP+++LWEETLANWP +PGTSLLD  RTQY++RRE  EA  E
Sbjct: 82  DFCELALDKLKINPFHQLWEETLANWPVYPGTSLLDFFRTQYEIRREVAEASAE 135


>ref|NP_958814.1| polyprotein [Tomato black ring virus]
           gi|51316452|sp|Q8B8X3.1|POL1_TBRVM RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=P1A protein; Short=1A; AltName: Full=protease
           cofactor; Contains: RecName: Full=Putative ATP-dependent
           helicase; AltName: Full=1B; AltName: Full=NTP-binding
           protein; Short=NTB; AltName: Full=membrane-binding
           protein; Contains: RecName: Full=Viral genome-linked
           protein; AltName: Full=1C-VPg; Contains: RecName:
           Full=Picornain 3C-like protease; Short=3C-like protease;
           AltName: Full=1D-PRO; Contains: RecName:
           Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
           gi|25247332|gb|AAN72830.1| polyprotein [Tomato black
           ring virus]
          Length = 2266

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNF-DKRLSEAKNFFLSVLIPTYNASYGGKPIGLSET----IF 165
           LFYN+N  I LD F +YFNF  K+ +   +FF   ++   +A Y   P+ +SE     + 
Sbjct: 27  LFYNNNLDIVLDDFDFYFNFYAKKYNVLSSFFSDRVL---SALY--TPMSVSEAASLALE 81

Query: 166 SFSSFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLE 327
            F    + +LKINP+++LWEETLANWP +PGTSLLD  RTQY++RRE  EA  E
Sbjct: 82  DFCELALDKLKINPFHQLWEETLANWPVYPGTSLLDFFRTQYEIRREVAEASAE 135


>ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus]
           gi|130391|sp|P13025.1|POL1_GCMV RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=P1A protein; Short=1A; AltName: Full=Protease
           cofactor; Contains: RecName: Full=Putative ATP-dependent
           helicase; AltName: Full=1B; AltName:
           Full=Membrane-binding protein; AltName: Full=NTP-binding
           protein; Short=NTB; Contains: RecName: Full=Viral
           genome-linked protein; AltName: Full=1C-VPg; Contains:
           RecName: Full=Picornain 3C-like protease; Short=3C-like
           protease; AltName: Full=1D-PRO; Contains: RecName:
           Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
           gi|59346|emb|CAA33405.1| unnamed protein product
           [Grapevine chrome mosaic virus]
          Length = 2252

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 7/117 (5%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFDKRLSEAKNFFLSVL-IPTYNAS------YGGKPIGLSET 159
           LFYNSN  I+LD F++Y  ++  LS  K  FL +  IP  ++S       G       + 
Sbjct: 21  LFYNSNLDIDLDSFNFYKKYNNTLSLLKRKFLDLFCIPVSSSSPPAIQKNGLLSASNPKH 80

Query: 160 IFSFSSFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
           +F+F++F++ +  +NP+ ++WEETLANWP F G SLL CCRT  +VRRE  EA  E+
Sbjct: 81  LFAFANFVL-DCGVNPFLQIWEETLANWPLFQGQSLLACCRTTAEVRREAAEASAEI 136


>ref|NP_734047.1| protease cofactor [Grapevine chrome mosaic virus]
          Length = 571

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 7/117 (5%)
 Frame = +1

Query: 1   LFYNSNTSINLDLFSYYFNFDKRLSEAKNFFLSVL-IPTYNAS------YGGKPIGLSET 159
           LFYNSN  I+LD F++Y  ++  LS  K  FL +  IP  ++S       G       + 
Sbjct: 21  LFYNSNLDIDLDSFNFYKKYNNTLSLLKRKFLDLFCIPVSSSSPPAIQKNGLLSASNPKH 80

Query: 160 IFSFSSFLIRELKINPYNELWEETLANWPTFPGTSLLDCCRTQYDVRREQREARLEL 330
           +F+F++F++ +  +NP+ ++WEETLANWP F G SLL CCRT  +VRRE  EA  E+
Sbjct: 81  LFAFANFVL-DCGVNPFLQIWEETLANWPLFQGQSLLACCRTTAEVRREAAEASAEI 136