BLASTX nr result

ID: Ophiopogon27_contig00053090 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00053090
         (516 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC49262.1| Mediator of RNA polymerase II transcription subu...   334   e-108
gb|EXX54781.1| hypothetical protein RirG_231410 [Rhizophagus irr...   334   e-104
gb|POG75554.1| hypothetical protein GLOIN_2v951814 [Rhizophagus ...   301   e-101

>dbj|GBC49262.1| Mediator of RNA polymerase II transcription subunit 14 [Rhizophagus
            irregularis DAOM 181602]
          Length = 787

 Score =  334 bits (856), Expect = e-108
 Identities = 169/171 (98%), Positives = 171/171 (100%)
 Frame = +2

Query: 2    ACEDKLSFDHNKLVEVLIVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI 181
            ACEDKLS+DHNKLVEVL+VLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI
Sbjct: 533  ACEDKLSYDHNKLVEVLVVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI 592

Query: 182  ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK 361
            ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK
Sbjct: 593  ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK 652

Query: 362  EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 514
            EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK
Sbjct: 653  EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 703


>gb|EXX54781.1| hypothetical protein RirG_231410 [Rhizophagus irregularis DAOM
            197198w]
 gb|PKC74441.1| MED14-domain-containing protein [Rhizophagus irregularis]
          Length = 1184

 Score =  334 bits (856), Expect = e-104
 Identities = 169/171 (98%), Positives = 171/171 (100%)
 Frame = +2

Query: 2    ACEDKLSFDHNKLVEVLIVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI 181
            ACEDKLS+DHNKLVEVL+VLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI
Sbjct: 558  ACEDKLSYDHNKLVEVLVVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKI 617

Query: 182  ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK 361
            ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK
Sbjct: 618  ILEFNDVKDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVK 677

Query: 362  EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 514
            EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK
Sbjct: 678  EPSHKITSVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 728


>gb|POG75554.1| hypothetical protein GLOIN_2v951814 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 284

 Score =  301 bits (770), Expect = e-101
 Identities = 155/164 (94%), Positives = 158/164 (96%)
 Frame = +2

Query: 23  FDHNKLVEVLIVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKIILEFNDV 202
           F  ++  E+  VLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKIILEFNDV
Sbjct: 86  FIEDEKQEIDSVLRSVVMISRLESMARKLFLDVPREIQLRPEDNMKLRTNQKIILEFNDV 145

Query: 203 KDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVKEPSHKIT 382
           KDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVKEPSHKIT
Sbjct: 146 KDVKKMLMLPHEGIHDKLNYLIAGLVENGIVFSLAELSRMTSSGKFLLSDLVKEPSHKIT 205

Query: 383 SVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 514
           SVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK
Sbjct: 206 SVRSIRLGNTVFDFEKLRADSKLPRQFLSDPMKYRYLNEYNHRK 249


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