BLASTX nr result

ID: Ophiopogon27_contig00052797 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052797
         (380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX53016.1| Hbs1p [Rhizophagus irregularis DAOM 197198w]            85   2e-16
dbj|GBC15509.1| Elongation factor 1 alpha-like protein [Rhizopha...    57   1e-06

>gb|EXX53016.1| Hbs1p [Rhizophagus irregularis DAOM 197198w]
          Length = 677

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
 Frame = +2

Query: 2   YDTEDTVAYLLDELHKSKAKKETIPRXXXXXXXXXXXXAGSNSNGFSFNEPSPDDVVLKA 181
           Y+TEDT+AYLLDE+HKSKA K++  +            AGSN++GF+FN PSPDD  LKA
Sbjct: 75  YNTEDTIAYLLDEVHKSKANKKS-QKKLGSNKTIPVKKAGSNNSGFAFNTPSPDDTALKA 133

Query: 182 RSQ--GGSIQKDKVXXXXXXXXXXXXXXPVLKATPKSEPKEKQLISVSLDEE 331
           + Q   G+++                  P+LK   K E KEKQL +V L+E+
Sbjct: 134 QRQRNTGTLKDKAKQDVSSTSSNASASSPILKTAQKPESKEKQLTTVLLEED 185


>dbj|GBC15509.1| Elongation factor 1 alpha-like protein [Rhizophagus irregularis
           DAOM 181602]
          Length = 1007

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +2

Query: 116 AGSNSNGFSFNEPSPDDVVLKARSQ--GGSIQKDKVXXXXXXXXXXXXXXPVLKATPKSE 289
           AGSN++GF+FN PSPDD  LKA+ Q   G+++                  P+LK   K E
Sbjct: 463 AGSNNSGFAFNTPSPDDTALKAQRQRNTGTLKDKAKQDVSSTSSNASASSPILKTAQKPE 522

Query: 290 PKEKQLISVSLDEE 331
            KEKQL +V L+E+
Sbjct: 523 SKEKQLTTVLLEED 536


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