BLASTX nr result

ID: Ophiopogon27_contig00053523 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00053523
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY20538.1| hypothetical protein RhiirB3_433852 [Rhizophagus ...    53   9e-06

>gb|PKY20538.1| hypothetical protein RhiirB3_433852 [Rhizophagus irregularis]
          Length = 197

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 38/121 (31%), Positives = 59/121 (48%)
 Frame = +1

Query: 37  ARRSKRAATVSSQSIVEYSDSSNDEGLYVPLNAPELLSSSASSFNLEDTKALNVTFIGSE 216
           AR+S   +  S+Q I   S S+ D      L  P  LS+  S FN  D ++LNVTF  + 
Sbjct: 42  ARKSASGSKKSTQQIASGSGSTEDSE---HLRDPNFLSNFVSLFNPRDRRSLNVTFRPAR 98

Query: 217 DQDSVVPGLSDVNDTEIPTQLLLPDISKKDFIIDDVNEVDDLELSDDAKSFFFQMSTMVQ 396
               V+P   +VN  +     +LP+I + D     +N +D+L   +  K+F F++   V 
Sbjct: 99  RVAEVIPTYLNVNIPQEAKAYILPEIKRSDLEKLHIN-IDELSNDNIIKAFIFKLHQAVI 157

Query: 397 N 399
           N
Sbjct: 158 N 158


Top