BLASTX nr result
ID: Paeonia22_contig00005279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00005279
(1652 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27814.3| unnamed protein product [Vitis vinifera] 64 2e-07
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-07
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-07
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-06
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi... 44 1e-06
ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi... 44 1e-06
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ... 41 9e-06
>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 64.3 bits (155), Expect = 2e-07
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Frame = +2
Query: 419 HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDSCLF--RALWSPYT---------LRTGR 565
+TFPFVVRS V+SAL+EG +VHCNI+KHGFDS +F +L + Y+ L G
Sbjct: 129 YTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGE 188
Query: 566 FLTRK*FLVKWM*RTWLLGLDDNGLCANWVL*KGLGVFQLMVASG 700
+ R +V W T ++ G N +GLGVF+ MV SG
Sbjct: 189 MVVRN--IVSW---TAVIA----GYVQNRYFKEGLGVFREMVGSG 224
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 64.3 bits (155), Expect = 2e-07
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Frame = +2
Query: 419 HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDSCLF--RALWSPYT---------LRTGR 565
+TFPFVVRS V+SAL+EG +VHCNI+KHGFDS +F +L + Y+ L G
Sbjct: 129 YTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGE 188
Query: 566 FLTRK*FLVKWM*RTWLLGLDDNGLCANWVL*KGLGVFQLMVASG 700
+ R +V W T ++ G N +GLGVF+ MV SG
Sbjct: 189 MVVRN--IVSW---TAVIA----GYVQNRYFKEGLGVFREMVGSG 224
>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 617
Score = 63.5 bits (153), Expect = 3e-07
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Frame = +2
Query: 419 HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDSCLF--RALWSPYTLRTGRFL------- 571
+TFPFV+RS V+SALKEG ++HCNIIKHGF+S +F +L S Y ++G L
Sbjct: 52 YTFPFVLRSCSVLSALKEGREIHCNIIKHGFESDVFVQSSLISLYA-QSGETLDSELVFD 110
Query: 572 -TRK*FLVKWM*RTWLLGLDDNGLCANWVL*KGLGVFQLMVASG 700
R +V W + G NG+ KGLGVF MV SG
Sbjct: 111 QMRVRNIVSW--TAMIAGYVQNGIHE-----KGLGVFLKMVDSG 147
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 61.2 bits (147), Expect = 1e-06
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Frame = +2
Query: 419 HTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDSCLF--RALWSPYTLRTGRFL------- 571
+TFPFV+RS V+SAL+EG ++HCNIIKHGF+S +F +L + Y ++G L
Sbjct: 133 YTFPFVLRSCSVLSALREGREIHCNIIKHGFESDVFVQSSLITLYA-QSGETLDSELVFD 191
Query: 572 -TRK*FLVKWM*RTWLLGLDDNGLCANWVL*KGLGVFQLMVASG 700
R +V W + G NG+ KGLGVF MV SG
Sbjct: 192 QMRVRNIVSW--TAMIAGYVQNGIPE-----KGLGVFLKMVDSG 228
>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 335 SQFHH-SKRNFFCPRRLKFLGPPLQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGF 511
SQ H SK F ++L G P+ S T FV+++ +V+A EG+QVH +++K GF
Sbjct: 66 SQIHTLSKEPIFLFKKLTETGYPVPNS--FTLAFVLKACAIVTAFGEGLQVHSHVLKDGF 123
Query: 512 DSCLF 526
S LF
Sbjct: 124 GSSLF 128
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 517 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 624
+FVQ+SLV Y + EI + +F EM V+N+V WT
Sbjct: 127 LFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWT 162
>ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 376
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 335 SQFHH-SKRNFFCPRRLKFLGPPLQLSCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGF 511
SQ H SK F ++L G P+ S T FV+++ +V+A EG+QVH +++K GF
Sbjct: 66 SQIHTLSKEPIFLFKKLTETGYPVPNS--FTLAFVLKACAIVTAFGEGLQVHSHVLKDGF 123
Query: 512 DSCLF 526
S LF
Sbjct: 124 GSSLF 128
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 517 VFVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 624
+FVQ+SLV Y + EI + +F EM V+N+V WT
Sbjct: 127 LFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWT 162
>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 40.8 bits (94), Expect(2) = 9e-06
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 410 SCYHTFPFVVRSSGVVSALKEGIQVHCNIIKHGFDSCLFRA 532
+C+ TFP +++S G + ++EG +VHC KHGF S F A
Sbjct: 109 NCF-TFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVA 148
Score = 37.4 bits (85), Expect(2) = 9e-06
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 520 FVQSSLVTIYSQNGEIFNSEMIFGEMDVKNMVTWT 624
FV +SL+ +YS+ G + ++ +FGEM +N+V WT
Sbjct: 146 FVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWT 180