BLASTX nr result
ID: Paeonia22_contig00008188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00008188
(2041 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec... 912 0.0
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] 912 0.0
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec... 900 0.0
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s... 890 0.0
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr... 889 0.0
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac... 889 0.0
ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation spec... 888 0.0
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec... 879 0.0
ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citr... 879 0.0
ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Caps... 879 0.0
ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation spec... 877 0.0
ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Popu... 875 0.0
ref|NP_176297.1| cleavage and polyadenylation specificity factor... 874 0.0
ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arab... 874 0.0
ref|XP_002323824.2| cleavage and polyadenylation specificity fac... 872 0.0
gb|AAL66977.1| putative cleavage and polyadenylation specificity... 872 0.0
ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] g... 867 0.0
gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indi... 867 0.0
ref|XP_003592965.1| Cleavage and polyadenylation specificity fac... 867 0.0
gb|EMT17383.1| Cleavage and polyadenylation specificity factor s... 866 0.0
>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 694
Score = 912 bits (2358), Expect = 0.0
Identities = 475/646 (73%), Positives = 526/646 (81%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 50 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLLSDYVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 110 ATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHV 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPELH+IPIYYAS LAKR
Sbjct: 230 REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKR 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYINSMN RIRNQ A SNPF FKHI L SIENF DVGPSVVMASP GLQSG S
Sbjct: 290 CMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 350 RQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
DF QTS FL EL P NIILVHGE+ EMGRLK+KLI + + N KI SPKNC+ V++Y S
Sbjct: 410 DFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P VGE VSGLLVKK +YQ+MAPDDL V ST ++TQRITI
Sbjct: 470 EKMAKTIGRLAEKT---PGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITI 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PY+G F VIKHR+KQIY SVESL D E F VH+RVTV+ ESEKHI L WTSDP SD
Sbjct: 527 PYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+GE G +
Sbjct: 587 MVSDSIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNL 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VI+VDGNVA LDK+SG VESENEGLKERVRVAF++IQ A+KPIPLS
Sbjct: 647 VISVDGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLS 692
>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
Length = 687
Score = 912 bits (2358), Expect = 0.0
Identities = 475/646 (73%), Positives = 526/646 (81%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 43 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTH 102
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLLSDYVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 103 ATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAG 162
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H
Sbjct: 163 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHV 222
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPELH+IPIYYAS LAKR
Sbjct: 223 REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKR 282
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYINSMN RIRNQ A SNPF FKHI L SIENF DVGPSVVMASP GLQSG S
Sbjct: 283 CMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLS 342
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 343 RQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 402
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
DF QTS FL EL P NIILVHGE+ EMGRLK+KLI + + N KI SPKNC+ V++Y S
Sbjct: 403 DFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNS 462
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P VGE VSGLLVKK +YQ+MAPDDL V ST ++TQRITI
Sbjct: 463 EKMAKTIGRLAEKT---PGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITI 519
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PY+G F VIKHR+KQIY SVESL D E F VH+RVTV+ ESEKHI L WTSDP SD
Sbjct: 520 PYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISD 579
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+GE G +
Sbjct: 580 MVSDSIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNL 639
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VI+VDGNVA LDK+SG VESENEGLKERVRVAF++IQ A+KPIPLS
Sbjct: 640 VISVDGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLS 685
>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 693
Score = 900 bits (2325), Expect = 0.0
Identities = 467/646 (72%), Positives = 522/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 49 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTH 108
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLLSDYVKVSK S EDMLYDEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 109 ATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAG 168
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P F PD+CIIEST G+QLH+ +H
Sbjct: 169 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHV 228
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPELH++PIYYAS LAKR
Sbjct: 229 REKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKR 288
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYINSMN RIRNQ A SNPF FKHI L SIENF DVGPSVVMASPGGLQSG S
Sbjct: 289 CMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLS 348
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G V GTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 349 RQLFDMWCSDKKNACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 408
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
DF QTS FL EL P NIILVHGE+ EMGRLK+KLI + + N KI SPKNC+ V++Y S
Sbjct: 409 DFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNCQSVEMYFNS 468
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSGLLVKK +YQ+MAPDDL V ST ++TQRITI
Sbjct: 469 EKMAKTIGRLAEKT---PEVGETVSGLLVKKGFTYQIMAPDDLHVFWQLSTANVTQRITI 525
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PY+G F VIKHR+KQIY SVESL D E F VH+RVTV+ +SEKHI L WTSDP SD
Sbjct: 526 PYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHDSEKHISLHWTSDPISD 585
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ +V SE+ +E+ K+AEKVIH +LVSLFGDVK+ G +
Sbjct: 586 MVSDSIVALVLNISLEIPKVIVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLEGNGNL 645
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VI+VDGNV LDK+SG VESENEGLKERVRVAF++IQ A+KPIP S
Sbjct: 646 VISVDGNVVHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPPS 691
>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
notabilis]
Length = 693
Score = 890 bits (2300), Expect = 0.0
Identities = 463/647 (71%), Positives = 526/647 (81%), Gaps = 13/647 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS +DVLL+THFHLDH ASLPYFLEKT+FKGRVFMT+
Sbjct: 51 LFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTY 110
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDMLYDEQDI SMDKIEVIDFHQT+EVNGIRFWCY AG
Sbjct: 111 ATKAIYKLLLTDYVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAG 170
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS +E+RHL AAETP FSPDVCIIEST G+Q H+ ++
Sbjct: 171 HVLGAAMFMVDIAGVRVLYTGDYSRDEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRNI 230
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPEL +IPIYYAS LAKR
Sbjct: 231 REKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPELQNIPIYYASPLAKR 290
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
C++VY+TY SMN RIRN A SNPF+FKHI L SIENFKDVGPSVVMASPGGLQSG S
Sbjct: 291 CLSVYETYTLSMNDRIRN--AKSNPFIFKHISPLKSIENFKDVGPSVVMASPGGLQSGLS 348
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DKRNAC+I G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 349 RQLFDMWCSDKRNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 408
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D QTSAFL+EL P NIILVHGE+ EMGRLK+KL+ + + N KI +PKNC+ V++Y S
Sbjct: 409 DSAQTSAFLEELRPPNIILVHGEANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNS 468
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VG+IVSGLLVKK SYQ+MAPDDL V +T ++TQRITI
Sbjct: 469 QKMAKAIGKLAEKT---PEVGDIVSGLLVKKGFSYQIMAPDDLHVFSQLATANITQRITI 525
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYS FSVIKHR+KQIY SVES TD E VHDRVTV+ ES+KHI L WTSDP SD
Sbjct: 526 PYSSAFSVIKHRLKQIYDSVESSTDEESGVPTLRVHDRVTVKHESDKHISLHWTSDPISD 585
Query: 452 MVSDSIVALILNMNWEMIHKVVISE--SKQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN+N E+ VV SE +ED EK+AEKVI+ +LVSLFGDVK+ GK+
Sbjct: 586 MVSDSVVALVLNINREVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGNGKI 645
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLST 138
+INVDGNVA LDK+SG VESENEGLKERVR AFR+IQ A+KPIPLS+
Sbjct: 646 MINVDGNVAQLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSS 692
>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533874|gb|ESR44992.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 694
Score = 889 bits (2298), Expect = 0.0
Identities = 456/646 (70%), Positives = 523/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEV+DFHQT+EVNGI+FWCY AG
Sbjct: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNI 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPE H+IPIYYAS LAK+
Sbjct: 230 REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKK 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPF FKHI LNSI++F DVGPSVVMASPGGLQSG S
Sbjct: 290 CMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+S+P EVT NM +H ISFSAHA
Sbjct: 350 RQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGES EMGRLK KL+ + N KI +PKNC+ V++Y S
Sbjct: 410 DYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSG+LVKK +YQ+MAPDDL + ST ++TQRIT+
Sbjct: 470 EKMAKTIGRLAEKT---PEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQRITV 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG F VIK+R++QIY SVES TD E VHDRVT++Q+SEKHI + WTSDP SD
Sbjct: 527 PYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN+N E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+G+ GK+
Sbjct: 587 MVSDSVVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKV 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VINVDGNVA LDK+SG VESENEGLKERV+ AF +IQ A+KPIPLS
Sbjct: 647 VINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692
>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
cacao] gi|508706214|gb|EOX98110.1| Cleavage and
polyadenylation specificity factor 73-I [Theobroma cacao]
Length = 694
Score = 889 bits (2298), Expect = 0.0
Identities = 453/646 (70%), Positives = 522/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHP YSG+ ALP+FDEIDPS ID LL+THFHLDH ASLPYFLEKT+F+GRVFMTH
Sbjct: 50 LFDCGIHPGYSGMAALPYFDEIDPSTIDALLITHFHLDHAASLPYFLEKTTFRGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKL+L+DYVKVSK S EDML+DEQDI SMDKIEVIDFHQT+EVNGI+FWCY AG
Sbjct: 110 ATKAIYKLILTDYVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRHI 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTD +H TISQGGRVLIP LDEYWSNHPELH+IPIYYAS LAK+
Sbjct: 230 REKRFTDAVHSTISQGGRVLIPAFALGRSQELLLILDEYWSNHPELHNIPIYYASPLAKK 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPF FKHI LNSIE+F DVGPSVVMASPGGLQSG S
Sbjct: 290 CMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DKRNACI+ G VEGTLAKTI+++P EVT M +H ISFSAHA
Sbjct: 350 RQLFDMWCSDKRNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLCMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EMGRLK+KLI + N KI +PKNC+ V++Y S
Sbjct: 410 DYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITELTDGNTKIITPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSG+LVKK +YQ+MAPDD+ + ST ++TQRITI
Sbjct: 470 EKMAKTIGRLAEKT---PEVGETVSGVLVKKGFTYQIMAPDDIHIFSQLSTANITQRITI 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P++G F VIKHR++QIY SVES TD E VHDRVTV+Q+S+KHI L WTSDP SD
Sbjct: 527 PFAGAFGVIKHRLEQIYESVESSTDEESGVPTLRVHDRVTVKQDSDKHISLHWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+GE GK+
Sbjct: 587 MVSDSIVALVLNISREIPKVVVESEAVKMEEENGKKAEKVIHALLVSLFGDVKLGENGKL 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
+I+VDGNVA LDK+SG VESENEGLKERV+ AFR+IQ A+KPIPLS
Sbjct: 647 MISVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLS 692
>ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 888 bits (2294), Expect = 0.0
Identities = 456/646 (70%), Positives = 522/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEV+DFHQT+EVNGI+FWCY AG
Sbjct: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNI 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYWSNHPE H+IPIYYAS LAK+
Sbjct: 230 REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKK 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPF FKHI LNSI++F DVGPSVVMASPGGLQSG S
Sbjct: 290 CMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+S+P EVT NM +H ISFSAHA
Sbjct: 350 RQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGES EMGRLK KL+ + N KI +PKNC+ V++Y S
Sbjct: 410 DYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSG+LVKK +YQ+MAPDDL + ST ++TQRIT+
Sbjct: 470 EKMAKTIGRLAEKT---PEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQRITV 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG F VIK+R++QIY SVES TD E VHDRVT++Q+SEKHI + WTSDP SD
Sbjct: 527 PYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN+N E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+G GK+
Sbjct: 587 MVSDSVVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGGNGKV 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VINVDGNVA LDK+SG VESENEGLKERV+ AF +IQ A+KPIPLS
Sbjct: 647 VINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692
>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 879 bits (2271), Expect = 0.0
Identities = 449/646 (69%), Positives = 521/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+F GRVFMTH
Sbjct: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMD+IEV+DFHQT+EVNGI+FWCY AG
Sbjct: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNI 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
RE+RFTDVIH TISQGGRVLIP LDEYWSNHPE H+IPIYYAS LAK+
Sbjct: 230 RERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKK 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPF FKHI LNSI++ DVGPSVVMASPGGLQSG S
Sbjct: 290 CMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+S+P EVT NM +H ISFSAHA
Sbjct: 350 RQLFDIWCSDKKNACVIPGYIVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGES EMGRLK KL+ + N KI +PKNC+ V++Y S
Sbjct: 410 DYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LA EK+P+VGE VSG+LVK +YQ+MAPDDL + ST ++TQRITI
Sbjct: 470 EKMAKTIGRLA---EKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTANITQRITI 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG F V+K+R++QIY SVES TD E VHDRVT++Q+SEKHI + WTSDP SD
Sbjct: 527 PYSGAFGVMKYRLEQIYESVESSTDEESGVPTLQVHDRVTLKQDSEKHISMCWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN+N E+ VV SE+ +E+ K+AEKVIH +LVSLFGDV++GE GK+
Sbjct: 587 MVSDSVVALVLNINQEVPKLVVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGENGKL 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VINVDGNVA LDK+SG VESENEGLKE+V+ AF++IQ A+KPIPLS
Sbjct: 647 VINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLS 692
>ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
gi|557533873|gb|ESR44991.1| hypothetical protein
CICLE_v10000467mg [Citrus clementina]
Length = 694
Score = 879 bits (2271), Expect = 0.0
Identities = 450/646 (69%), Positives = 521/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+F GRVFMTH
Sbjct: 50 LFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSGRVFMTH 109
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMD+IEV+DFHQT+EVNGI+FWCY AG
Sbjct: 110 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAG 169
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ ++
Sbjct: 170 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNI 229
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
RE+RFTDVIH TISQGGRVLIP LDEYWSNHPE H+IPIYYAS LAK+
Sbjct: 230 RERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKK 289
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPF FKHI LNSI++ DVGPSVVMASPGGLQSG S
Sbjct: 290 CMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGGLQSGLS 349
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+S+P EVT NM +H ISFSAHA
Sbjct: 350 RQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYISFSAHA 409
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGES EMGRLK KL+ + N KI +PKNC+ V++Y S
Sbjct: 410 DYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSVEMYFNS 469
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LA EK+P+VGE VSG+LVK +YQ+MAPDDL + ST ++TQRITI
Sbjct: 470 EKMAKTIGRLA---EKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTTNITQRITI 526
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG F VIK+R++QIY SVES TD E VHDRVT++Q+SEKHI + WTSDP SD
Sbjct: 527 PYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDPISD 586
Query: 452 MVSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN+N E+ VV SE+ +E+ K+AEKVIH +LVSLFGDVK+G+ GK+
Sbjct: 587 MVSDSIVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKL 646
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VINVDGNVA LDK+SG VESENEGLKE+V+ AF++IQ A+KPIPL+
Sbjct: 647 VINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLA 692
>ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Capsella rubella]
gi|482569021|gb|EOA33209.1| hypothetical protein
CARUB_v10019868mg [Capsella rubella]
Length = 725
Score = 879 bits (2270), Expect = 0.0
Identities = 451/648 (69%), Positives = 522/648 (80%), Gaps = 15/648 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTH
Sbjct: 80 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTH 139
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEVIDFHQT+EVNGI+FWCY AG
Sbjct: 140 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAG 199
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H
Sbjct: 200 HVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHI 259
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T++QGGRVLIP LDEYW+NHP+LH+IPIYYAS LAK+
Sbjct: 260 REKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKK 319
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPFVFKHI LNSI++F+DVGPSVVMA+PGGLQSG S
Sbjct: 320 CMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFRDVGPSVVMATPGGLQSGLS 379
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NACII G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 380 RQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 439
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EM RLK+KL N KI +PKNCE V++Y S
Sbjct: 440 DYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESVEMYFNS 499
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P VG+ VSG+LVKK +YQ+MAPD+L V ST ++TQRITI
Sbjct: 500 EKLAKTIGRLAEKT---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITI 556
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P++G F VIKHR+++I+ SVES TD E VH+RVTV+QESEKHI L W+SDP SD
Sbjct: 557 PFAGAFGVIKHRLEKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISD 616
Query: 452 MVSDSIVALILNMNWEMIHKVVISE----SKQEDGEKRAEKVIHGILVSLFGDVKVGEEG 285
MVSDSIVAL+LN++ E + K+V+ E +E+ K+ EKVI+ +LVSLFGDVK+GE G
Sbjct: 617 MVSDSIVALVLNISRE-VPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENG 675
Query: 284 KMVINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
K+VI VDGNVA LDKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 676 KLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 723
>ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Cicer arietinum]
Length = 687
Score = 877 bits (2265), Expect = 0.0
Identities = 451/646 (69%), Positives = 525/646 (81%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS +DVLL+THFHLDH ASLPYFLEKT+F+GRVFMT+
Sbjct: 45 LFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTY 104
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLLSDYVKVSK S EDML+DEQDI SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 105 ATKAIYKLLLSDYVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTLEVNGIRFWCYTAG 164
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAETP FSPDVCIIEST G+Q H+ +H
Sbjct: 165 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHT 224
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYW+NHPEL +IPIYYAS LAK+
Sbjct: 225 REKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKK 284
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
C+TVY+TY SMN RI+N A SNPF FKHI +L+SI+ FKDVGPSVVMASPGGLQSG S
Sbjct: 285 CLTVYETYTLSMNDRIQN--AKSNPFSFKHISALSSIDIFKDVGPSVVMASPGGLQSGLS 342
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 343 RQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYISFSAHA 402
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D QTSAFL+EL+P NIILVHGE+ EMGRLK+KL ++ + N KI +PKNC+ V++Y S
Sbjct: 403 DSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLTSQFADRNTKILTPKNCQSVEMYFNS 462
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSGLLVKK +YQ+MAPDDL V ST ++TQRITI
Sbjct: 463 QKMAKTIGKLAEKT---PEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITI 519
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG FSVI+HR+KQIY SVE D E LVH+RVTV+ E+EKH+ L WTSDP SD
Sbjct: 520 PYSGAFSVIQHRLKQIYESVELSVDEESGVPTLLVHERVTVKHETEKHVSLHWTSDPISD 579
Query: 452 MVSDSIVALILNMNWEMIHKVVISESK--QEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN++ ++ + S++ +E EK+AEKV+H +L SLFGDVKVGE GK+
Sbjct: 580 MVSDSVVALVLNISRDLPKIMAESDAVKIEEANEKKAEKVMHALLNSLFGDVKVGENGKL 639
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
+IN+DGNVA L+KESG VESENEGLKERVR AFR+IQ ++KPIPLS
Sbjct: 640 IINIDGNVAELNKESGEVESENEGLKERVRTAFRRIQSSVKPIPLS 685
>ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Populus trichocarpa]
gi|566212712|ref|XP_002323825.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
gi|550320032|gb|EEF03956.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
gi|550320033|gb|EEF03958.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
Length = 699
Score = 875 bits (2262), Expect = 0.0
Identities = 450/645 (69%), Positives = 519/645 (80%), Gaps = 13/645 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+F+GRVFMTH
Sbjct: 51 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTH 110
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DE+DI SMDKIEVIDFHQTL+VNGI+FWCY AG
Sbjct: 111 ATKAIYKLLLTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTLDVNGIKFWCYTAG 170
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H
Sbjct: 171 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHL 230
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TIS GGRVLIP LDEYW+NHPELH+IPIYYAS LAK+
Sbjct: 231 REKRFTDVIHSTISLGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYASPLAKK 290
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CMTVYQTYI SMN RIRNQ A SNPF FKHI LNSIE+F DVGPSVVMASPGGLQSG S
Sbjct: 291 CMTVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGGLQSGLS 350
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC++ G VEGTLAKTI+++P EV NM +H ISFSAHA
Sbjct: 351 RQLFDMWCSDKKNACVLPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHA 410
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EMGRLK+KLI N KI +PKNC+ V++Y S
Sbjct: 411 DYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITEFADGNTKIITPKNCQSVEMYFNS 470
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAE+T P VGE VSG+LVKK +YQ+MAP DL V ST ++TQRITI
Sbjct: 471 EKMAKTIGKLAERT---PDVGETVSGILVKKGFTYQIMAPGDLHVFSQLSTGNITQRITI 527
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P+SG F VIKHR++QIY SVES TD E VH+ VTV+QES++HI L WT+DP SD
Sbjct: 528 PFSGAFGVIKHRLEQIYESVESGTDEESGFPTLQVHELVTVKQESDRHISLHWTADPISD 587
Query: 452 MVSDSIVALILNMNWEMIHKVVISE--SKQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ +V SE +E+ EK+AEKVI+ +LVSLFGDVK+GE GK+
Sbjct: 588 MVSDSIVALVLNISREVPKVIVESEDIKSEEENEKKAEKVIYALLVSLFGDVKLGENGKL 647
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 144
V+ VDGNVA LDK+SG VESENEGLKERVR AFR+I+ A++PIPL
Sbjct: 648 VLRVDGNVAELDKQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692
>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 73-I
[Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
cleavage and polyadenylation specificity factor subunit
73-I [Arabidopsis thaliana]
gi|79320389|ref|NP_001031215.1| cleavage and
polyadenylation specificity factor subunit 73-I
[Arabidopsis thaliana]
gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-I; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
Short=CPSF 73 kDa subunit I
gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
and polyadenylation specificity factor; 72745-70039
[Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
putative cleavage and polyadenylation specificity factor
73 kDa subunit [Arabidopsis thaliana]
gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
[Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana]
Length = 693
Score = 874 bits (2259), Expect = 0.0
Identities = 451/648 (69%), Positives = 520/648 (80%), Gaps = 15/648 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTH
Sbjct: 48 LFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTH 107
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEVIDFHQT+EVNGI+FWCY AG
Sbjct: 108 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAG 167
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H
Sbjct: 168 HVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHI 227
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T++QGGRVLIP LDEYW+NHP+LH+IPIYYAS LAK+
Sbjct: 228 REKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKK 287
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPFVFKHI LNSI++F DVGPSVVMA+PGGLQSG S
Sbjct: 288 CMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLS 347
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NACII G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 348 RQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 407
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EM RLK+KL+ N KI +PKNCE V++Y S
Sbjct: 408 DYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNS 467
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P VG+ VSG+LVKK +YQ+MAPD+L V ST ++TQRITI
Sbjct: 468 EKLAKTIGRLAEKT---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITI 524
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P+ G F VIKHR+++I+ SVE TD E VH+RVTV+QESEKHI L W+SDP SD
Sbjct: 525 PFVGAFGVIKHRLEKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISD 584
Query: 452 MVSDSIVALILNMNWEMIHKVVISE----SKQEDGEKRAEKVIHGILVSLFGDVKVGEEG 285
MVSDSIVALILN++ E + K+V+ E +E+ K+ EKVI+ +LVSLFGDVK+GE G
Sbjct: 585 MVSDSIVALILNISRE-VPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENG 643
Query: 284 KMVINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
K+VI VDGNVA LDKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 644 KLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691
>ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
lyrata] gi|297332410|gb|EFH62828.1| hypothetical protein
ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata]
Length = 693
Score = 874 bits (2258), Expect = 0.0
Identities = 451/648 (69%), Positives = 519/648 (80%), Gaps = 15/648 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTH
Sbjct: 48 LFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTH 107
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEVIDFHQT+EVNGI+FWCY AG
Sbjct: 108 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAG 167
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H
Sbjct: 168 HVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHI 227
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T++QGGRVLIP LDEYW+NHP+LH+IPIYYAS LAK+
Sbjct: 228 REKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKK 287
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPFVFKHI LNSI++F DVGPSVVMA+PGGLQSG S
Sbjct: 288 CMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLS 347
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NACII G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 348 RQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 407
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EM RLK+KL N KI +PKNCE V++Y S
Sbjct: 408 DYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESVEMYFNS 467
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LA KT P VG+ VSG+LVKK +YQ+MAPD+L V ST ++TQRITI
Sbjct: 468 EKLAKTIGRLAGKT---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITI 524
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P+ G F VIKHR+++I+ SVES TD E VH+RVTV+QESEKHI L W+SDP SD
Sbjct: 525 PFVGAFGVIKHRLEKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISD 584
Query: 452 MVSDSIVALILNMNWEMIHKVVISE----SKQEDGEKRAEKVIHGILVSLFGDVKVGEEG 285
MVSDSIVALILN++ E + K+V+ E +E+ K+ EKVI+ +LVSLFGDVK+GE G
Sbjct: 585 MVSDSIVALILNISRE-VPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENG 643
Query: 284 KMVINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
K+VI VDGNVA LDKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 644 KLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691
>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
[Populus trichocarpa] gi|550320034|gb|EEF03957.2|
cleavage and polyadenylation specificity factor family
protein [Populus trichocarpa]
Length = 695
Score = 872 bits (2253), Expect = 0.0
Identities = 449/645 (69%), Positives = 518/645 (80%), Gaps = 13/645 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIH AYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+F+GRVFMTH
Sbjct: 51 LFDCGIHLAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTH 110
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DE+DI SMDKIEVIDFHQT++VNGI+FWCY AG
Sbjct: 111 ATKAIYKLLLTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAG 170
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+QLH+ +H
Sbjct: 171 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHI 230
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TIS GGRVLIP LDEYWSNHPELH+IP+YYAS LAK+
Sbjct: 231 REKRFTDVIHSTISLGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPVYYASPLAKK 290
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CMTVYQTYI SMN RIRNQ A SNPF FKHI LNSIE+F DVGPSVVMA+PGGLQSG S
Sbjct: 291 CMTVYQTYILSMNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLS 350
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NAC+I G VEGTLAKTI+++P EV NM +H ISFSAHA
Sbjct: 351 RQLFDMWCSDKKNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHA 410
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EMGRLK+KLI N KI +PKNC+ V++Y S
Sbjct: 411 DYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNCQSVEMYFNS 470
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK G LAE+T P VGE VSG+LVKK +YQ+MAP+DL V ST ++TQRITI
Sbjct: 471 EKMAKTTGKLAERT---PDVGETVSGILVKKGFTYQIMAPEDLHVFSQLSTGNITQRITI 527
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P+SG F VIKHR++QIY SVES TD E VH+ VTV+QES++HI L WT+DP SD
Sbjct: 528 PFSGAFGVIKHRLEQIYESVESGTDEESGSPTLQVHELVTVKQESDRHISLHWTADPISD 587
Query: 452 MVSDSIVALILNMNWEMIHKVVISE--SKQEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDSIVAL+LN++ E+ +V SE +E+ EK+AEKVI+ LVSLFGDVK+GE GK+
Sbjct: 588 MVSDSIVALVLNISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGENGKL 647
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 144
VI+VDGNVA LDK+SG VESENEGLKERVR AFR+IQ A++PIPL
Sbjct: 648 VISVDGNVAELDKQSGDVESENEGLKERVRTAFRRIQSAVRPIPL 692
>gb|AAL66977.1| putative cleavage and polyadenylation specificity factor [Arabidopsis
thaliana]
Length = 693
Score = 872 bits (2253), Expect = 0.0
Identities = 450/648 (69%), Positives = 519/648 (80%), Gaps = 15/648 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFH+DH ASLPYFLEKT+F GRVFMTH
Sbjct: 48 LFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTH 107
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLL+DYVKVSK S EDML+DEQDI SMDKIEVIDFHQT+EVNGI+FWCY AG
Sbjct: 108 ATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAG 167
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +RILYTGDYS EE+RHL AAE P FSPD+CIIESTSG+QLH+S+H
Sbjct: 168 HVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHI 227
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T++QGGRVLIP LDEYW+NHP+LH+IPIYYAS LAK+
Sbjct: 228 REKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKK 287
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYI SMN RIRNQ A SNPFVFKHI LNSI++F DVGPSVVMA+PGGLQSG S
Sbjct: 288 CMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLS 347
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+NACII G VEGTLAKTI+++P EVT NM +H ISFSAHA
Sbjct: 348 RQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 407
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
D+ QTS FL EL P NIILVHGE+ EM RLK+KL+ N KI +PKNCE V++Y S
Sbjct: 408 DYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNS 467
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P VG+ VSG+LVKK +YQ+MAPD+L V ST ++TQRITI
Sbjct: 468 EKLAKTIGRLAEKT---PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITI 524
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
P+ G F VIKHR+++I+ SVE TD E VH+RVTV+QESEKHI L W+SDP SD
Sbjct: 525 PFVGAFGVIKHRLEKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISD 584
Query: 452 MVSDSIVALILNMNWEMIHKVVISE----SKQEDGEKRAEKVIHGILVSLFGDVKVGEEG 285
MVSDSIVALILN++ E + K+V+ E +E+ K+ EKVI+ +LVSLFGDVK+GE G
Sbjct: 585 MVSDSIVALILNISRE-VPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENG 643
Query: 284 KMVINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
K+VI VD NVA LDKESG VESE+ GLKERVRVAF +IQ A+KPIPLS
Sbjct: 644 KLVIRVDSNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLS 691
>ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] gi|27573349|gb|AAO20067.1|
putative cleavage and polyadenylation specifity factor
protein [Oryza sativa Japonica Group]
gi|29126360|gb|AAO66552.1| putative cleavage and
polyadenylation specifity factor [Oryza sativa Japonica
Group] gi|108712151|gb|ABF99946.1| Cleavage and
polyadenylation specificity factor, 73 kDa subunit,
putative, expressed [Oryza sativa Japonica Group]
gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza sativa
Japonica Group] gi|125588676|gb|EAZ29340.1| hypothetical
protein OsJ_13407 [Oryza sativa Japonica Group]
Length = 700
Score = 867 bits (2240), Expect = 0.0
Identities = 438/644 (68%), Positives = 517/644 (80%), Gaps = 12/644 (1%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 57 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTH 116
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIY+LLLSDYVKVSK S EDML+DEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 117 ATKAIYRLLLSDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAG 176
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+Q H+ +H
Sbjct: 177 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHV 236
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T+SQGGRVLIP LDEYW+NHPELH IPIYYAS LAK+
Sbjct: 237 REKRFTDVIHTTVSQGGRVLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKK 296
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYINSMN RIRNQ A SNPF FKHI SLNSI+NF DVGPSVVMASPGGLQSG S
Sbjct: 297 CMAVYQTYINSMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLS 356
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFDKWC DK+N+C+I G VEGTLAKTI+++P EVT +M +H ISFSAHA
Sbjct: 357 RQLFDKWCTDKKNSCVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHA 416
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
DF QTS FLDEL P NI+LVHGE+ EM RLK+KLI++ +N+K+ +PKNC+ V++Y S
Sbjct: 417 DFPQTSTFLDELQPPNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSS 476
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LA EK+P+ GE V+GLLVKK +YQ+MAP+DL V ST ++TQRI +
Sbjct: 477 EKMAKTIGRLA---EKVPEAGESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAV 533
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE----FLVHDRVTVRQESEKHILLTWTSDPTSDM 450
PYSG F VIK+R+KQIY SVES T+ +VH+RVT+R ESE ++ L W+SDP SDM
Sbjct: 534 PYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSDPISDM 593
Query: 449 VSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKMV 276
VSDS+VA++LN+ E V + E+ QE+ E+ A+KV++ ++VSLFGDVKV EEGK+V
Sbjct: 594 VSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLV 653
Query: 275 INVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 144
I+VDG VA LD SG VE EN L+ER++ AFR+IQ A++PIPL
Sbjct: 654 ISVDGQVAHLDGRSGGVECENATLRERIKTAFRRIQGAVRPIPL 697
>gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group]
Length = 700
Score = 867 bits (2240), Expect = 0.0
Identities = 438/644 (68%), Positives = 517/644 (80%), Gaps = 12/644 (1%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHPAYSG+ ALP+FDEIDPS IDVLL+THFHLDH ASLPYFLEKT+FKGRVFMTH
Sbjct: 57 LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTH 116
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIY+LLLSDYVKVSK S EDML+DEQDIL SMDKIEVIDFHQTLEVNGIRFWCY AG
Sbjct: 117 ATKAIYRLLLSDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAG 176
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAE P FSPD+CIIEST G+Q H+ +H
Sbjct: 177 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHV 236
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH T+SQGGRVLIP LDEYW+NHPELH IPIYYAS LAK+
Sbjct: 237 REKRFTDVIHTTVSQGGRVLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKK 296
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
CM VYQTYINSMN RIRNQ A SNPF FKHI SLNSI+NF DVGPSVVMASPGGLQSG S
Sbjct: 297 CMAVYQTYINSMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLS 356
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFDKWC DK+N+C+I G VEGTLAKTI+++P EVT +M +H ISFSAHA
Sbjct: 357 RQLFDKWCTDKKNSCVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHA 416
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRS 786
DF QTS FLDEL P NI+LVHGE+ EM RLK+KLI++ +N+K+ +PKNC+ V++Y S
Sbjct: 417 DFPQTSTFLDELQPPNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSS 476
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LA EK+P+ GE V+GLLVKK +YQ+MAP+DL V ST ++TQRI +
Sbjct: 477 EKMAKTIGRLA---EKVPEAGESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAV 533
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE----FLVHDRVTVRQESEKHILLTWTSDPTSDM 450
PYSG F VIK+R+KQIY SVES T+ +VH+RVT+R ESE ++ L W+SDP SDM
Sbjct: 534 PYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSDPISDM 593
Query: 449 VSDSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKMV 276
VSDS+VA++LN+ E V + E+ QE+ E+ A+KV++ ++VSLFGDVKV EEGK+V
Sbjct: 594 VSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLV 653
Query: 275 INVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPL 144
I+VDG VA LD SG VE EN L+ER++ AFR+IQ A++PIPL
Sbjct: 654 ISVDGQVAHLDGRSGDVECENATLRERIKTAFRRIQGAVRPIPL 697
>ref|XP_003592965.1| Cleavage and polyadenylation specificity factor subunit 3-I [Medicago
truncatula] gi|357445453|ref|XP_003593004.1| Cleavage and
polyadenylation specificity factor subunit 3-I [Medicago
truncatula] gi|355482013|gb|AES63216.1| Cleavage and
polyadenylation specificity factor subunit 3-I [Medicago
truncatula] gi|355482052|gb|AES63255.1| Cleavage and
polyadenylation specificity factor subunit 3-I [Medicago
truncatula]
Length = 690
Score = 867 bits (2239), Expect = 0.0
Identities = 445/646 (68%), Positives = 519/646 (80%), Gaps = 13/646 (2%)
Frame = -3
Query: 2039 LFDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTH 1860
LFDCGIHP YSG+ ALP+FDEIDPS +DVLL+THFHLDH ASLPYFLEKT+FKGRVFMT+
Sbjct: 48 LFDCGIHPGYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTY 107
Query: 1859 ATKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAG 1680
ATKAIYKLLLSDYVKVSK S +DMLYDEQDI SMDKIEVIDFHQT+EVNGIRFWCY AG
Sbjct: 108 ATKAIYKLLLSDYVKVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAG 167
Query: 1679 HVLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHD 1500
HVLGAAMFMVDI +R+LYTGDYS EE+RHL AAETP FSPDVCIIEST G+Q H+ +H
Sbjct: 168 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHT 227
Query: 1499 REKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKR 1320
REKRFTDVIH TISQGGRVLIP LDEYW+NHPEL +IPIYYAS LAK+
Sbjct: 228 REKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKK 287
Query: 1319 CMTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFS 1140
C+TVY+TY SMN RI+N A SNPF FKHI +L+SI+ FKDVGPSVVMASPGGLQSG S
Sbjct: 288 CLTVYETYTLSMNDRIQN--AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLS 345
Query: 1139 RQLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHA 960
RQLFD WC DK+N+C+I G VEGTLAKTIL++P EVT +M +H ISFSAHA
Sbjct: 346 RQLFDMWCSDKKNSCVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHA 405
Query: 959 DFKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIARRS--NMKIFSPKNCERVQIYLRS 786
D QTSAFL+EL+P NIILVHG + EMGRLK+KL+ + + N KI +PKNC+ V++Y S
Sbjct: 406 DSAQTSAFLEELNPPNIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNS 465
Query: 785 KRVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITI 618
+++AK IG LAEKT P+VGE VSGLLVKK +YQ+MAPDDL V ST ++TQRITI
Sbjct: 466 QKMAKTIGKLAEKT---PEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITI 522
Query: 617 PYSGVFSVIKHRVKQIYSSVESLTDNE-----FLVHDRVTVRQESEKHILLTWTSDPTSD 453
PYSG F VI+ R+KQIY SVE D E LVHDRVTV+ ESEKH+ L W SDP +D
Sbjct: 523 PYSGAFCVIQSRLKQIYESVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPIND 582
Query: 452 MVSDSIVALILNMNWEMIHKVVISESK--QEDGEKRAEKVIHGILVSLFGDVKVGEEGKM 279
MVSDS+VAL+LN+N ++ V S++ +E+ EK+ EKV+ +L SLFG+VKVGE GK+
Sbjct: 583 MVSDSVVALVLNINRDLPKIVAESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKL 642
Query: 278 VINVDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
+IN+DGNVA L+KESG VESENEGLKERVR AFR+IQ ++KPIPLS
Sbjct: 643 IINIDGNVAELNKESGEVESENEGLKERVRTAFRRIQSSVKPIPLS 688
>gb|EMT17383.1| Cleavage and polyadenylation specificity factor subunit 3 [Aegilops
tauschii]
Length = 720
Score = 866 bits (2237), Expect = 0.0
Identities = 446/643 (69%), Positives = 513/643 (79%), Gaps = 11/643 (1%)
Frame = -3
Query: 2036 FDCGIHPAYSGIGALPFFDEIDPSLIDVLLVTHFHLDHCASLPYFLEKTSFKGRVFMTHA 1857
FDCGIHPAYSG+ ALP+FDEIDPS IDVLLVTHFHLDH ASLPYFLEKT+FKGRVFMTHA
Sbjct: 79 FDCGIHPAYSGMAALPYFDEIDPSAIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHA 138
Query: 1856 TKAIYKLLLSDYVKVSKTSFEDMLYDEQDILHSMDKIEVIDFHQTLEVNGIRFWCYPAGH 1677
TKAIY+LLLSDYVKVSK S EDML+DEQDI+ SMDKIEVIDFHQTLEVNGIRFWCY AGH
Sbjct: 139 TKAIYRLLLSDYVKVSKVSVEDMLFDEQDIIRSMDKIEVIDFHQTLEVNGIRFWCYTAGH 198
Query: 1676 VLGAAMFMVDIDSIRILYTGDYSCEENRHLCAAETPGFSPDVCIIESTSGIQLHESQHDR 1497
VLGAAMFMVDI +RILYTGDYS EE+RHL AAE P FSPD+CIIEST G+Q H+ +H R
Sbjct: 199 VLGAAMFMVDIAGVRILYTGDYSREEDRHLKAAEIPQFSPDICIIESTYGVQQHQPRHVR 258
Query: 1496 EKRFTDVIHKTISQGGRVLIPXXXXXXXXXXXXXLDEYWSNHPELHHIPIYYASLLAKRC 1317
EKRFTD IH T+SQGGRVLIP LDEYWSNHPELH IPIYYAS LAK+C
Sbjct: 259 EKRFTDAIHNTVSQGGRVLIPAFALGRAQELLLILDEYWSNHPELHKIPIYYASPLAKKC 318
Query: 1316 MTVYQTYINSMNVRIRNQVAISNPFVFKHILSLNSIENFKDVGPSVVMASPGGLQSGFSR 1137
M VYQTYINSMN RIRNQ A SNPF FKHI LNSI+NF DVGPSVVMASPG LQSG SR
Sbjct: 319 MAVYQTYINSMNERIRNQFAQSNPFHFKHIDPLNSIDNFHDVGPSVVMASPGSLQSGLSR 378
Query: 1136 QLFDKWCYDKRNACIISGLAVEGTLAKTILSQPTEVTXXXXXXXXXNMSIHRISFSAHAD 957
QLFDKWC DK+N C+I G AVEG+LAKTI+++P EVT NM I ISFSAHAD
Sbjct: 379 QLFDKWCTDKKNTCVIPGYAVEGSLAKTIINEPREVTLANGLTAPLNMQIFYISFSAHAD 438
Query: 956 FKQTSAFLDELDPSNIILVHGESKEMGRLKEKLIAR--RSNMKIFSPKNCERVQIYLRSK 783
F QTS FL+EL P NIILVHGE+ EMGRLK+KLI + +N KI SPKNC+ V++Y S+
Sbjct: 439 FPQTSGFLEELRPPNIILVHGEANEMGRLKQKLITQFDGTNTKIVSPKNCQSVEMYFSSE 498
Query: 782 RVAKVIGSLAEKTEKIPKVGEIVSGLLVKKSLSYQLMAPDDLLV----STVSLTQRITIP 615
++AK IG LA EK+P+VGE VSGLLVKK +YQ+MAP+DL V ST ++TQRI +P
Sbjct: 499 KMAKTIGRLA---EKVPEVGETVSGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAVP 555
Query: 614 YSGVFSVIKHRVKQIYSSVESLTDNE---FLVHDRVTVRQESEKHILLTWTSDPTSDMVS 444
YSG F VIK+R+KQIY SVES T+ + VH+RV +R +SE ++ L W+SDP SDMVS
Sbjct: 556 YSGSFEVIKYRLKQIYESVESSTEEDVPVLTVHERVAIRLDSESYVTLQWSSDPISDMVS 615
Query: 443 DSIVALILNMNWEMIHKVVISES--KQEDGEKRAEKVIHGILVSLFGDVKVGEEGKMVIN 270
DS+VA+ILN+ E V I E+ +E+ EK A KV++ ++VSLFGDVKV EEGK+VI
Sbjct: 616 DSVVAMILNIGREGPKVVPIEEAVKTEEETEKVARKVVYSLMVSLFGDVKVAEEGKLVIT 675
Query: 269 VDGNVAILDKESGVVESENEGLKERVRVAFRQIQIAMKPIPLS 141
VDG+VA LD SG VESEN GLKER++ AFR+IQ A++PIPLS
Sbjct: 676 VDGDVAHLDGRSGDVESENAGLKERIKTAFRRIQGAVRPIPLS 718