BLASTX nr result
ID: Ophiopogon27_contig00055540
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00055540
(473 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020242355.1| RING-H2 finger protein ATL8-like [Asparagus ... 137 4e-37
gb|ACF83063.1| unknown [Zea mays] 100 3e-22
gb|KMZ63087.1| putative Ring finger protein [Zostera marina] 100 4e-22
ref|XP_010919831.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 99 1e-21
gb|AQK45360.1| Putative RING zinc finger domain superfamily prot... 99 1e-21
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi... 96 3e-21
gb|PAN07657.1| hypothetical protein PAHAL_A02970, partial [Panic... 97 4e-21
gb|OEL14757.1| hypothetical protein BAE44_0024223 [Dichanthelium... 98 4e-21
ref|XP_010235834.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 98 4e-21
ref|XP_015635020.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 ... 97 5e-21
ref|XP_002447001.2| E3 ubiquitin-protein ligase ATL4 [Sorghum bi... 97 7e-21
ref|XP_004953491.1| E3 ubiquitin-protein ligase ATL4-like [Setar... 97 7e-21
ref|XP_009400590.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 97 1e-20
ref|XP_002454457.2| E3 ubiquitin-protein ligase ATL4 [Sorghum bi... 97 1e-20
ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 ... 96 1e-20
ref|XP_020176569.1| E3 ubiquitin-protein ligase ATL4-like [Aegil... 96 1e-20
ref|XP_009401994.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 97 1e-20
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] 96 1e-20
dbj|BAF09694.1| Os02g0688800 [Oryza sativa Japonica Group] >gi|1... 96 1e-20
ref|NP_001130589.1| putative RING zinc finger domain superfamily... 96 2e-20
>ref|XP_020242355.1| RING-H2 finger protein ATL8-like [Asparagus officinalis]
Length = 261
Score = 137 bits (345), Expect = 4e-37
Identities = 76/137 (55%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = -1
Query: 413 LLVIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXL-NHLDXXXXXXXXXXXXXXXXXSC 237
LLVIATLLAFV+AFTI +HLI H++
Sbjct: 22 LLVIATLLAFVLAFTIVVHLILRLLARLSYVAPSPSLTHINATSSNPASTTNTTTK---- 77
Query: 236 TVDPRRKSLIDSLPLFTLSSLPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCIDAW 57
+DP K LIDSLPLFTLSSLP+ S+ C+ICLSQF ++KLRLLP C H FHS CIDAW
Sbjct: 78 -LDPNPKILIDSLPLFTLSSLPQSPSSNCTICLSQFTLNEKLRLLPPCLHAFHSSCIDAW 136
Query: 56 LKSTPSCPLCRSLVQIQ 6
LKS+PSCPLCRSLVQIQ
Sbjct: 137 LKSSPSCPLCRSLVQIQ 153
>gb|ACF83063.1| unknown [Zea mays]
Length = 367
Score = 100 bits (250), Expect = 3e-22
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = -1
Query: 230 DPRRKSLIDSLPLFTLSSLPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCIDAWLK 51
D ++ LIDSLPLFT++S SS C++CLS FA D +LRLLP CRH FH+ C+DAWL+
Sbjct: 122 DAEKQRLIDSLPLFTMASALPSSSPDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLR 181
Query: 50 STPSCPLCRSLVQI 9
+ PSCPLCRS V +
Sbjct: 182 TAPSCPLCRSAVAL 195
>gb|KMZ63087.1| putative Ring finger protein [Zostera marina]
Length = 354
Score = 100 bits (248), Expect = 4e-22
Identities = 46/70 (65%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -1
Query: 221 RKSLIDSLPLFTL-SSLPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCIDAWLKST 45
+K+++DSLPL TL SSLP+ SS C++CLS+F D+LRLLP CRH+FHS CID W+KST
Sbjct: 108 QKTVLDSLPLLTLASSLPK-SSPDCAVCLSKFEPQDQLRLLPACRHVFHSTCIDTWIKST 166
Query: 44 PSCPLCRSLV 15
PSCPLCRS +
Sbjct: 167 PSCPLCRSSI 176
>ref|XP_010919831.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Elaeis
guineensis]
Length = 372
Score = 99.0 bits (245), Expect = 1e-21
Identities = 58/140 (41%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Frame = -1
Query: 413 LLVIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXLNHLDXXXXXXXXXXXXXXXXXSCT 234
LL+IA +LAFV + +IHL+ + S
Sbjct: 45 LLIIAAILAFVFVASASIHLLLRFLSRPSSSSSSSSSSSSSAPPLIHHGRSSSTSSASSA 104
Query: 233 V-DPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLC 69
+ D + +LI+SLPLF+L+S LP+ SS C++CLS F D+LRLLP CRH FHS C
Sbjct: 105 LSDQEKAALIESLPLFSLASAVAVLPK-SSPDCAVCLSPFHPHDELRLLPACRHAFHSPC 163
Query: 68 IDAWLKSTPSCPLCRSLVQI 9
ID WL+STPSCPLCRS + +
Sbjct: 164 IDTWLRSTPSCPLCRSSITL 183
>gb|AQK45360.1| Putative RING zinc finger domain superfamily protein [Zea mays]
Length = 372
Score = 99.0 bits (245), Expect = 1e-21
Identities = 62/153 (40%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Frame = -1
Query: 407 VIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXLN------HLDXXXXXXXXXXXXXXXX 246
+IA+LLAFV +++IHL+ H D
Sbjct: 39 IIASLLAFVFLASVSIHLLLRFLSDRSSSSTSTSRPPPPQTHRDAPGSRAADASVARPAA 98
Query: 245 XSCTVDPRRKS----------LIDSLPLFT----LSSLPRLSSATCSICLSQFAADDKLR 108
VD R K LIDSLPLFT L+SLP SS C++CLS FA D +LR
Sbjct: 99 AVAPVDARGKEEAAAGDEKQRLIDSLPLFTMASALASLPG-SSPDCAVCLSPFAPDAELR 157
Query: 107 LLPECRHMFHSLCIDAWLKSTPSCPLCRSLVQI 9
LLP CRH FH+ C+DAWL++ PSCPLCRS V +
Sbjct: 158 LLPACRHAFHAACVDAWLRTAPSCPLCRSAVAL 190
>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
Length = 267
Score = 96.3 bits (238), Expect = 3e-21
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS FA + +LRLLP CRH FH+ C+
Sbjct: 13 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFAPEAELRLLPACRHAFHASCV 71
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ V +
Sbjct: 72 DAWLRTTPSCPLCRATVSL 90
>gb|PAN07657.1| hypothetical protein PAHAL_A02970, partial [Panicum hallii]
Length = 323
Score = 97.1 bits (240), Expect = 4e-21
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F+ D +LRLLP CRH FH+ C+
Sbjct: 119 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFSPDAELRLLPACRHAFHAACV 177
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ V +
Sbjct: 178 DAWLRTTPSCPLCRAAVSL 196
>gb|OEL14757.1| hypothetical protein BAE44_0024223 [Dichanthelium oligosanthes]
Length = 379
Score = 97.8 bits (242), Expect = 4e-21
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 4/73 (5%)
Frame = -1
Query: 221 RKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCIDAWL 54
++ LIDSLPLFT++S LP+ SS C++CLSQF D +LRLLP CRH FH+ C+DAWL
Sbjct: 111 KQRLIDSLPLFTMASALAALPK-SSPDCAVCLSQFTPDAELRLLPACRHAFHAACVDAWL 169
Query: 53 KSTPSCPLCRSLV 15
++TPSCPLCR+ V
Sbjct: 170 RTTPSCPLCRAAV 182
>ref|XP_010235834.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
distachyon]
gb|KQK00823.1| hypothetical protein BRADI_3g52050v3 [Brachypodium distachyon]
Length = 380
Score = 97.8 bits (242), Expect = 4e-21
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F AD +LRLLP CRH FH+ C+
Sbjct: 119 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFLADAELRLLPACRHAFHAACV 177
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ + +
Sbjct: 178 DAWLRTTPSCPLCRAAISL 196
>ref|XP_015635020.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 [Oryza sativa Japonica
Group]
emb|CAE04310.1| OSJNBb0016D16.1 [Oryza sativa Japonica Group]
emb|CAE03770.2| OSJNBa0013K16.19 [Oryza sativa Japonica Group]
dbj|BAF15601.1| Os04g0586700 [Oryza sativa Japonica Group]
gb|EAY95325.1| hypothetical protein OsI_17152 [Oryza sativa Indica Group]
dbj|BAG88729.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAS90710.1| Os04g0586700 [Oryza sativa Japonica Group]
Length = 359
Score = 97.4 bits (241), Expect = 5e-21
Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Frame = -1
Query: 413 LLVIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXLN--------HLDXXXXXXXXXXXX 258
LL+IA LLAFV+ +++IHL+ H
Sbjct: 30 LLIIAALLAFVLLASVSIHLLLRLLSRSSPPPPPPPPLPRTRREVHNVEAADASPVRRNG 89
Query: 257 XXXXXSCTVDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECR 90
V ++ LI+SLPLFT++S LP+ SS C++CLS F D +LRLLP CR
Sbjct: 90 VCEGKKEVVGDEKQRLIESLPLFTMASSLAALPK-SSPDCAVCLSPFTLDAELRLLPACR 148
Query: 89 HMFHSLCIDAWLKSTPSCPLCRSLVQI 9
H FH+ C+DAWL++TPSCPLCR+ V +
Sbjct: 149 HAFHAACVDAWLRTTPSCPLCRATVTL 175
>ref|XP_002447001.2| E3 ubiquitin-protein ligase ATL4 [Sorghum bicolor]
gb|KXG27003.1| hypothetical protein SORBI_3006G194700 [Sorghum bicolor]
Length = 398
Score = 97.4 bits (241), Expect = 7e-21
Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
Frame = -1
Query: 230 DPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCID 63
D ++ LIDSLPLFT++S LP+ SS C++CLS F D +LRLLP CRH FH+ C+D
Sbjct: 117 DDEKQRLIDSLPLFTMASSLAALPK-SSPDCAVCLSPFTPDAELRLLPACRHAFHAACVD 175
Query: 62 AWLKSTPSCPLCRSLV 15
AWL++TPSCPLCR+ V
Sbjct: 176 AWLRTTPSCPLCRAAV 191
>ref|XP_004953491.1| E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 402
Score = 97.4 bits (241), Expect = 7e-21
Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 20/155 (12%)
Frame = -1
Query: 413 LLVIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXLN----------------HLDXXXX 282
LL+IA LLAFV +++IHL+ + +
Sbjct: 49 LLIIAALLAFVFCASVSIHLLLRCLARASSSSHPSPSPFPAARARRASDAEAEEVGAGSA 108
Query: 281 XXXXXXXXXXXXXSCTVDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDK 114
+ VD ++ LI SLPLFT++S LP+ SS C++CLS F+ D +
Sbjct: 109 RRSAAAVGPEEAQAAEVDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFSPDAE 167
Query: 113 LRLLPECRHMFHSLCIDAWLKSTPSCPLCRSLVQI 9
LRLLP CRH FH+ C+DAWL++TPSCPLCR+ V +
Sbjct: 168 LRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSL 202
>ref|XP_009400590.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Musa acuminata
subsp. malaccensis]
Length = 365
Score = 96.7 bits (239), Expect = 1e-20
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
Frame = -1
Query: 230 DPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCID 63
D +LIDSLP+FTL+S LP+ SS C++CLS+F D+LRLLP CRH FH LC+D
Sbjct: 108 DQENAALIDSLPVFTLASALAFLPK-SSLDCAVCLSRFRPQDELRLLPACRHAFHCLCVD 166
Query: 62 AWLKSTPSCPLCRSLVQI 9
WL++TPSCPLCR+ + +
Sbjct: 167 PWLRTTPSCPLCRASISL 184
>ref|XP_002454457.2| E3 ubiquitin-protein ligase ATL4 [Sorghum bicolor]
gb|KXG30986.1| hypothetical protein SORBI_3004G277300 [Sorghum bicolor]
Length = 400
Score = 97.1 bits (240), Expect = 1e-20
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F+ D +LRLLP CRH FH+ C+
Sbjct: 121 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFSPDAELRLLPACRHAFHAACV 179
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ V +
Sbjct: 180 DAWLRTTPSCPLCRAAVSL 198
>ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4 [Oryza brachyantha]
Length = 360
Score = 96.3 bits (238), Expect = 1e-20
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Frame = -1
Query: 413 LLVIATLLAFVVAFTITIHLIXXXXXXXXXXXXXXLNH------LDXXXXXXXXXXXXXX 252
LL+IA LL FV+ +++IHL+ D
Sbjct: 34 LLIIAALLTFVLLASVSIHLLLRLLSRSPPPLPRTRREERTVEAADAFSVRPSIHGVPEG 93
Query: 251 XXXSCTVDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHM 84
D +++ LI+SLPLFT++S LP+ SS C++CLS F D +LRLLP CRH
Sbjct: 94 KKEVGEGDEKQR-LIESLPLFTMASSLAALPK-SSPDCAVCLSPFTLDAELRLLPACRHA 151
Query: 83 FHSLCIDAWLKSTPSCPLCRSLVQI 9
FH+ C+DAWL++TPSCPLCR+ V I
Sbjct: 152 FHAACVDAWLRTTPSCPLCRATVSI 176
>ref|XP_020176569.1| E3 ubiquitin-protein ligase ATL4-like [Aegilops tauschii subsp.
tauschii]
Length = 366
Score = 96.3 bits (238), Expect = 1e-20
Identities = 44/79 (55%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F D +LRLLP CRH FH+ C+
Sbjct: 115 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFVPDAELRLLPACRHAFHAACV 173
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ + +
Sbjct: 174 DAWLRNTPSCPLCRAAISL 192
>ref|XP_009401994.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Musa acuminata
subsp. malaccensis]
Length = 402
Score = 96.7 bits (239), Expect = 1e-20
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
Frame = -1
Query: 230 DPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCID 63
D +K+LIDSLPLF+L+S LP+ SS C++CL F D+LRLLP CRH FHS C+D
Sbjct: 142 DQDKKALIDSLPLFSLASSLAVLPK-SSPDCAVCLYPFRPHDELRLLPACRHAFHSRCVD 200
Query: 62 AWLKSTPSCPLCRSLVQI 9
WL+STPSCPLCRS + +
Sbjct: 201 PWLRSTPSCPLCRSSIAL 218
>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 96.3 bits (238), Expect = 1e-20
Identities = 44/79 (55%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F D +LRLLP CRH FH+ C+
Sbjct: 121 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFVPDAELRLLPACRHAFHAACV 179
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ + +
Sbjct: 180 DAWLRNTPSCPLCRAAISL 198
>dbj|BAF09694.1| Os02g0688800 [Oryza sativa Japonica Group]
gb|EAZ24231.1| hypothetical protein OsJ_07979 [Oryza sativa Japonica Group]
Length = 373
Score = 96.3 bits (238), Expect = 1e-20
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS FA + +LRLLP CRH FH+ C+
Sbjct: 119 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFAPEAELRLLPACRHAFHASCV 177
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ V +
Sbjct: 178 DAWLRTTPSCPLCRATVSL 196
>ref|NP_001130589.1| putative RING zinc finger domain superfamily protein [Zea mays]
gb|ACF78867.1| unknown [Zea mays]
gb|ACF87964.1| unknown [Zea mays]
gb|AQK73630.1| E3 ubiquitin-protein ligase ATL4 [Zea mays]
Length = 378
Score = 96.3 bits (238), Expect = 2e-20
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Frame = -1
Query: 233 VDPRRKSLIDSLPLFTLSS----LPRLSSATCSICLSQFAADDKLRLLPECRHMFHSLCI 66
VD ++ LI SLPLFT++S LP+ SS C++CLS F+ D LRLLP CRH FH+ C+
Sbjct: 114 VDDEKERLIASLPLFTMASALAALPK-SSPDCAVCLSPFSPDADLRLLPACRHAFHAACV 172
Query: 65 DAWLKSTPSCPLCRSLVQI 9
DAWL++TPSCPLCR+ V +
Sbjct: 173 DAWLRTTPSCPLCRAAVSL 191