BLASTX nr result

ID: Ophiopogon27_contig00054353 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00054353
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX57475.1| hypothetical protein RirG_206840 [Rhizophagus irr...   303   2e-93
gb|PKK73847.1| hypothetical protein RhiirC2_775534 [Rhizophagus ...   292   3e-89

>gb|EXX57475.1| hypothetical protein RirG_206840 [Rhizophagus irregularis DAOM
            197198w]
 gb|EXX57476.1| hypothetical protein RirG_206840 [Rhizophagus irregularis DAOM
            197198w]
 dbj|GBC18665.1| Rab3 GTPase-activating protein non-catalytic subunit [Rhizophagus
            irregularis DAOM 181602]
          Length = 1226

 Score =  303 bits (777), Expect = 2e-93
 Identities = 153/158 (96%), Positives = 154/158 (97%), Gaps = 3/158 (1%)
 Frame = +3

Query: 3    DFSSIATNLESNSISDRIINYCLNTDKIGHALLLSLACQYG---NPLINNYEIDWKSLVD 173
            DFSSIATNLESNSISDRIINYCLNTDKIGHALLLSLACQYG   NPLINNYEIDWKSLVD
Sbjct: 842  DFSSIATNLESNSISDRIINYCLNTDKIGHALLLSLACQYGQYGNPLINNYEIDWKSLVD 901

Query: 174  KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTSIPS 353
            KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTSIP 
Sbjct: 902  KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTSIPP 961

Query: 354  KSDLYWIYRSWTFGQLFKKDTDNTDLLRIAIEQTKFIS 467
            KSDLYWIYRSWTFGQLFKKDT+NTDLLRIAIEQTKFIS
Sbjct: 962  KSDLYWIYRSWTFGQLFKKDTNNTDLLRIAIEQTKFIS 999


>gb|PKK73847.1| hypothetical protein RhiirC2_775534 [Rhizophagus irregularis]
          Length = 1225

 Score =  292 bits (747), Expect = 3e-89
 Identities = 149/158 (94%), Positives = 150/158 (94%), Gaps = 3/158 (1%)
 Frame = +3

Query: 3    DFSSIATNLESNSISDRIINYCLNTDKIGHALLLSLACQYG---NPLINNYEIDWKSLVD 173
            DFSSIATN   NSISDRIINYCLNTDKIGHALLLSLACQYG   NPLINNYEIDWKSLVD
Sbjct: 843  DFSSIATNF--NSISDRIINYCLNTDKIGHALLLSLACQYGQYGNPLINNYEIDWKSLVD 900

Query: 174  KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTSIPS 353
            KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTS P 
Sbjct: 901  KLVNCWNLIKDTPPIIIAEIGLTASNLNKFEKTSLTRITSIKDIRLDEKANSEISTSFPP 960

Query: 354  KSDLYWIYRSWTFGQLFKKDTDNTDLLRIAIEQTKFIS 467
            KSDLYWIYRSWTFGQLFKKDT+NTDLLRIAIEQTKFIS
Sbjct: 961  KSDLYWIYRSWTFGQLFKKDTNNTDLLRIAIEQTKFIS 998


Top