BLASTX nr result
ID: Ophiopogon27_contig00052571
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00052571
(460 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKC64212.1| RdRP-domain-containing protein [Rhizophagus irreg... 234 8e-71
gb|PKC10915.1| RdRP-domain-containing protein [Rhizophagus irreg... 234 8e-71
gb|PKY46455.1| RdRP-domain-containing protein [Rhizophagus irreg... 233 2e-70
dbj|GBC38657.1| RNA-dependent RNA polymerase [Rhizophagus irregu... 234 1e-69
gb|EXX58719.1| hypothetical protein RirG_195430 [Rhizophagus irr... 234 7e-69
gb|PKK74498.1| RdRP-domain-containing protein [Rhizophagus irreg... 234 8e-69
gb|PKY47116.1| RdRP-domain-containing protein [Rhizophagus irreg... 194 2e-54
gb|PKC75701.1| RdRP-domain-containing protein [Rhizophagus irreg... 194 2e-54
gb|PKC11905.1| RdRP-domain-containing protein [Rhizophagus irreg... 194 2e-54
gb|PKK79460.1| RdRP-domain-containing protein [Rhizophagus irreg... 192 8e-54
gb|EXX58351.1| hypothetical protein RirG_198780 [Rhizophagus irr... 164 4e-46
dbj|GBC38743.1| RNA-dependent RNA polymerase [Rhizophagus irregu... 165 3e-44
gb|POG67493.1| hypothetical protein GLOIN_2v1646639 [Rhizophagus... 158 4e-42
gb|PKY42614.1| RdRP-domain-containing protein [Rhizophagus irreg... 158 6e-42
gb|PKK77088.1| RdRP-domain-containing protein [Rhizophagus irreg... 158 6e-42
gb|PKC12901.1| RdRP-domain-containing protein [Rhizophagus irreg... 158 6e-42
dbj|GBC42804.1| RNA-dependent RNA polymerase [Rhizophagus irregu... 158 6e-42
gb|POG77563.1| RNA dependent RNA polymerase-domain-containing pr... 156 4e-41
emb|CDW77053.1| rna-directed rna polymerase [Stylonychia lemnae] 105 3e-23
gb|AJA90770.1| RNA-dependent RNA polymerase 2 [Ephedra trifurca] 103 1e-22
>gb|PKC64212.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 689
Score = 234 bits (598), Expect = 8e-71
Identities = 115/123 (93%), Positives = 120/123 (97%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 257 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 316
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV+VPELSHLKNCVVFSQKG+KPLP
Sbjct: 317 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVEVPELSHLKNCVVFSQKGYKPLP 376
Query: 398 NLL 406
NLL
Sbjct: 377 NLL 379
>gb|PKC10915.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKY16206.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|POG65097.1| RNA dependent RNA polymerase-domain-containing protein [Rhizophagus
irregularis DAOM 181602=DAOM 197198]
Length = 689
Score = 234 bits (598), Expect = 8e-71
Identities = 115/123 (93%), Positives = 120/123 (97%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 257 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 316
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV+VPELSHLKNCVVFSQKG+KPLP
Sbjct: 317 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVEVPELSHLKNCVVFSQKGYKPLP 376
Query: 398 NLL 406
NLL
Sbjct: 377 NLL 379
>gb|PKY46455.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 689
Score = 233 bits (595), Expect = 2e-70
Identities = 115/123 (93%), Positives = 119/123 (96%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 257 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 316
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV VPELSHLKNCVVFSQKG+KPLP
Sbjct: 317 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVDVPELSHLKNCVVFSQKGNKPLP 376
Query: 398 NLL 406
NLL
Sbjct: 377 NLL 379
>dbj|GBC38657.1| RNA-dependent RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 872
Score = 234 bits (598), Expect = 1e-69
Identities = 115/123 (93%), Positives = 120/123 (97%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 440 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 499
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV+VPELSHLKNCVVFSQKG+KPLP
Sbjct: 500 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVEVPELSHLKNCVVFSQKGYKPLP 559
Query: 398 NLL 406
NLL
Sbjct: 560 NLL 562
>gb|EXX58719.1| hypothetical protein RirG_195430 [Rhizophagus irregularis DAOM
197198w]
Length = 1111
Score = 234 bits (598), Expect = 7e-69
Identities = 115/123 (93%), Positives = 120/123 (97%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 679 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 738
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV+VPELSHLKNCVVFSQKG+KPLP
Sbjct: 739 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVEVPELSHLKNCVVFSQKGYKPLP 798
Query: 398 NLL 406
NLL
Sbjct: 799 NLL 801
>gb|PKK74498.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1149
Score = 234 bits (598), Expect = 8e-69
Identities = 115/123 (93%), Positives = 120/123 (97%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F FLECKRIFTLKLLR+KARILVPDSFLLIGVIDETGILEENEIYVQTSTI+SEYQTF
Sbjct: 717 FLNAFLECKRIFTLKLLRSKARILVPDSFLLIGVIDETGILEENEIYVQTSTIVSEYQTF 776
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
DTAHEKIQREQKIW+GPAVITRNPCLHPGDLRKVVAV+VPELSHLKNCVVFSQKG+KPLP
Sbjct: 777 DTAHEKIQREQKIWKGPAVITRNPCLHPGDLRKVVAVEVPELSHLKNCVVFSQKGYKPLP 836
Query: 398 NLL 406
NLL
Sbjct: 837 NLL 839
>gb|PKY47116.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1178
Score = 194 bits (492), Expect = 2e-54
Identities = 91/123 (73%), Positives = 108/123 (87%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F + LECKR+F LK LR KARIL+P SFLL+GVIDE+GILEE EI++QTSTI+SE+QTF
Sbjct: 720 FLKALLECKRVFALKSLRYKARILMPKSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTF 779
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
D+A+ K+QRE K+W G A+ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLP
Sbjct: 780 DSANNKVQREHKVWTGQAMITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLP 839
Query: 398 NLL 406
NLL
Sbjct: 840 NLL 842
>gb|PKC75701.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1182
Score = 194 bits (492), Expect = 2e-54
Identities = 91/123 (73%), Positives = 108/123 (87%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F + LECKR+F LK LR KARIL+P SFLL+GVIDE+GILEE EI++QTSTI+SE+QTF
Sbjct: 724 FLKALLECKRVFALKSLRYKARILMPKSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTF 783
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
D+A+ K+QRE K+W G A+ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLP
Sbjct: 784 DSANNKVQREHKVWTGQAMITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLP 843
Query: 398 NLL 406
NLL
Sbjct: 844 NLL 846
>gb|PKC11905.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKY14401.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1182
Score = 194 bits (492), Expect = 2e-54
Identities = 91/123 (73%), Positives = 108/123 (87%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F + LECKR+F LK LR KARIL+P SFLL+GVIDE+GILEE EI++QTSTI+SE+QTF
Sbjct: 724 FLKALLECKRVFALKSLRYKARILMPKSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTF 783
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
D+A+ K+QRE K+W G A+ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLP
Sbjct: 784 DSANNKVQREHKVWTGQAMITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLP 843
Query: 398 NLL 406
NLL
Sbjct: 844 NLL 846
>gb|PKK79460.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1182
Score = 192 bits (488), Expect = 8e-54
Identities = 90/123 (73%), Positives = 108/123 (87%)
Frame = +2
Query: 38 F*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTF 217
F + LECKR+F LK LR KARIL+P SFLL+GVIDE+GILEE EI++QTSTI+SE+QTF
Sbjct: 724 FLKALLECKRVFALKSLRYKARILMPKSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTF 783
Query: 218 DTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLP 397
D+A+ K+QR+ K+W G A+ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLP
Sbjct: 784 DSANNKVQRKHKVWTGQAMITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLP 843
Query: 398 NLL 406
NLL
Sbjct: 844 NLL 846
>gb|EXX58351.1| hypothetical protein RirG_198780 [Rhizophagus irregularis DAOM
197198w]
Length = 435
Score = 164 bits (416), Expect = 4e-46
Identities = 75/99 (75%), Positives = 90/99 (90%)
Frame = +2
Query: 110 VPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTFDTAHEKIQREQKIWEGPAVITRNP 289
+P SFLL+GVIDE+GILEE EI++QTSTI+SE+QTFD+A+ K+QRE K+W G A+ITRNP
Sbjct: 1 MPKSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTFDSANNKVQREHKVWTGQAMITRNP 60
Query: 290 CLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLPNLL 406
CLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLPNLL
Sbjct: 61 CLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLPNLL 99
>dbj|GBC38743.1| RNA-dependent RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 1152
Score = 165 bits (417), Expect = 3e-44
Identities = 78/117 (66%), Positives = 95/117 (81%)
Frame = +2
Query: 56 ECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTFDTAHEK 235
EC + L A ++ SFLL+GVIDE+GILEE EI++QTSTI+SE+QTFD+A+ K
Sbjct: 700 ECSHVMRTILSMIDAGMMRGTSFLLLGVIDESGILEEGEIFIQTSTIVSEHQTFDSANNK 759
Query: 236 IQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLPNLL 406
+QRE K+W G A+ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLPNLL
Sbjct: 760 VQREHKVWTGQAMITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLPNLL 816
>gb|POG67493.1| hypothetical protein GLOIN_2v1646639 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 794
Score = 158 bits (400), Expect = 4e-42
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = +2
Query: 23 GRMIYF*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIIS 202
G + F + LECKR++TLK L+ KARIL+P+SFLL+GVIDETGILEE+EIYVQTSTI+S
Sbjct: 362 GNIDPFLKAILECKRVYTLKSLKYKARILMPNSFLLLGVIDETGILEEDEIYVQTSTIVS 421
Query: 203 EYQTFDTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKV-VAVKVPELSHLKNCVVFSQK 379
E QT + K W PA+I RNPCLHPGD+R V V V V ELSHLKNCVVFSQK
Sbjct: 422 EQQT---------SKSKDWI-PAIIARNPCLHPGDIRNVKVVVNVKELSHLKNCVVFSQK 471
Query: 380 GHKPLPNLL 406
G++PLPN+L
Sbjct: 472 GNRPLPNML 480
>gb|PKY42614.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1133
Score = 158 bits (400), Expect = 6e-42
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = +2
Query: 23 GRMIYF*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIIS 202
G + F + LECKR++TLK L+ KARIL+P+SFLL+GVIDETGILEE+EIYVQTSTI+S
Sbjct: 701 GNIDPFLKAILECKRVYTLKSLKYKARILMPNSFLLLGVIDETGILEEDEIYVQTSTIVS 760
Query: 203 EYQTFDTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKV-VAVKVPELSHLKNCVVFSQK 379
E QT + K W PA+I RNPCLHPGD+R V V V V ELSHLKNCVVFSQK
Sbjct: 761 EQQT---------SKSKDWI-PAIIARNPCLHPGDIRNVKVVVNVKELSHLKNCVVFSQK 810
Query: 380 GHKPLPNLL 406
G++PLPN+L
Sbjct: 811 GNRPLPNML 819
>gb|PKK77088.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1136
Score = 158 bits (400), Expect = 6e-42
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = +2
Query: 23 GRMIYF*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIIS 202
G + F + LECKR++TLK L+ KARIL+P+SFLL+GVIDETGILEE+EIYVQTSTI+S
Sbjct: 704 GNIDPFLKAILECKRVYTLKSLKYKARILMPNSFLLLGVIDETGILEEDEIYVQTSTIVS 763
Query: 203 EYQTFDTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKV-VAVKVPELSHLKNCVVFSQK 379
E QT + K W PA+I RNPCLHPGD+R V V V V ELSHLKNCVVFSQK
Sbjct: 764 EQQT---------SKSKDWI-PAIIARNPCLHPGDIRNVKVVVNVKELSHLKNCVVFSQK 813
Query: 380 GHKPLPNLL 406
G++PLPN+L
Sbjct: 814 GNRPLPNML 822
>gb|PKC12901.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKC74937.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKY14099.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1136
Score = 158 bits (400), Expect = 6e-42
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = +2
Query: 23 GRMIYF*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIIS 202
G + F + LECKR++TLK L+ KARIL+P+SFLL+GVIDETGILEE+EIYVQTSTI+S
Sbjct: 704 GNIDPFLKAILECKRVYTLKSLKYKARILMPNSFLLLGVIDETGILEEDEIYVQTSTIVS 763
Query: 203 EYQTFDTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKV-VAVKVPELSHLKNCVVFSQK 379
E QT + K W PA+I RNPCLHPGD+R V V V V ELSHLKNCVVFSQK
Sbjct: 764 EQQT---------SKSKDWI-PAIIARNPCLHPGDIRNVKVVVNVKELSHLKNCVVFSQK 813
Query: 380 GHKPLPNLL 406
G++PLPN+L
Sbjct: 814 GNRPLPNML 822
>dbj|GBC42804.1| RNA-dependent RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 1136
Score = 158 bits (400), Expect = 6e-42
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Frame = +2
Query: 23 GRMIYF*RLFLECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIIS 202
G + F + LECKR++TLK L+ KARIL+P+SFLL+GVIDETGILEE+EIYVQTSTI+S
Sbjct: 704 GNIDPFLKAILECKRVYTLKSLKYKARILMPNSFLLLGVIDETGILEEDEIYVQTSTIVS 763
Query: 203 EYQTFDTAHEKIQREQKIWEGPAVITRNPCLHPGDLRKV-VAVKVPELSHLKNCVVFSQK 379
E QT + K W PA+I RNPCLHPGD+R V V V V ELSHLKNCVVFSQK
Sbjct: 764 EQQT---------SKSKDWI-PAIIARNPCLHPGDIRNVKVVVNVKELSHLKNCVVFSQK 813
Query: 380 GHKPLPNLL 406
G++PLPN+L
Sbjct: 814 GNRPLPNML 822
>gb|POG77563.1| RNA dependent RNA polymerase-domain-containing protein [Rhizophagus
irregularis DAOM 181602=DAOM 197198]
Length = 1123
Score = 156 bits (394), Expect = 4e-41
Identities = 75/104 (72%), Positives = 90/104 (86%)
Frame = +2
Query: 95 KARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTFDTAHEKIQREQKIWEGPAV 274
KAR +V + IGVIDE+GILEE EI++QTSTI+SE+QTFD+A+ K+QRE K+W G A+
Sbjct: 687 KAREIVKRN---IGVIDESGILEEGEIFIQTSTIVSEHQTFDSANNKVQREHKVWTGQAM 743
Query: 275 ITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLPNLL 406
ITRNPCLHPGD+RKV AV VPELSHL+NCVVFSQKG +PLPNLL
Sbjct: 744 ITRNPCLHPGDIRKVQAVDVPELSHLRNCVVFSQKGDRPLPNLL 787
>emb|CDW77053.1| rna-directed rna polymerase [Stylonychia lemnae]
Length = 1363
Score = 105 bits (261), Expect = 3e-23
Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 9/120 (7%)
Frame = +2
Query: 68 IFTLKL-----LRNKARILVPDSFLLIGVIDETGILEENEIYVQTS----TIISEYQTFD 220
++T++L L+ KARI++P+S +L+GVIDETGILEENE+Y Q ++ + +D
Sbjct: 837 LYTMQLSSYMNLKKKARIIIPNSCVLLGVIDETGILEENEVYCQIRPDNYSLKRKQALWD 896
Query: 221 TAHEKIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLPN 400
+ E K+ G ++TRNPC HPGD+R + AV PEL+HL N +VFS KG +P N
Sbjct: 897 LYSDDSVEEPKLVNGSVIVTRNPCTHPGDIRLLAAVDRPELAHLFNVIVFSSKGDRPQCN 956
>gb|AJA90770.1| RNA-dependent RNA polymerase 2 [Ephedra trifurca]
Length = 1111
Score = 103 bits (256), Expect = 1e-22
Identities = 52/116 (44%), Positives = 74/116 (63%)
Frame = +2
Query: 53 LECKRIFTLKLLRNKARILVPDSFLLIGVIDETGILEENEIYVQTSTIISEYQTFDTAHE 232
L+ R F L L++K RI VP +LIG +DETG L+ E+++Q S + +D A
Sbjct: 694 LQAFRDFHLSELKSKCRIFVPRGNVLIGCLDETGTLDYGEVFIQVSKTKIK-GNYDGASS 752
Query: 233 KIQREQKIWEGPAVITRNPCLHPGDLRKVVAVKVPELSHLKNCVVFSQKGHKPLPN 400
+ E+ + EG V+ +NPCLHPGD+RK+ AV VP L H+ +C VF QKG++P PN
Sbjct: 753 LEELERHVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPN 808