BLASTX nr result

ID: Ophiopogon27_contig00053877 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00053877
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officina...   103   1e-22
ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officina...   103   1e-22
ref|XP_017698772.1| PREDICTED: SCAR-like protein 1 isoform X3 [P...    57   1e-06
ref|XP_008792188.1| PREDICTED: protein SCAR2-like isoform X2 [Ph...    57   1e-06
ref|XP_017698771.1| PREDICTED: protein SCAR2-like isoform X1 [Ph...    57   1e-06

>ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officinalis]
          Length = 1186

 Score =  103 bits (256), Expect = 1e-22
 Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
 Frame = -2

Query: 436 IFPTPQIESKSQFVTSDQASKELSITRAKLKSRHLIGSD-SINYLELLRQVLSPEGNYLS 260
           IF TP+I SK QF+TSDQAS+E   T  KLKSR L GSD + +Y E L QVL P+ N  S
Sbjct: 205 IFSTPKINSKLQFMTSDQASEEFPGTHVKLKSRDLNGSDPTTSYTECLHQVLLPKENCQS 264

Query: 259 KNSNSCSDIMLXXXXXXXXXXEVHGVPFDASADTQKILNQSSIV-DECGMERQRIMVKEL 83
            NSN CS I +          +V+GVPFD SA+  K  NQ  I  D C M ++R+     
Sbjct: 265 NNSNCCSHIKMESIGSSESISDVNGVPFDPSAEIGKCPNQYPIFEDTCQMVKKRV----- 319

Query: 82  PQTLPEHVESTEDSDND 32
               PEH ESTE S+++
Sbjct: 320 ----PEHEESTEGSEDE 332


>ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officinalis]
 gb|ONK62638.1| uncharacterized protein A4U43_C07F6270 [Asparagus officinalis]
          Length = 1187

 Score =  103 bits (256), Expect = 1e-22
 Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
 Frame = -2

Query: 436 IFPTPQIESKSQFVTSDQASKELSITRAKLKSRHLIGSD-SINYLELLRQVLSPEGNYLS 260
           IF TP+I SK QF+TSDQAS+E   T  KLKSR L GSD + +Y E L QVL P+ N  S
Sbjct: 206 IFSTPKINSKLQFMTSDQASEEFPGTHVKLKSRDLNGSDPTTSYTECLHQVLLPKENCQS 265

Query: 259 KNSNSCSDIMLXXXXXXXXXXEVHGVPFDASADTQKILNQSSIV-DECGMERQRIMVKEL 83
            NSN CS I +          +V+GVPFD SA+  K  NQ  I  D C M ++R+     
Sbjct: 266 NNSNCCSHIKMESIGSSESISDVNGVPFDPSAEIGKCPNQYPIFEDTCQMVKKRV----- 320

Query: 82  PQTLPEHVESTEDSDND 32
               PEH ESTE S+++
Sbjct: 321 ----PEHEESTEGSEDE 333


>ref|XP_017698772.1| PREDICTED: SCAR-like protein 1 isoform X3 [Phoenix dactylifera]
          Length = 1732

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
 Frame = -2

Query: 424 PQIESKSQFVTSDQASKELSITRAKLKSRHLIGSDSIN---YLELLRQVLSPEGNYLSKN 254
           P   S  Q ++SDQ S E ++ R +LKSRH  G +  N    +E L ++ S E N L  N
Sbjct: 208 PHANSDLQAISSDQVS-EKTLRRVRLKSRHFNGMERSNERRLMEHLLEIHSSEQNILFGN 266

Query: 253 SNSCSDIMLXXXXXXXXXXEVHGVPFDASADTQKI--LN--QSSIVDECG------MERQ 104
           S S S + +          E+H +  DASAD   +  LN  QS I  E        +E Q
Sbjct: 267 SVSYSHVKVNSIDSNESAPEIHEIVVDASADLPLVGGLNPIQSPIKKEVAGLSSYELETQ 326

Query: 103 RIMVKELPQTLPEHVESTEDSDNDYL 26
           +I  KEL + L +       +D+DYL
Sbjct: 327 KIKNKELSEALHDSFGELRKTDSDYL 352


>ref|XP_008792188.1| PREDICTED: protein SCAR2-like isoform X2 [Phoenix dactylifera]
          Length = 1740

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
 Frame = -2

Query: 424 PQIESKSQFVTSDQASKELSITRAKLKSRHLIGSDSIN---YLELLRQVLSPEGNYLSKN 254
           P   S  Q ++SDQ S E ++ R +LKSRH  G +  N    +E L ++ S E N L  N
Sbjct: 208 PHANSDLQAISSDQVS-EKTLRRVRLKSRHFNGMERSNERRLMEHLLEIHSSEQNILFGN 266

Query: 253 SNSCSDIMLXXXXXXXXXXEVHGVPFDASADTQKI--LN--QSSIVDECG------MERQ 104
           S S S + +          E+H +  DASAD   +  LN  QS I  E        +E Q
Sbjct: 267 SVSYSHVKVNSIDSNESAPEIHEIVVDASADLPLVGGLNPIQSPIKKEVAGLSSYELETQ 326

Query: 103 RIMVKELPQTLPEHVESTEDSDNDYL 26
           +I  KEL + L +       +D+DYL
Sbjct: 327 KIKNKELSEALHDSFGELRKTDSDYL 352


>ref|XP_017698771.1| PREDICTED: protein SCAR2-like isoform X1 [Phoenix dactylifera]
          Length = 1770

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
 Frame = -2

Query: 424 PQIESKSQFVTSDQASKELSITRAKLKSRHLIGSDSIN---YLELLRQVLSPEGNYLSKN 254
           P   S  Q ++SDQ S E ++ R +LKSRH  G +  N    +E L ++ S E N L  N
Sbjct: 208 PHANSDLQAISSDQVS-EKTLRRVRLKSRHFNGMERSNERRLMEHLLEIHSSEQNILFGN 266

Query: 253 SNSCSDIMLXXXXXXXXXXEVHGVPFDASADTQKI--LN--QSSIVDECG------MERQ 104
           S S S + +          E+H +  DASAD   +  LN  QS I  E        +E Q
Sbjct: 267 SVSYSHVKVNSIDSNESAPEIHEIVVDASADLPLVGGLNPIQSPIKKEVAGLSSYELETQ 326

Query: 103 RIMVKELPQTLPEHVESTEDSDNDYL 26
           +I  KEL + L +       +D+DYL
Sbjct: 327 KIKNKELSEALHDSFGELRKTDSDYL 352


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