BLASTX nr result

ID: Ophiopogon27_contig00053231 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00053231
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52671.1| hypothetical protein RirG_251040 [Rhizophagus irr...    58   3e-07
gb|EXX52672.1| hypothetical protein RirG_251040 [Rhizophagus irr...    57   6e-07

>gb|EXX52671.1| hypothetical protein RirG_251040 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKC06991.1| hypothetical protein RhiirA5_418836 [Rhizophagus irregularis]
          Length = 301

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 287 MSSPATIPRAFINMSSSPIIDLTISPMSV-RTQAVEVVFISDTEDEXXXXXXXXXXXXXX 111
           MSSPATIPR FINMS+S  IDLT++P+ V RT   +++ IS++EDE              
Sbjct: 1   MSSPATIPRTFINMSASSPIDLTMTPLPVRRTPVTDIIIISESEDE--NNDSSHRNNSNY 58

Query: 110 XXXXXXXXXXXLGFDNQNIF 51
                      LGFD+QNIF
Sbjct: 59  RFNDNNNPNSMLGFDSQNIF 78


>gb|EXX52672.1| hypothetical protein RirG_251040 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC25301.1| sumo-targeted ubiquitin-protein ligase subunit rfp1 [Rhizophagus
           irregularis DAOM 181602]
          Length = 266

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = -3

Query: 287 MSSPATIPRAFINMSSSPIIDLTISPMSV-RTQAVEVVFISDTEDE 153
           MSSPATIPR FINMS+S  IDLT++P+ V RT   +++ IS++EDE
Sbjct: 1   MSSPATIPRTFINMSASSPIDLTMTPLPVRRTPVTDIIIISESEDE 46


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