BLASTX nr result

ID: Ophiopogon27_contig00053334 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00053334
         (422 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC16854.1| guanyl-nucleotide exchange factor sec2 [Rhizopha...   125   9e-31
gb|EXX61443.1| Sec2p [Rhizophagus irregularis DAOM 197198w] >gi|...   125   1e-30

>dbj|GBC16854.1| guanyl-nucleotide exchange factor sec2 [Rhizophagus irregularis
           DAOM 181602]
          Length = 539

 Score =  125 bits (313), Expect = 9e-31
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
 Frame = +2

Query: 59  MTEAEPPTFPVTNGTKEYKTKDIEELRSRLQTSIKKTESSSPNILPNTDLISNATLEE-- 232
           MTEAEPPT PVTNG K+Y  KDIE+L +R+Q  I K   SSP +  NTD I +  LEE  
Sbjct: 1   MTEAEPPTIPVTNGAKDYTAKDIEKLHARIQAVIDKPPVSSPKVQSNTDSIPSVVLEESA 60

Query: 233 EPVKKLDSLDDQSLTSVNTAIDSYENDETKKTVIEGDSEKCYCQNLSINPGTACCSKCER 412
           +   +  SL+DQ LTS +T I + EN+     VIE D ++CYCQ LSI PGTA C++CER
Sbjct: 61  KVSNESGSLNDQLLTSADTTIKACENE-----VIENDLKECYCQKLSIIPGTANCNRCER 115

Query: 413 VVP 421
           VVP
Sbjct: 116 VVP 118


>gb|EXX61443.1| Sec2p [Rhizophagus irregularis DAOM 197198w]
 gb|PKK78911.1| hypothetical protein RhiirC2_728435 [Rhizophagus irregularis]
 gb|POG80369.1| hypothetical protein GLOIN_2v1517731 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 597

 Score =  125 bits (313), Expect = 1e-30
 Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
 Frame = +2

Query: 59  MTEAEPPTFPVTNGTKEYKTKDIEELRSRLQTSIKKTESSSPNILPNTDLISNATLEE-- 232
           MTEAEPPT PVTNG K+Y  KDIE+L +R+Q  I K   SSP +  NTD I +  LEE  
Sbjct: 1   MTEAEPPTIPVTNGAKDYTAKDIEKLHARIQAVIDKPPVSSPKVQSNTDSIPSVVLEESA 60

Query: 233 EPVKKLDSLDDQSLTSVNTAIDSYENDETKKTVIEGDSEKCYCQNLSINPGTACCSKCER 412
           +   +  SL+DQ LTS +T I + EN+     VIE D ++CYCQ LSI PGTA C++CER
Sbjct: 61  KVSNESGSLNDQLLTSADTTIKACENE-----VIENDLKECYCQKLSIIPGTANCNRCER 115

Query: 413 VVP 421
           VVP
Sbjct: 116 VVP 118


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