BLASTX nr result

ID: Ophiopogon27_contig00055629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00055629
         (741 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020324381.1| proline-rich extensin-like protein EPR1 [Onc...    59   3e-06

>ref|XP_020324381.1| proline-rich extensin-like protein EPR1 [Oncorhynchus kisutch]
          Length = 586

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
 Frame = -1

Query: 552 AHTSPS----PSNSLT---GPHSPSLETPQQPSPSPHLHDSHTSARPHPKHRRHTLSKQP 394
           +HT PS    PS++ T    PH+PS  TP    P+ H   SHTS   HP    HT S  P
Sbjct: 268 SHTLPSHTPLPSHTPTLTPFPHTPSSHTPTLSPPTLHTLPSHTSCSSHPS-LSHTPSSHP 326

Query: 393 NSLRHPFDYLPR----IISHQDPKTLTAKI------QTTLFPLPPSPTATNHHHSLSPAY 244
            S  HPF   P      +SH  P T T          +  FPL P P  T   H+L  ++
Sbjct: 327 PS--HPFPLNPSSHTPSLSHPFPLTPTLHTLPSHTPSSQPFPLNPCPLHTLPSHTLPLSH 384

Query: 243 TLSLSFLPPRNPTQP 199
              L+ LPP  P+ P
Sbjct: 385 PCPLTPLPPTLPSTP 399


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