BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00055090
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX76145.1| DEAH-box RNA helicase PRP16 [Rhizophagus irregula...    75   1e-12
dbj|GBC34568.1| pre-mRNA-splicing factor ATP-dependent RNA helic...    61   1e-07

>gb|EXX76145.1| DEAH-box RNA helicase PRP16 [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC34569.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
           [Rhizophagus irregularis DAOM 181602]
          Length = 1322

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 59/164 (35%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487 KSSYRRRTETSLHSNGVLDEARNRLEEYK-EREKFIGGLNXXXXXXXXXXXXXXXXXXXR 311
           KS+YR+RT+    +N VLDEARNRLEE+K ER+++    +                   R
Sbjct: 200 KSNYRKRTD----ANSVLDEARNRLEEHKRERDQYTDNHHKKSHHKDKSDRRDRDDDYGR 255

Query: 310 YESPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGYSRRSPSIAS-IRDGYNRR 134
           YES +                                     SRRSPS+AS IRDGY+RR
Sbjct: 256 YESSRSSRRSPSVSSSRNGSSPSVSSSRRSPSVV-----SSRSRRSPSVASSIRDGYSRR 310

Query: 133 SPSTTSWREGXXXXXXXXXXXXXXXXXXXXXXXSEWDTTSTTST 2
           +PSTTSWREG                       SEWDTT TTST
Sbjct: 311 TPSTTSWREGSSKRSSSLSPWRDSDRSSSRISRSEWDTTPTTST 354


>dbj|GBC34568.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Rhizophagus
           irregularis DAOM 181602]
          Length = 1315

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 184 SRRSPSIAS-IRDGYNRRSPSTTSWREGXXXXXXXXXXXXXXXXXXXXXXXSEWDTTSTT 8
           SRRSPS+AS IRDGY+RR+PSTTSWREG                       SEWDTT TT
Sbjct: 286 SRRSPSVASSIRDGYSRRTPSTTSWREGSSKRSSSLSPWRDSDRSSSRISRSEWDTTPTT 345

Query: 7   ST 2
           ST
Sbjct: 346 ST 347