BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00054438
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX63367.1| Rfa1p [Rhizophagus irregularis DAOM 197198w] >gi|...   264   7e-83
gb|PKY55971.1| replication factor-a protein [Rhizophagus irregul...   263   3e-82

>gb|EXX63367.1| Rfa1p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC41046.1| DNA replication factor A protein1 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC18044.1| replication factor-a protein [Rhizophagus irregularis]
 gb|PKC71946.1| replication factor-a protein [Rhizophagus irregularis]
 gb|PKK68846.1| replication factor-a protein [Rhizophagus irregularis]
 gb|PKY15445.1| replication factor-a protein [Rhizophagus irregularis]
 gb|POG63539.1| hypothetical protein GLOIN_2v1685334 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 619

 Score =  264 bits (675), Expect = 7e-83
 Identities = 133/136 (97%), Positives = 135/136 (99%), Gaps = 1/136 (0%)
 Frame = +3

Query: 48  MSKTNVGSIITLGCIRGMLDENESSRPKNPVLQLVRVNPGVGEQGGSRYKIGLSDGFELI 227
           MSKTNVGSII+LGCIRGMLDENESSRPKNPVLQLVRVNPGVGEQGGSRYKIGLSDGFELI
Sbjct: 1   MSKTNVGSIISLGCIRGMLDENESSRPKNPVLQLVRVNPGVGEQGGSRYKIGLSDGFELI 60

Query: 228 QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNT-KYLVILGFELVKDVPL 404
           QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNT KYLVILGFELVKDVPL
Sbjct: 61  QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNTSKYLVILGFELVKDVPL 120

Query: 405 ELYGHGHLNDDTERSR 452
           ELYGHGHL+DDTERSR
Sbjct: 121 ELYGHGHLSDDTERSR 136


>gb|PKY55971.1| replication factor-a protein [Rhizophagus irregularis]
          Length = 619

 Score =  263 bits (671), Expect = 3e-82
 Identities = 132/136 (97%), Positives = 134/136 (98%), Gaps = 1/136 (0%)
 Frame = +3

Query: 48  MSKTNVGSIITLGCIRGMLDENESSRPKNPVLQLVRVNPGVGEQGGSRYKIGLSDGFELI 227
           MSKTNVGSII+LGCIRGMLDENESSRPKNPVLQLVRVNPG GEQGGSRYKIGLSDGFELI
Sbjct: 1   MSKTNVGSIISLGCIRGMLDENESSRPKNPVLQLVRVNPGAGEQGGSRYKIGLSDGFELI 60

Query: 228 QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNT-KYLVILGFELVKDVPL 404
           QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNT KYLVILGFELVKDVPL
Sbjct: 61  QGIIPEHLIKTVCNGKKLDRGMIIKLTNYNLSNSIPLQASKNTSKYLVILGFELVKDVPL 120

Query: 405 ELYGHGHLNDDTERSR 452
           ELYGHGHL+DDTERSR
Sbjct: 121 ELYGHGHLSDDTERSR 136