BLASTX nr result

ID: Ophiopogon27_contig00054149 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00054149
         (374 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX62018.1| hypothetical protein RirG_165530 [Rhizophagus irr...    78   3e-14

>gb|EXX62018.1| hypothetical protein RirG_165530 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC48889.1| mediator of RNA polymerase II transcription subunit 25-like isoform
           x7 [Rhizophagus irregularis DAOM 181602]
 gb|PKC69292.1| hypothetical protein RhiirA1_504813 [Rhizophagus irregularis]
          Length = 937

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 3/53 (5%)
 Frame = +1

Query: 1   KKLAAFVRFPNAPNPNGGLVLFTNTTNGP---SKLVGLLFLDMPLPLSSPVAS 150
           +K+AAFVRFPNAPNPNGG+VLFTN  NGP   +KLVGLLFLD PLP S+PV S
Sbjct: 745 RKMAAFVRFPNAPNPNGGIVLFTN--NGPGNATKLVGLLFLDTPLPTSAPVLS 795


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