BLASTX nr result
ID: Paeonia22_contig00008863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00008863
(1398 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 581 e-163
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob... 575 e-161
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 566 e-159
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 563 e-158
gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus... 555 e-155
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 536 e-149
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 531 e-148
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 525 e-146
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 523 e-146
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 521 e-145
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 521 e-145
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 521 e-145
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 521 e-145
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 520 e-145
ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prun... 513 e-143
ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theob... 512 e-142
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 512 e-142
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 508 e-141
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 505 e-140
ref|XP_007146596.1| hypothetical protein PHAVU_006G053600g [Phas... 503 e-140
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 581 bits (1498), Expect = e-163
Identities = 285/369 (77%), Positives = 323/369 (87%)
Frame = +2
Query: 74 SMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNF 253
++D+PDVPKG+LP H+ELQRTRV+C DAPTHT N++YSGAY SMGV+N +RMDQF NF
Sbjct: 6 ALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNF 65
Query: 254 CVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHR 433
V+V RL+EDD+EFDMIGID +IANAFRRILIAE+PTMAIEKV IANNTS+VQDEVL+HR
Sbjct: 66 RVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHR 125
Query: 434 LGLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFV 613
LGL+PI ADPRLFD +SE+DTP EKNTIVF LHVRCERG PRLTVKS+ELKWLP+GSEF
Sbjct: 126 LGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEFP 185
Query: 614 LESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAV 793
L +E T++S SKPKTYTSFSCSQDSLPEF+ I KHPDII+AKLGPGQEIELEAHAV
Sbjct: 186 LATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHAV 245
Query: 794 KGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAI 973
KGMGKTHAKWSPVATAWYRMLPEVVLL+EIE +KAE+LVKKCPV VFDIEDI GKK+A
Sbjct: 246 KGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKAT 305
Query: 974 VGEKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEK 1153
V R CTLCRECIR W++ V++RR K+HFIFTIES GALPPE LF EAVK+LE+K
Sbjct: 306 VAR--PRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDK 363
Query: 1154 CERVITELS 1180
CERVITELS
Sbjct: 364 CERVITELS 372
>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
isoform 1 [Theobroma cacao]
Length = 383
Score = 575 bits (1482), Expect = e-161
Identities = 282/367 (76%), Positives = 318/367 (86%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G+LP HLELQRTRV+C DAP HT ++ YSGAY SMGV+N +R+D F NF V
Sbjct: 19 DLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRLDHFCHNFRV 78
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V RLTE+D+EFDMIGIDAAIANAFRRILIAE+PTMAIEKV IANNTSVVQDEVL+HRLG
Sbjct: 79 EVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQDEVLAHRLG 138
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI DPRLF+YMSE+D P EKNTIVFKLHV C+RGSPR+TVKSDELKWLPNGSE + E
Sbjct: 139 LIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWLPNGSELIKE 198
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
S K+ ++S SKP+TYTSFSCSQD+LPEFA +PI K+PDII++KLGPGQEIELEAHAVKG
Sbjct: 199 SRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEIELEAHAVKG 258
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPVATAWYRMLPEVVLL+E+E AE L KCPV VFDIED+G GKKRA V
Sbjct: 259 MGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLGKGKKRATVA 318
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R CTLCRECIR++ WE+ V++ R KDHFIFTIES GALPPE LFTEAVKILE+KCE
Sbjct: 319 R--PRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCE 376
Query: 1160 RVITELS 1180
RVITELS
Sbjct: 377 RVITELS 383
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 567 bits (1460), Expect = e-159
Identities = 277/367 (75%), Positives = 316/367 (86%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPD+PKGKLP H+ELQRTRV+C S APT+T N+ YSGAY +MGV+N +R +QF NF V
Sbjct: 29 DLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRNNFKV 88
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
++ RL ED++EFDMIGID ++ANAFRRILIAE+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 89 EIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAHRLG 148
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI+ DPRLF+YMSE+D P EKNTIVFKLH RC +GS RL V S ELKWLPNGSE +L
Sbjct: 149 LIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKWLPNGSELILG 208
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+E ++S +KPKTYTSFSCSQD+LPEF+ DPI K DII+AKLGPGQEIELEAHAVKG
Sbjct: 209 TEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIVAKLGPGQEIELEAHAVKG 268
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPVATAWYRMLPEVVLL++IE +AE LVKKCPVKVFDIEDIG GKKRA V
Sbjct: 269 MGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPVKVFDIEDIGKGKKRATVA 328
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R CTLCRECIRE+GW++ V+LRR DHFIFTIES GALPPE LFTEAVKILEEKCE
Sbjct: 329 R--PRICTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILEEKCE 386
Query: 1160 RVITELS 1180
RVITELS
Sbjct: 387 RVITELS 393
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 563 bits (1452), Expect = e-158
Identities = 275/367 (74%), Positives = 316/367 (86%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPD+PKGKLP H+ELQRTRV+C S APT+T N+ YSGAY +MGV+N +R +QF NF V
Sbjct: 29 DLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQFRDNFKV 88
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
++ RL ED++EFDMIGID ++ANAFRRILIAE+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 89 EIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEVLAHRLG 148
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PIK DPRLF+YMSE+D P EKNTIVFKLHVRC +GS RL V S ELKWLPNGSE +L
Sbjct: 149 LIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKWLPNGSELILG 208
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+E ++S +KPKTYTSFSCSQD+ PEF+ +PI K DII+AKLGPGQEIELEAHAVKG
Sbjct: 209 TEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIVAKLGPGQEIELEAHAVKG 268
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPVATAWYRMLPEV+LL++IE +AE LVKKCP+KVFDIEDIG GKKRA V
Sbjct: 269 MGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPLKVFDIEDIGKGKKRATVA 328
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R CTLCRECIRE+GW++ V+LRR DHFIFTIES GALPPE LFTEAVKILEEKCE
Sbjct: 329 R--PRACTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILEEKCE 386
Query: 1160 RVITELS 1180
RVITELS
Sbjct: 387 RVITELS 393
>gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus guttatus]
Length = 381
Score = 555 bits (1430), Expect = e-155
Identities = 270/367 (73%), Positives = 312/367 (85%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G LP HLELQRTR +C +DAP HT NI+YSGAY SMGV+N +R ++F KNF V
Sbjct: 17 DLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSMRFEKFCKNFRV 76
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V RL +D++EFDM+GIDA++ANAFRRILI+E+PTMAIE V +ANNTSVVQDEVL+HRLG
Sbjct: 77 EVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSVVQDEVLAHRLG 136
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+P+K DPRLF+Y SE+D P EKNTIVFKLH RCE+ S R+ VKS ELKWLP GSEF L
Sbjct: 137 LIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRCEKKSSRINVKSSELKWLPGGSEFALS 196
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+EK T +S SK KTYTSF+CSQDSLPEF+ +PI H DI LA LGPGQEIELEAHAVKG
Sbjct: 197 TEKPTQDSTSKVKTYTSFTCSQDSLPEFSSNPIAPTHDDITLAVLGPGQEIELEAHAVKG 256
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPVATAWYRMLPEV+LL+EIE +KAE+L+KKCPV VFDIEDIG G+KRA V
Sbjct: 257 MGKTHAKWSPVATAWYRMLPEVILLQEIEDEKAEELIKKCPVNVFDIEDIGKGRKRATVA 316
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R CTLCRECIR W++LV+L+R KDHFIFTIES GALPP+ LFTEAVKILE+KCE
Sbjct: 317 R--PRSCTLCRECIRGDDWDKLVALQRVKDHFIFTIESTGALPPDVLFTEAVKILEDKCE 374
Query: 1160 RVITELS 1180
RVITE+S
Sbjct: 375 RVITEMS 381
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 536 bits (1380), Expect = e-149
Identities = 273/368 (74%), Positives = 313/368 (85%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP+ KLP H+E QRTRV C DAP HT N+ YSGAY SMGV+N +++D F NF V
Sbjct: 20 DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 78
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V RLT+DD+EFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+QDEVL+HRLG
Sbjct: 79 EVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAHRLG 138
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI DPRLF+YMSE+DT EKNTIVFKLHV CERG PRLTVK++ELKWLPNGSE LE
Sbjct: 139 LIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSELPLE 198
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+ K +N +SKP+TYTSFS SQDSLPEF+ +PIR DI +A+LGPGQEIELEAHAVKG
Sbjct: 199 T-KPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIR-PMLDITIARLGPGQEIELEAHAVKG 256
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTHAKWSPVATAWYRMLPE+VLL+++E + AE+LVK CPV VFDIEDIG GKKRA V
Sbjct: 257 IGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRATVA 316
Query: 980 EKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
+ R CTLCREC+R + WE+ VS+RR KDHFIFTIES GAL PE LFTEAVKILE+KC
Sbjct: 317 Q--PRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDKC 374
Query: 1157 ERVITELS 1180
ERVITELS
Sbjct: 375 ERVITELS 382
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 531 bits (1368), Expect = e-148
Identities = 272/368 (73%), Positives = 310/368 (84%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP+ KLP H+E QRTRV C DAP HT N+ YSGAY SMGV+N +++D F NF V
Sbjct: 59 DLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNNFRV 117
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V RLT+DD+EFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+QDEVL+HRLG
Sbjct: 118 EVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAHRLG 177
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI DPRLF+YMSE+DT EKNTIVFKLHV CERG PRLTVK++ELKWLPNGSE LE
Sbjct: 178 LIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSELPLE 237
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+ K +N SKP+TYTSFS SQD LPEF+ +PIR DI +A+LGPGQEIELEAHAVKG
Sbjct: 238 T-KPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIR-PMLDITIARLGPGQEIELEAHAVKG 295
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTHAKWSPVATAWYRMLPE+VLL+++E + AE+LVK CPV VFDIEDIG GKKRA V
Sbjct: 296 IGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRATVA 355
Query: 980 EKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
R CTLCREC+R + WE+ VS+RR KDHFIFTIES GAL PE LFTEAVKILE+KC
Sbjct: 356 R--PRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDKC 413
Query: 1157 ERVITELS 1180
ERVITELS
Sbjct: 414 ERVITELS 421
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 525 bits (1351), Expect = e-146
Identities = 264/367 (71%), Positives = 304/367 (82%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G+LP HL+LQRTRV+C SDAP HT NI YSGAY S+GV+N +++D F NF V
Sbjct: 18 DLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFRDNFKV 77
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V +LT+DD+EFDMIGIDAAIANAFRRILI+E+PTMAIEKV IANNTS++QDEVL+HRLG
Sbjct: 78 EVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVLAHRLG 137
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI ADPRLF+Y+S +DTP EKNTIVFKLH C+RG PR TV S+ELKWLP GS+ + E
Sbjct: 138 LIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKWLPGGSQLLKE 197
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
SEK + SKP TYTSF+ QD +P+ P+ II+AKLGPGQEIELEAHAVKG
Sbjct: 198 SEK----ADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPGQEIELEAHAVKG 249
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTHAKWSPVATAWYRMLPEVVLL++IE + AE+L KKCPV VFDIEDIG GKKRA V
Sbjct: 250 LGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDIGNGKKRATVA 309
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R CTLCRECIR W++ VSLRR KDHFIFTIES GALPPE LFTEAVK+LE+KCE
Sbjct: 310 R--PRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLEDKCE 367
Query: 1160 RVITELS 1180
RVITELS
Sbjct: 368 RVITELS 374
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 523 bits (1348), Expect = e-146
Identities = 270/373 (72%), Positives = 311/373 (83%), Gaps = 2/373 (0%)
Frame = +2
Query: 68 VLSMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGK 247
+LS+D +VP KLP HLEL +TRV+C +DAP HT ++YSGAY MGV+N +R+D F +
Sbjct: 28 ILSLD--NVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCE 84
Query: 248 NFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLS 427
NF V+V+RLT+ DIEFDMIGID AIANAFRRILIAE+PTMAIE+V+IANNTSVVQDEVLS
Sbjct: 85 NFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLS 144
Query: 428 HRLGLVPIKADPRLFDYMSES-DTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGS 604
HRLGL+PI+ADPRLF+Y + D EKNTIVFKLHVRC+ G PR+TVKSD+LKWLPNGS
Sbjct: 145 HRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGS 204
Query: 605 EFVLESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEA 784
E L E + N+ SKPKT+TSF+CSQDSLPEF+ + I + + DIILAKLGPGQEIELEA
Sbjct: 205 E--LPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEA 262
Query: 785 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKK 964
HAVKG GKTHAKWSPVAT WYRMLPEVVLLK++E + AE+L KCPV VFDIEDIG GK+
Sbjct: 263 HAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKR 322
Query: 965 RAIVGEKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKI 1141
RA V R CTLCRECIR K WE+ VSLRR K+HFIFTIES GALPPE LFTEAVKI
Sbjct: 323 RAKVAR--PRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKI 380
Query: 1142 LEEKCERVITELS 1180
LE+KCERVITELS
Sbjct: 381 LEDKCERVITELS 393
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 521 bits (1343), Expect = e-145
Identities = 262/370 (70%), Positives = 308/370 (83%), Gaps = 2/370 (0%)
Frame = +2
Query: 77 MDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFC 256
M+L DVP KL HLEL +TRV+C+ DAP HT I YSGAY ++GV+N +R+D F +NF
Sbjct: 24 MNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNFK 82
Query: 257 VKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRL 436
V+V++LT+DDIEFDMIGID ++ANAFRRILIAE+PTMAIE+V+IANNTS++QDEVLSHRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 437 GLVPIKADPRLFDYMSES-DTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFV 613
GL+PI ADP LF+Y + EKNTIVFKLHVRCE+G PR+TVKSDELKWLPNGS+ +
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSDLI 202
Query: 614 LESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAV 793
+ K N+ SKPKT+TSFSCSQDSLPEF+K P+ +PDIILAKLGPGQEIELE HAV
Sbjct: 203 ADDTK--PNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHAV 260
Query: 794 KGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAI 973
KG+GKTHAKWSPVATAWYRMLPEVVL +++ + A++LV KCPV VFDIEDIG G+KRA
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 974 VGEKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEE 1150
V R CTLCRECIR K WE+ VSLRR KDHFIFTIES GA+PPE LFT+AVKILE+
Sbjct: 321 V--VKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILED 378
Query: 1151 KCERVITELS 1180
KCERVITELS
Sbjct: 379 KCERVITELS 388
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 521 bits (1343), Expect = e-145
Identities = 269/373 (72%), Positives = 312/373 (83%), Gaps = 2/373 (0%)
Frame = +2
Query: 68 VLSMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGK 247
+LS+D +VP KLP HLEL +TRV+C +DAP HT ++YSGAY +GV+N +R+D F +
Sbjct: 23 ILSLD--NVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCE 79
Query: 248 NFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLS 427
NF V+V+RLT+ DIEFDMIGID AIANAFRRILIAE+PTMAIE+V+IANNTSVVQDEVLS
Sbjct: 80 NFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLS 139
Query: 428 HRLGLVPIKADPRLFDYMSES-DTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGS 604
HRLGL+PI+ADPRLF+Y + D EKNTIVFKLHVRC+ G PR+TVKSD+LKWLPNGS
Sbjct: 140 HRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGS 199
Query: 605 EFVLESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEA 784
E L E + N+ SKPKT+TSF+CSQDSLPEF+ + I + + DIILAKLGPGQEIELEA
Sbjct: 200 E--LPCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEA 257
Query: 785 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKK 964
HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+ +E + AE+L KCPV VFDIEDIG GK+
Sbjct: 258 HAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKR 317
Query: 965 RAIVGEKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKI 1141
RA V R CTLCRECIR K WE+ VSLRR K+HFIFTIES GALPPE LFTEAVKI
Sbjct: 318 RAKVAR--PRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKI 375
Query: 1142 LEEKCERVITELS 1180
LE+KCERVITELS
Sbjct: 376 LEDKCERVITELS 388
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 521 bits (1341), Expect = e-145
Identities = 256/363 (70%), Positives = 297/363 (81%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G+LP HL+LQRTRV+C S+APT+T NI+YSGAY MGV+N + D F +NF V
Sbjct: 3 DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
++ + E DIEFD+IGIDAAIANAFRRILIAE+PTMAIEKV IANNTSV+ DEVLSHRLG
Sbjct: 63 EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+P+K DPR F +MSE D P EKNT+VFKLHV CER R TVK+DELKWLPNGSE LE
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELRLE 182
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
+E+ NS SK +TYTSF+CSQDS+PEF+ +R +I +A+LGPGQEIELEAHAVKG
Sbjct: 183 TERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAVKG 242
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPVATAWYR+LPE+ LL EI+ KKA++LVKKCP KVFDIED GG RA V
Sbjct: 243 MGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRATVA 302
Query: 980 EKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKCE 1159
R C+LCRECIR++ WE+LVS+RR KDHFIF IES GALPPE LFTEAVKILEEKCE
Sbjct: 303 R--PRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCE 360
Query: 1160 RVI 1168
+
Sbjct: 361 NAM 363
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 521 bits (1341), Expect = e-145
Identities = 262/368 (71%), Positives = 301/368 (81%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
+L DV +G+LP H+ Q TRV C DAPT+T ++YSG+Y SMGV+N +R+D F +NF +
Sbjct: 30 NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
KV L +D +EFDMIGIDAA+ANAFRRILI+E+PTMAIEKVFIANNTSV+QDEVL+HRLG
Sbjct: 90 KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PIK DPRLF+Y+S +DTP EKNTIV KLH RC RG PR +V S ELKWLPNGSEF E
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKWLPNGSEFAKE 209
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
SEK SKP TYTSFSC QDSLPEFA +PI DIILAKLGPGQEIELEAHAVKG
Sbjct: 210 SEK----PDSKPSTYTSFSCGQDSLPEFAGNPISTVE-DIILAKLGPGQEIELEAHAVKG 264
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
MGKTHAKWSPV TAWYRM PEVVLL+ I+G+ AE+L++KCP VFDIED G KK+AIV
Sbjct: 265 MGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVA 324
Query: 980 EKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
+ +R CTLCRECIR ++ WE+ V+L R KDHFIFTIES GALPPE LFTEAVKILE KC
Sbjct: 325 D--SRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKC 382
Query: 1157 ERVITELS 1180
ERVITELS
Sbjct: 383 ERVITELS 390
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 520 bits (1340), Expect = e-145
Identities = 260/370 (70%), Positives = 309/370 (83%), Gaps = 2/370 (0%)
Frame = +2
Query: 77 MDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFC 256
M+L DVP KL HLEL +TRV+C+ DAP HT I YSGAY ++GV+N +R+D F +NF
Sbjct: 24 MNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNFK 82
Query: 257 VKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRL 436
V+V++LT+DDIEFDMIGID ++ANAFRRILIAE+PTMAIE+V+IANNTS++QDEVLSHRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 437 GLVPIKADPRLFDYMSES-DTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFV 613
GL+PI ADP LF+Y + EKNTIVFKLHVRCE+G PR+ VKSDELKWLPNGS+ +
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRIIVKSDELKWLPNGSDLI 202
Query: 614 LESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAV 793
+ K N+ SKPKT+TSFSCSQDSLPEF+K P+ +PDIILAKLGPGQEIELE HAV
Sbjct: 203 ADDTK--PNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDIILAKLGPGQEIELEVHAV 260
Query: 794 KGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAI 973
KG+GKTHAKWSPVATAWYRMLPEVVL+++++ + A++LV KCPV VFDIEDIG G+KRA
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 974 VGEKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEE 1150
V R CTLCRECIR K WE+ VSLRR KDHFIFTIES GA+PP+ LFT+AVKILE+
Sbjct: 321 V--VKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILED 378
Query: 1151 KCERVITELS 1180
KCERVITELS
Sbjct: 379 KCERVITELS 388
>ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
gi|462400951|gb|EMJ06508.1| hypothetical protein
PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 513 bits (1322), Expect = e-143
Identities = 260/368 (70%), Positives = 303/368 (82%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
+L DVP G+LP ++E QRTRV C +DAP HT +YSGAY SM VEN +D F NF V
Sbjct: 31 NLSDVPMGRLPSNIEFQRTRVDCKADAPIHTDTFQYSGAYSSMRVENSF-LDNFCDNFRV 89
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
+V RLTED++EFDMIGID A+ANAFRRILI+E+PTMAIEKV IANNTSV+QDEVL+HRLG
Sbjct: 90 EVIRLTEDEMEFDMIGIDPALANAFRRILISEVPTMAIEKVLIANNTSVIQDEVLAHRLG 149
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PIKADPRLF+Y +E++T EKNTIVFKLHV CER RL+VKS EL WLPNGSEF LE
Sbjct: 150 LIPIKADPRLFEY-AENNTASEKNTIVFKLHVCCERSGQRLSVKSKELIWLPNGSEFPLE 208
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
S+ S SKPKTYTSF+CSQDSLPEF+ +PI DI++A+LGPGQEIELEAHAVKG
Sbjct: 209 SQDSKTGSSSKPKTYTSFTCSQDSLPEFSSNPIAPALGDILIARLGPGQEIELEAHAVKG 268
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTH+KWSPV WY+MLPE+VLL++IE ++AE+LV CPVKVFDIEDIG GKKRA V
Sbjct: 269 IGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQQAEKLVAICPVKVFDIEDIGKGKKRATVA 328
Query: 980 EKSARKCTLCRECIRE-KGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
R CTLCRECIRE KGWE +SL+RKKDHFIFTIES+G PPE L TEAVKILEEKC
Sbjct: 329 R--PRACTLCRECIREGKGWENAISLQRKKDHFIFTIESSGVFPPEVLVTEAVKILEEKC 386
Query: 1157 ERVITELS 1180
+RVI++LS
Sbjct: 387 DRVISDLS 394
>ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
gi|508720075|gb|EOY11972.1| RNA polymerase I subunit 43
isoform 4 [Theobroma cacao]
Length = 323
Score = 512 bits (1319), Expect = e-142
Identities = 252/325 (77%), Positives = 284/325 (87%)
Frame = +2
Query: 206 MGVENGIRMDQFGKNFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVF 385
MGV+N +R+D F NF V+V RLTE+D+EFDMIGIDAAIANAFRRILIAE+PTMAIEKV
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 386 IANNTSVVQDEVLSHRLGLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLT 565
IANNTSVVQDEVL+HRLGL+PI DPRLF+YMSE+D P EKNTIVFKLHV C+RGSPR+T
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 566 VKSDELKWLPNGSEFVLESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIIL 745
VKSDELKWLPNGSE + ES K+ ++S SKP+TYTSFSCSQD+LPEFA +PI K+PDII+
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 746 AKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPV 925
+KLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLL+E+E AE L KCPV
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 926 KVFDIEDIGGGKKRAIVGEKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGAL 1105
VFDIED+G GKKRA V R CTLCRECIR++ WE+ V++ R KDHFIFTIES GAL
Sbjct: 241 NVFDIEDLGKGKKRATVAR--PRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGAL 298
Query: 1106 PPEELFTEAVKILEEKCERVITELS 1180
PPE LFTEAVKILE+KCERVITELS
Sbjct: 299 PPEVLFTEAVKILEDKCERVITELS 323
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 512 bits (1318), Expect = e-142
Identities = 266/369 (72%), Positives = 299/369 (81%), Gaps = 1/369 (0%)
Frame = +2
Query: 77 MDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFC 256
M+LPDVP KLP H+ELQRTRV C +DAP HT I+YSGA+ SMG +N +R+D F NF
Sbjct: 30 MNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 88
Query: 257 VKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRL 436
++V L EDDIEFDMIGID A+ANAFRRILI+E+PTMAIEKV ANNTS+VQDEVL+HRL
Sbjct: 89 IEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRL 148
Query: 437 GLVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVL 616
GLVPI+ DPRLF Y S+ D P E NTIVF+LH CERG PRLTV S L WLPNGSEF L
Sbjct: 149 GLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFPL 207
Query: 617 ESEKLTANSISKPKTYTSFSCSQDSL-PEFAKDPIRVKHPDIILAKLGPGQEIELEAHAV 793
S+K +N SKPKTYTSFSCSQ++L EF+ +PI K DIILA+LGPGQEIELEAHAV
Sbjct: 208 VSDKSVSN--SKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265
Query: 794 KGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAI 973
KGMGKTHAKWSPVATAWYRMLPEVVL++EIE + AE+L KKCPV VFDIEDI GKKRA
Sbjct: 266 KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDI-AGKKRAT 324
Query: 974 VGEKSARKCTLCRECIREKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEK 1153
V R CTLCRECIR WE+ V+LRR KDHFIF IES GALPPE LFTEAVKILE+K
Sbjct: 325 VAR--PRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDK 382
Query: 1154 CERVITELS 1180
CER+I ELS
Sbjct: 383 CERLIAELS 391
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 508 bits (1308), Expect = e-141
Identities = 257/368 (69%), Positives = 298/368 (80%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G LP HLELQRTR +C +DAP H ++ YSGAY SMGV+N +R++ F ++F V
Sbjct: 25 DLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDFKV 83
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
V LTE + FDMIG+ A IANAFRRIL+AE+P+MAIEKVF+ANNTSV+QDEVL+HRLG
Sbjct: 84 DVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHRLG 143
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI ADPRLF+Y+SE+D P EKNTIVFKLHV+C +G PR V + ELKWLPNGSE V E
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSELVKE 203
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
S LT +KPKTYTSFS SQDS P FAK+PI DI++AKLGPGQEIELEAHAVKG
Sbjct: 204 SGGLT----TKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAVKG 259
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTHAKWSPVATAWYRMLPEV+LLKE EGK AE+LVK CP KVFDIED+G G+KRA V
Sbjct: 260 IGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVA 319
Query: 980 EKSARKCTLCRECIRE-KGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
R C+LCRECIRE W + V LRR K+HFIFTIES G+ PP+ LF EAVKILE+KC
Sbjct: 320 R--PRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKC 377
Query: 1157 ERVITELS 1180
ERVI+ELS
Sbjct: 378 ERVISELS 385
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 505 bits (1301), Expect = e-140
Identities = 255/368 (69%), Positives = 298/368 (80%), Gaps = 1/368 (0%)
Frame = +2
Query: 80 DLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGKNFCV 259
DLPDVP G LP HLELQRTRV+C D+ H I +SGAY SMGV+N +R++ F ++F V
Sbjct: 25 DLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDFKV 83
Query: 260 KVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLSHRLG 439
V LTE D+ FDMIG+ A IANAFRRIL+AE+P+MAIEKV++ANNTSV+QDEVL+HRLG
Sbjct: 84 DVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVANNTSVIQDEVLAHRLG 143
Query: 440 LVPIKADPRLFDYMSESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGSEFVLE 619
L+PI ADPRLF+Y+SE+D P EKNTIVFKLHV+C +G PR V + ELKWLPNGSE + E
Sbjct: 144 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVLTSELKWLPNGSELIKE 203
Query: 620 SEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEAHAVKG 799
S S + PKTYTSF+ SQDS PEFA++PIR DI++AKLGPGQEIELEAHAVKG
Sbjct: 204 S----GGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLGPGQEIELEAHAVKG 259
Query: 800 MGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKKRAIVG 979
+GKTHAKWSPVATAWYRMLPEVVLLKE EGK AE+LVK CP KVFDIED+G G+KRA V
Sbjct: 260 IGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVA 319
Query: 980 EKSARKCTLCRECIRE-KGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKILEEKC 1156
R C+LCRECIR+ WE+ V LRR K+HFIFTIES G+ PPE LF EAVKILE+KC
Sbjct: 320 R--PRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKC 377
Query: 1157 ERVITELS 1180
ERVI+ELS
Sbjct: 378 ERVISELS 385
>ref|XP_007146596.1| hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris]
gi|561019819|gb|ESW18590.1| hypothetical protein
PHAVU_006G053600g [Phaseolus vulgaris]
Length = 386
Score = 503 bits (1296), Expect = e-140
Identities = 259/373 (69%), Positives = 305/373 (81%), Gaps = 2/373 (0%)
Frame = +2
Query: 68 VLSMDLPDVPKGKLPDHLELQRTRVICASDAPTHTVNIEYSGAYMSMGVENGIRMDQFGK 247
+LS+D DVP KLP HLEL RTRV+C +DAP HT I YSGAY ++GV+N + D+F +
Sbjct: 21 ILSLD--DVPS-KLPPHLELFRTRVLCNNDAPIHTDTIHYSGAYGALGVDNSQQFDRFRE 77
Query: 248 NFCVKVERLTEDDIEFDMIGIDAAIANAFRRILIAEIPTMAIEKVFIANNTSVVQDEVLS 427
NF V+V+RLT+ D+EFDMIGID AIANAFRRILI+E+PTMAIE+V+IANNTS+VQDEVLS
Sbjct: 78 NFKVEVKRLTDSDMEFDMIGIDPAIANAFRRILISEVPTMAIERVYIANNTSIVQDEVLS 137
Query: 428 HRLGLVPIKADPRLFDYM-SESDTPKEKNTIVFKLHVRCERGSPRLTVKSDELKWLPNGS 604
HRLGL+PI+ DPRLF+Y S D EKNTIVF+LH RC G PR+TVKSD+LKWLPNGS
Sbjct: 138 HRLGLIPIRIDPRLFEYPDSAGDDNNEKNTIVFRLHERCRVGQPRITVKSDKLKWLPNGS 197
Query: 605 EFVLESEKLTANSISKPKTYTSFSCSQDSLPEFAKDPIRVKHPDIILAKLGPGQEIELEA 784
E L SE + N+ SKPKT+TSF+CSQ+SLPEF+ + + + DIILAKLGPGQEIELEA
Sbjct: 198 E--LPSEDVKPNTSSKPKTFTSFTCSQNSLPEFSSNSLELTDSDIILAKLGPGQEIELEA 255
Query: 785 HAVKGMGKTHAKWSPVATAWYRMLPEVVLLKEIEGKKAEQLVKKCPVKVFDIEDIGGGKK 964
HAVKG+G+THAKWSPVATAWYRMLPEVVLL++ ++AE+LV KC VFDIEDIG GK+
Sbjct: 256 HAVKGIGRTHAKWSPVATAWYRMLPEVVLLEDFVDEQAEKLVNKCEPNVFDIEDIGKGKR 315
Query: 965 RAIVGEKSARKCTLCRECIR-EKGWEELVSLRRKKDHFIFTIESAGALPPEELFTEAVKI 1141
RA V R CTLCRECIR K WE+ +S+RR K HFIFTIES GALPPE LFTEAVKI
Sbjct: 316 RATVAR--PRNCTLCRECIRGGKEWEDRISIRRVKHHFIFTIESTGALPPEVLFTEAVKI 373
Query: 1142 LEEKCERVITELS 1180
LE+KCERVITE S
Sbjct: 374 LEDKCERVITEFS 386