BLASTX nr result

ID: Ophiopogon27_contig00055184 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00055184
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY14787.1| hypothetical protein RhiirB3_380388 [Rhizophagus ...    65   3e-11
gb|PKY48674.1| hypothetical protein RhiirA4_422353 [Rhizophagus ...    65   3e-11
dbj|GBC39169.1| zinc finger bed domain-containing protein ricesl...    55   3e-06
gb|PKC01454.1| hypothetical protein RhiirA5_381719 [Rhizophagus ...    53   4e-06

>gb|PKY14787.1| hypothetical protein RhiirB3_380388 [Rhizophagus irregularis]
          Length = 267

 Score = 65.5 bits (158), Expect(2) = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -3

Query: 159 SNVILAVTHCGFWKCSRKAAMAFVVPIKNQGII 61
           S+VIL VTHCGFWKCSRKAAMAFVVPI+NQG+I
Sbjct: 15  SSVILEVTHCGFWKCSRKAAMAFVVPIENQGMI 47



 Score = 30.4 bits (67), Expect(2) = 3e-11
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 205 MAKLDILLFQQSQG 164
           MAKLDILLFQQSQG
Sbjct: 1   MAKLDILLFQQSQG 14


>gb|PKY48674.1| hypothetical protein RhiirA4_422353 [Rhizophagus irregularis]
          Length = 115

 Score = 65.5 bits (158), Expect(2) = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -3

Query: 159 SNVILAVTHCGFWKCSRKAAMAFVVPIKNQGII 61
           S+VIL VTHCGFWKCSRKAAMAFVVPI+NQG+I
Sbjct: 15  SSVILEVTHCGFWKCSRKAAMAFVVPIENQGMI 47



 Score = 30.4 bits (67), Expect(2) = 3e-11
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 205 MAKLDILLFQQSQG 164
           MAKLDILLFQQSQG
Sbjct: 1   MAKLDILLFQQSQG 14


>dbj|GBC39169.1| zinc finger bed domain-containing protein ricesleeper 2-like
           [Rhizophagus irregularis DAOM 181602]
          Length = 554

 Score = 54.7 bits (130), Expect(2) = 3e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +1

Query: 163 SPDFAEIVRYLALPYDKNVEALLW*QAHS 249
           SPDFAEI RYL LPYD+NVEALLW QAHS
Sbjct: 459 SPDFAEIERYLTLPYDENVEALLWWQAHS 487



 Score = 23.9 bits (50), Expect(2) = 3e-06
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 5/21 (23%)
 Frame = +2

Query: 86  TTNAIAAFREHF-----QKPQ 133
           TTNAIA  RE F     QKPQ
Sbjct: 404 TTNAIATLREQFSFYLSQKPQ 424


>gb|PKC01454.1| hypothetical protein RhiirA5_381719 [Rhizophagus irregularis]
          Length = 415

 Score = 52.8 bits (125), Expect(2) = 4e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +1

Query: 163 SPDFAEIVRYLALPYDKNVEALLW*QAHS 249
           SPDFAEI RYLALP D+NVEALLW QAHS
Sbjct: 372 SPDFAEIERYLALPCDENVEALLWWQAHS 400



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 14/21 (66%), Positives = 14/21 (66%), Gaps = 5/21 (23%)
 Frame = +2

Query: 86  TTNAIAAFREHF-----QKPQ 133
           TTNAIAA RE F     QKPQ
Sbjct: 317 TTNAIAALREQFSFYLSQKPQ 337


Top