BLASTX nr result
ID: Ophiopogon27_contig00052914
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00052914
(502 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020245105.1| uncharacterized protein LOC109823228 [Aspara... 71 9e-17
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 62 2e-12
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 58 9e-12
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 64 1e-11
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|... 69 8e-11
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 63 3e-10
gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagu... 62 6e-09
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 62 6e-08
dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subt... 60 2e-07
gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subc... 56 3e-07
gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sa... 56 3e-07
emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera] 58 1e-06
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-06
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera] 57 2e-06
gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group] 56 2e-06
gb|ABA97882.1| transposon protein, putative, unclassified [Oryza... 54 2e-06
>ref|XP_020245105.1| uncharacterized protein LOC109823228 [Asparagus officinalis]
Length = 158
Score = 70.9 bits (172), Expect(2) = 9e-17
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIG 8
E +PTT+++AE SE+DLW+ AM EEMKSLH NN EL ELPKG+KTIG
Sbjct: 110 EMVPTTYREAEQISETDLWQKAMQEEMKSLHMNNTWELVELPKGRKTIG 158
Score = 43.5 bits (101), Expect(2) = 9e-17
Identities = 17/37 (45%), Positives = 30/37 (81%)
Frame = -2
Query: 261 QIQDLIAIRKPKRNIKKPAIFDNMVIAYVLPVESVEK 151
Q+QDLI + + +R+I+ PA++ N+V+ Y LPVES+++
Sbjct: 74 QVQDLIVVWRLRRDIRLPAMYMNIVVVYALPVESIDE 110
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 61.6 bits (148), Expect(2) = 2e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ IP+T+ +A +SSES W AM EEM+SL KN +LA+LPKGKK IGCK
Sbjct: 787 DDIPSTYPEAIMSSESGNWAGAMEEEMQSLKKNKTWKLAQLPKGKKAIGCK 837
Score = 38.1 bits (87), Expect(2) = 2e-12
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -2
Query: 309 EISAESIEPNQESQQDQIQDLIAIRKPKRNIKKPAIFDNMVIAYVLPV 166
E S E P QESQQ IA+R+ +R+I+KP+ F +MV AY LPV
Sbjct: 741 EESDEEEVPTQESQQQSAP--IAVRRQRRDIQKPSRFMDMV-AYALPV 785
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 58.2 bits (139), Expect(2) = 9e-12
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ IP+T+ LSSES W AM EEM+SL KN +L +LPKGKK IGCK
Sbjct: 733 DDIPSTYPGVILSSESGNWAGAMEEEMQSLKKNKTWKLTQLPKGKKAIGCK 783
Score = 39.3 bits (90), Expect(2) = 9e-12
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -2
Query: 309 EISAESIEPNQESQQDQIQDLIAIRKPKRNIKKPAIFDNMVIAYVLPV 166
E S E P QESQQ IA+R+ +R+I+KPA F +MV AY LPV
Sbjct: 687 EESDEEEVPTQESQQQSAP--IAVRRQRRDIQKPARFMDMV-AYALPV 731
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 63.5 bits (153), Expect(2) = 1e-11
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ +P+T+ KA +S+S W+ AM EEM+SLHKN EL LPKGKK IGCK
Sbjct: 546 DDVPSTYTKARSNSDSVKWKQAMNEEMQSLHKNRTWELVTLPKGKKAIGCK 596
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 297 ESIEPNQESQQDQIQ--DLIAIRKPKRNIKKPAIFDNMVIAYVL 172
E + S Q+ +Q D IA R+P+R I+ PA FD+MV AY L
Sbjct: 499 EGTNDEEVSTQELLQQHDSIAYRRPRREIRMPARFDDMV-AYAL 541
>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
Length = 324
Score = 69.3 bits (168), Expect = 8e-11
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ +PTT+K A SSE D WRIAM EEM+SL++N+ +LA LPKGKK IGCK
Sbjct: 107 DDVPTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCK 157
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 63.2 bits (152), Expect(2) = 3e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ IPTT+ +A SE D WR AM EEM+SL +N +LA LPKGKK IGCK
Sbjct: 576 DDIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCK 626
Score = 29.3 bits (64), Expect(2) = 3e-10
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -2
Query: 336 RYSVYKA*SEISAESIEPNQESQQDQIQD------LIAIRKPKRNIKKPAIFDNMVIAYV 175
R V+ A E ++ + ++ IQ+ IA+RKPKR PA + +MV +Y
Sbjct: 512 RKIVFPANDEEKTPMVDEESDEEEVHIQEPPQQLESIALRKPKRTTIMPARYVDMV-SYA 570
Query: 174 LPVES 160
PV S
Sbjct: 571 SPVAS 575
>gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagus officinalis]
Length = 162
Score = 62.0 bits (149), Expect = 6e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
+ +P+TF++AE SS S W AM EE++SL KN+ +LA+LPKGKK IGCK
Sbjct: 55 DMVPSTFREAESSSNSIRWMEAMEEEIRSLQKNDTWKLAKLPKGKKAIGCK 105
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 61.6 bits (148), Expect = 6e-08
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -1
Query: 145 PTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
P+TF++A +S E D W AM+EEM+SL KN EL +LP GK+TIGCK
Sbjct: 729 PSTFREAIVSQEKDKWMGAMMEEMESLQKNQTWELVQLPMGKRTIGCK 776
>dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subterraneum]
Length = 887
Score = 60.1 bits (144), Expect = 2e-07
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = -1
Query: 145 PTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
P+TF++A S E + W AM+EEM+SL KN EL +LPKGK+ IGCK
Sbjct: 471 PSTFREAMASQEKERWMGAMMEEMESLQKNQTWELVQLPKGKRVIGCK 518
>gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1884
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
E PT++++A S+ S W AM +EMKS+ NN+ +L E+PKG KT+GCK
Sbjct: 758 EDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCK 808
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Frame = -2
Query: 285 PNQESQQD-QIQDLIAIRKPKRN--IKKPAIFDN 193
P QE+QQ+ Q+QD+ ++ P+R+ +K+ AI D+
Sbjct: 713 PVQETQQEPQVQDVPNVQAPRRSERVKRSAIRDD 746
>gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1787
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
E PT++++A S+ S W AM +EMKS+ NN+ +L E+PKG KT+GCK
Sbjct: 758 EDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCK 808
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Frame = -2
Query: 285 PNQESQQD-QIQDLIAIRKPKRN--IKKPAIFDN 193
P QE+QQ+ Q+QD+ ++ P+R+ +K+ AI D+
Sbjct: 713 PVQETQQEPQVQDVPNVQAPRRSERVKRSAIRDD 746
>emb|CAN62509.1| hypothetical protein VITISV_039839 [Vitis vinifera]
Length = 1154
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
ES PT++ +A S S LW AM EE+KS+ N + +L ELPKG KTIGCK
Sbjct: 354 ESDPTSYNQAINSENSTLWLYAMEEELKSMKDNEVWDLVELPKGIKTIGCK 404
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -1
Query: 211 ASHI**HGHCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAEL 32
ASH +C+ T E P+TF++A SS+ W AM EE+++LH+N EL +L
Sbjct: 725 ASH---DAYCLLTE-----EGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDL 776
Query: 31 PKGKKTIGCK 2
PKG+K IGCK
Sbjct: 777 PKGRKAIGCK 786
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -1
Query: 211 ASHI**HGHCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAEL 32
ASH +C+ T E P+TF++A SS+ W AM EE+++LH+N EL +L
Sbjct: 725 ASH---DAYCLLTE-----EGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDL 776
Query: 31 PKGKKTIGCK 2
PKG+K IGCK
Sbjct: 777 PKGRKAIGCK 786
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -1
Query: 211 ASHI**HGHCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAEL 32
ASH +C+ T E P+TF++A SS+ W AM EE+++LH+N EL +L
Sbjct: 725 ASH---DAYCLLTE-----EGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDL 776
Query: 31 PKGKKTIGCK 2
PKG+K IGCK
Sbjct: 777 PKGRKAIGCK 786
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -1
Query: 211 ASHI**HGHCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAEL 32
ASH +C+ T E P+TF++A SS+ W AM EE+++LH+N EL +L
Sbjct: 774 ASH---DAYCLLTE-----EGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDL 825
Query: 31 PKGKKTIGCK 2
PKG+K IGCK
Sbjct: 826 PKGRKAIGCK 835
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 57.8 bits (138), Expect = 1e-06
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -1
Query: 211 ASHI**HGHCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAEL 32
ASH +C+ T E P+TF++A SS+ W AM EE+++LH+N EL +L
Sbjct: 774 ASH---DAYCLLTE-----EGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDL 825
Query: 31 PKGKKTIGCK 2
PKG+K IGCK
Sbjct: 826 PKGRKAIGCK 835
>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
Length = 815
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -1
Query: 187 HCVCTSSRKC*ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIG 8
+ + TSSR TTF++A+ S E W ++EE++SLHKN +L ELPKGK+ IG
Sbjct: 383 YALITSSRDS-----TTFQEAKHSQEKSRWVGVVVEEIQSLHKNQTWDLVELPKGKRAIG 437
Query: 7 CK 2
CK
Sbjct: 438 CK 439
>gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1362
Score = 55.8 bits (133), Expect(2) = 2e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
E PT++++A S+ S W AM +EMKS+ NN+ +L E+PKG KT+GCK
Sbjct: 840 EDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCK 890
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Frame = -2
Query: 285 PNQESQQD-QIQDLIAIRKPKRN--IKKPAIFDN 193
P QE+ Q+ Q+QD+ ++ P+R+ +++ AI D+
Sbjct: 795 PVQETHQEPQVQDVPNVQAPRRSERVRRSAIRDD 828
>gb|ABA97882.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 308
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1
Query: 154 ESIPTTFKKAELSSESDLWRIAMIEEMKSLHKNNICELAELPKGKKTIGCK 2
E PT++++A S+ S W AM +EMKS+ N++ +L E+PKG KT+GCK
Sbjct: 231 EDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCK 281
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Frame = -2
Query: 285 PNQESQQD-QIQDLIAIRKPKRN--IKKPAIFDN 193
P QE+QQ+ Q+QD+ ++ P+R+ +++ AI D+
Sbjct: 186 PVQETQQEPQVQDVPNVQAPRRSERVRRSAIRDD 219