BLASTX nr result

ID: Ophiopogon27_contig00054331 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00054331
         (511 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX79949.1| hypothetical protein RirG_000690 [Rhizophagus irr...   100   2e-24
gb|EXX75529.1| hypothetical protein RirG_041030 [Rhizophagus irr...    99   3e-24

>gb|EXX79949.1| hypothetical protein RirG_000690 [Rhizophagus irregularis DAOM
           197198w]
          Length = 85

 Score =  100 bits (248), Expect = 2e-24
 Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
 Frame = -3

Query: 488 MPG---PKSPTNQSELSADLLQDENYADLNINEILKDIDKAEGALNELDGRLDNLNAKID 318
           MPG   PKSPTNQSELS D + DEN   LNINEILKD+DKAEGALNELD RLDNLNAKID
Sbjct: 1   MPGSASPKSPTNQSELSVDSIIDEN---LNINEILKDMDKAEGALNELDERLDNLNAKID 57

Query: 317 ALLKEQTSKSGNTEEAKSEGKI*RNYF 237
           A+L+EQT K  + ++ K   +  ++Y+
Sbjct: 58  AMLEEQTPKLEDEKKPKPTEEKKQSYY 84


>gb|EXX75529.1| hypothetical protein RirG_041030 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX78608.1| hypothetical protein RirG_013560 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX78618.1| hypothetical protein RirG_013470 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC34345.1| hypothetical protein RIR_1910100 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC11387.1| hypothetical protein RhiirA5_354262 [Rhizophagus irregularis]
 gb|PKC69034.1| hypothetical protein RhiirA1_416222 [Rhizophagus irregularis]
 gb|PKK78287.1| hypothetical protein RhiirC2_730240 [Rhizophagus irregularis]
 gb|PKY17064.1| hypothetical protein RhiirB3_403765 [Rhizophagus irregularis]
 gb|PKY42928.1| hypothetical protein RhiirA4_398120 [Rhizophagus irregularis]
          Length = 82

 Score = 99.4 bits (246), Expect = 3e-24
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
 Frame = -3

Query: 488 MPG---PKSPTNQSELSADLLQDENYADLNINEILKDIDKAEGALNELDGRLDNLNAKID 318
           MPG   PKSPTNQSELS D + DEN   LNINEILKD+DKAEGALNELD RLDNLNAKID
Sbjct: 1   MPGSASPKSPTNQSELSVDSIIDEN---LNINEILKDMDKAEGALNELDERLDNLNAKID 57

Query: 317 ALLKEQTSKSGNTEEAK 267
           A+L+EQT K  + ++ K
Sbjct: 58  AMLEEQTPKLEDEKKPK 74


Top