BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052825
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC29154.1| retrotransposable element [Rhizophagus irregular...    56   1e-07
dbj|GBC27215.1| retrotransposable element [Rhizophagus irregular...    56   1e-07
dbj|GBC41221.1| retrotransposable element [Rhizophagus irregular...    56   1e-07

>dbj|GBC29154.1| retrotransposable element [Rhizophagus irregularis DAOM 181602]
          Length = 743

 Score = 55.8 bits (133), Expect(2) = 1e-07
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = -2

Query: 341 KLAFITQYDTYQFLGMLFGLCNAMATFQRLMN 246
           K AFITQY TYQFL M FGLCNA ATFQRLMN
Sbjct: 502 KTAFITQYGTYQFLVMPFGLCNAPATFQRLMN 533



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 393 HTSYGSTKVIASGYWQVEV 337
           H S+ ++  +ASGYWQVEV
Sbjct: 477 HVSWYTSLDLASGYWQVEV 495


>dbj|GBC27215.1| retrotransposable element [Rhizophagus irregularis DAOM 181602]
          Length = 368

 Score = 55.8 bits (133), Expect(2) = 1e-07
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = -2

Query: 341 KLAFITQYDTYQFLGMLFGLCNAMATFQRLMN 246
           K AFITQY TYQFL M FGLCNA ATFQRLMN
Sbjct: 58  KTAFITQYGTYQFLVMPFGLCNAPATFQRLMN 89



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 393 HTSYGSTKVIASGYWQVEV 337
           H S+ ++  +ASGYWQVEV
Sbjct: 33  HVSWYTSLDLASGYWQVEV 51


>dbj|GBC41221.1| retrotransposable element [Rhizophagus irregularis DAOM 181602]
          Length = 265

 Score = 55.8 bits (133), Expect(2) = 1e-07
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = -2

Query: 341 KLAFITQYDTYQFLGMLFGLCNAMATFQRLMN 246
           K AFITQY TYQFL M FGLCNA ATFQRLMN
Sbjct: 32  KTAFITQYGTYQFLVMPFGLCNAPATFQRLMN 63



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 393 HTSYGSTKVIASGYWQVEV 337
           H S+ ++  +ASGYWQVEV
Sbjct: 7   HVSWYTSLDLASGYWQVEV 25