BLASTX nr result

ID: Ophiopogon27_contig00052556 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052556
         (513 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX61166.1| hypothetical protein RirG_173510 [Rhizophagus irr...    83   2e-16
dbj|GBC42646.1| putative swi5-like protein [Rhizophagus irregula...    82   5e-15

>gb|EXX61166.1| hypothetical protein RirG_173510 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX79599.1| hypothetical protein RirG_004030 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKK78535.1| Swi5-domain-containing protein [Rhizophagus irregularis]
 gb|POG62667.1| putative swi5-like protein [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 191

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
 Frame = -1

Query: 321 KWKENALSYIEQEKAMRPFSFYELNRKLEGNS---GILRELVAEGVISEKKIKVYGPLLD 151
           K KE AL YI+QE   RP SFYELN ++ GNS    IL+ELV E  I E+KI++ G  LD
Sbjct: 5   KGKEKALKYIKQEGNTRPVSFYELNSQMHGNSNIHSILQELVTEDFILEQKIEINGLSLD 64

Query: 150 SPLNTVTLYF-KVNQKEPQISTPTLK 76
            PL+TVTLYF K+   + ++S PTL+
Sbjct: 65  IPLDTVTLYFNKIKSNKDKVSAPTLR 90


>dbj|GBC42646.1| putative swi5-like protein [Rhizophagus irregularis DAOM 181602]
          Length = 380

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
 Frame = -1

Query: 315 KENALSYIEQEKAMRPFSFYELNRKLEGNS---GILRELVAEGVISEKKIKVYGPLLDSP 145
           KE AL YI+QE   RP SFYELN ++ GNS    IL+ELV E  I E+KI++ G  LD P
Sbjct: 196 KEKALKYIKQEGNTRPVSFYELNSQMHGNSNIHSILQELVTEDFILEQKIEINGLSLDIP 255

Query: 144 LNTVTLYF-KVNQKEPQISTPTLK 76
           L+TVTLYF K+   + ++S PTL+
Sbjct: 256 LDTVTLYFNKIKSNKDKVSAPTLR 279


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