BLASTX nr result

ID: Ophiopogon27_contig00054239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00054239
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKB99785.1| hypothetical protein RhiirA5_505541 [Rhizophagus ...    42   4e-06
gb|PKY32567.1| hypothetical protein RhiirB3_450842 [Rhizophagus ...    44   7e-06

>gb|PKB99785.1| hypothetical protein RhiirA5_505541 [Rhizophagus irregularis]
          Length = 400

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 68  QGVDRVFEIVTDTSEWYFMECS 3
           Q V+RVF IVTD SEWYFMECS
Sbjct: 324 QDVNRVFGIVTDASEWYFMECS 345



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 22/84 (26%)
 Frame = -2

Query: 264 KYFMSSYSCQPPFRKHQQGIWVTKIIYSYCYLA----------------------RV*RK 151
           KY M+    +       +    TK IYSYCYLA                          K
Sbjct: 239 KYLMAEIKLRQDVTPLNKANEATKSIYSYCYLASGISLYKDNFKLIPEKLIEVKKEDFMK 298

Query: 150 TTIRPSVQMELTLTRKCKADKIDS 79
              + SVQME TL+RK KAD+ID+
Sbjct: 299 GFAQASVQMESTLSRKRKADEIDN 322


>gb|PKY32567.1| hypothetical protein RhiirB3_450842 [Rhizophagus irregularis]
          Length = 431

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -3

Query: 68  QGVDRVFEIVTDTSEWYFMECS 3
           Q VDRVF IVTD SEWYFMECS
Sbjct: 319 QDVDRVFGIVTDASEWYFMECS 340



 Score = 33.5 bits (75), Expect(2) = 7e-06
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 21/61 (34%)
 Frame = -2

Query: 198 TKIIYSYCYLA----------RV*RKTTIR-----------PSVQMELTLTRKCKADKID 82
           TK IYSYCYLA          ++  +  I             SVQME TL+RK KAD+ID
Sbjct: 257 TKSIYSYCYLASGVSLYKDNFKLIPEKLIEGRNGQGNLDYAASVQMESTLSRKRKADEID 316

Query: 81  S 79
           +
Sbjct: 317 N 317


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