BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052474
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposo...    76   3e-14
gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]    75   4e-13
gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposo...    73   1e-12
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]    74   1e-12
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    74   2e-12
gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposo...    73   2e-12
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...    71   2e-11
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    71   2e-11
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    71   2e-11
gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondr...    66   4e-11
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo...    69   5e-11
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...    69   5e-11
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]    67   2e-10
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...    67   3e-10
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]    67   4e-10
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]    67   4e-10
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...    65   7e-10
gb|PON75591.1| hypothetical protein PanWU01x14_042160 [Parasponi...    64   8e-10
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    65   2e-09
gb|KYP69065.1| Retrovirus-related Pol polyprotein from transposo...    64   4e-09

>gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 198

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIR--------E*RHGL*MKGSTKRSTGRSYHR-WMKMSETTNLCTKT 169
           EKF+GK +F +W  R        +  H L  +   ++ T       ++K S T  LC   
Sbjct: 9   EKFNGKKDFGIWQRRVKAILVQNDLYHALLGREKARKITNEECEELYLKASSTIQLCL-- 66

Query: 170 TNHIMPIR*SSLHLYNVMN-EMTVGVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPI 343
                    +   LYN+ + E +V +W KLE  YM+K+L+NK +MK  LY L + E   +
Sbjct: 67  ---------ADEVLYNIFDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYSLRMSEEADL 117

Query: 344 LQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           L+H+N F KI+S   +++VKLE E+K L
Sbjct: 118 LEHMNIFSKIISQFHSIDVKLEEEDKTL 145


>gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]
          Length = 553

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*----RHGL*--MKGSTKRSTGRSYHRWMKMSETTNLCTKTTNH 178
           EKFDGK +F +W ++      ++GL   + G + +    +  +W +M E           
Sbjct: 8   EKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEEMDEKAL-------S 60

Query: 179 IMPIR*SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMPILQH 352
           I+ +  S   L  V+NE T  G+W KLES+YMTK+L+NK  +K  L+ L + EG PI  H
Sbjct: 61  IIQLCLSREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLFTLRMSEGTPIQSH 120

Query: 353 LNTFKKIVSDLLALEVKLE*ENKAL 427
           L  F  I+ DL  L+V+++ E+KA+
Sbjct: 121 LGEFNSIIIDLENLDVEIDDEDKAV 145


>gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 249

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIR--------E*RHGL*MKGSTKRSTGRSYHRW-MKMSETTNLCTKT 169
           EKFD K +F +W +R        +  H L  + + ++ T   +    +K   T  LC   
Sbjct: 64  EKFDHKKDFGIWQLRVKAILVQNDLHHALLERKNARKMTDEEWKELDLKALSTIQLCL-- 121

Query: 170 TNHIMPIR*SSLHLYNVMN-EMTVGVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPI 343
                    +   LYN+ + E +V +W KLE  YM+K+L+NK +MK  LY L + EG  +
Sbjct: 122 ---------ADEVLYNISDVETSVDLWRKLEKFYMSKSLTNKLYMKRQLYNLRMSEGANL 172

Query: 344 LQHLNTFKKIVSDLLALEVKLE 409
           L+H+N F K++S   ++EVKL+
Sbjct: 173 LEHMNVFSKMISQFHSIEVKLQ 194


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*----RHGL*--MKGSTKRSTGRSYHRWMKMSE----TTNLCTK 166
           EKFDGK +F +W ++      ++GL   + G + +    +  +W +  E    T  LC  
Sbjct: 8   EKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPATTTEEQWEETDEKALSTIQLCL- 66

Query: 167 TTNHIMPIR*SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMP 340
                     S   L  V+NE T  G+W KLES+YMTK+L+NK  +K  L+ L + EG P
Sbjct: 67  ----------SREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLFTLRMSEGTP 116

Query: 341 ILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           I  HL  F  I+ DL  L+V+++ E+KA+
Sbjct: 117 IQSHLGEFNSIIIDLENLDVEIDDEDKAV 145


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*----RHGL*--MKGSTKRSTGRSYHRWMKMSETT----NLCTK 166
           EKFDGK  F +W ++      ++GL   + G  K+    +  +W ++ E       LC  
Sbjct: 10  EKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCL- 68

Query: 167 TTNHIMPIR*SSLHLYNVMNEMTVG-VWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMP 340
                     S   L  V NE T   +W KLES+YMTK+L+NK  +K  LY + + EG P
Sbjct: 69  ----------SKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTP 118

Query: 341 ILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           I  HLN F  I+ DL  +E+K++ E+KA+
Sbjct: 119 IQSHLNEFNSIIMDLENIEIKIDDEDKAV 147


>gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMSETTNLCTKTTN------- 175
           EKF+GK++F LW I+   H L  +   +R  G      +K    T L  K+T+       
Sbjct: 8   EKFNGKNSFNLWRIK--MHALLKE---QRVWGPLATTSVKKESKTELSNKSTSIKKEDLA 62

Query: 176 -------HIMPIR*SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIK 328
                   ++ +  S+  LY V ++ T  G+W KLE +YMTK++ NK  +K  L+GL +K
Sbjct: 63  EQEEKAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMK 122

Query: 329 EGMPILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           E  P+ +HL+ F  I+ +L  ++VK+E E+ A+
Sbjct: 123 ESTPLKEHLDEFNSILMELRDIDVKIEDEDSAM 155


>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
 Frame = +2

Query: 5   RQSFEKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMSETTNLCTKTTNHIM 184
           +   EKF+G+++F LW ++  R  L  +G  K   G+ +          +   K  + ++
Sbjct: 129 KYEIEKFNGRNDFSLWRVKM-RALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVI 187

Query: 185 PIR*SSLHLYNVMNEMTVG-VWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMPILQHLN 358
            +  S   L  V +E +   VW KLESIYMTK+L+N+ +MK  LY L + EG  +  H++
Sbjct: 188 LLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHID 247

Query: 359 TFKKIVSDLLALEVKLE*ENKAL 427
            F +++ DL  ++VK+E E+ AL
Sbjct: 248 EFNRVILDLKNIDVKIEDEDLAL 270


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMSETTNLCTKTTNHIMPIR* 196
           EKF GK++F LW I+  R  L  +G  K  +G+         E  +   +  +  + +  
Sbjct: 533 EKFTGKNSFSLWRIKM-RAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAHSAILLCL 591

Query: 197 SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKK 370
               L  V +E T  G+W +LES YMTK+L+N+ ++K  LY L ++EG P+ QHL+ F  
Sbjct: 592 GDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHLDKFNS 651

Query: 371 IVSDLLALEVKLE*ENKAL 427
           I+ DL  ++ K++ E++A+
Sbjct: 652 IIMDLNNIDNKIDDEDQAI 670


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMSETTNLCTKTTNHIMPIR* 196
           EKF GK++F LW I+  R  L  +G  K  +G+         E  +   +  +  + +  
Sbjct: 512 EKFTGKNSFSLWRIKM-RAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAHSAILLCL 570

Query: 197 SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKK 370
               L  V +E T  G+W +LES YMTK+L+N+ ++K  LY L ++EG P+ QHL+ F  
Sbjct: 571 GDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQHLDKFNS 630

Query: 371 IVSDLLALEVKLE*ENKAL 427
           I+ DL  ++ K++ E++A+
Sbjct: 631 IIMDLNNIDNKIDDEDQAI 649


>gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
           glauca]
          Length = 116

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +2

Query: 209 LYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKKIVSD 382
           ++NV  E T  G+W KLES+Y +K+L N+  +K  LY L +KEG  + +HLNTF  I+S 
Sbjct: 26  IFNVRGEKTASGLWAKLESLYQSKSLLNRILLKNRLYSLKMKEGAKVSEHLNTFNDILSQ 85

Query: 383 LLALEVKLE*ENKAL 427
           L ++ VK++ E+KA+
Sbjct: 86  LESIGVKMDDEDKAV 100


>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score = 69.3 bits (168), Expect = 5e-11
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIR------E*RHGL*MKGSTKR----STGRSYHRWMKMSETTNLCTK 166
           EKF+GK++F LW I+      E R    +  ++ +    S  +      K+ E      K
Sbjct: 10  EKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQEEK 69

Query: 167 TTNHIMPIR*SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMP 340
             + I+ +  S   LY V +E T  G+WCKLE +YMTK++ NK  +K  L+GL +KEG P
Sbjct: 70  AHSLIL-LSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTP 128

Query: 341 ILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           +  HL+    ++ +L  ++VK+E E+ A+
Sbjct: 129 LKDHLDELNSVLMELRDIDVKIEDEDAAM 157


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score = 69.3 bits (168), Expect = 5e-11
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
 Frame = +2

Query: 17  EKFDGKSNFLLWNIR------E*RHGL*MKGSTKR----STGRSYHRWMKMSETTNLCTK 166
           EKF+GK++F LW I+      E R    +  ++ +    S  +      K+ E      K
Sbjct: 10  EKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQEEK 69

Query: 167 TTNHIMPIR*SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMP 340
             + I+ +  S   LY V +E T  G+WCKLE +YMTK++ NK  +K  L+GL +KEG P
Sbjct: 70  AHSLIL-LSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGTP 128

Query: 341 ILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
           +  HL+    ++ +L  ++VK+E E+ A+
Sbjct: 129 LKDHLDELNSVLMELRDIDVKIEDEDAAM 157


>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = +2

Query: 5   RQSFEKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSY-HRWMKMSETTNLCTKTTNHI 181
           +   EKF+G+++F LW ++     L  +G  K   G+ +    +  SE  +L  K  + I
Sbjct: 7   KYEIEKFNGRNDFSLWRVKMCAL-LVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAI 65

Query: 182 MPIR*SSLHLYNVMNEMTVGVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMPILQHLN 358
           +      +       E    +W KLESIY+TK+L+N+ +MK  LY L + EG  +  H++
Sbjct: 66  LLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHID 125

Query: 359 TFKKIVSDLLALEVKLE*ENKAL 427
            F +++ DL  ++VK+E E+ AL
Sbjct: 126 EFNRVILDLKNIDVKIEDEDLAL 148


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
 Frame = +2

Query: 20  KFDGKSNFLLWNIRE*RHGL*MKGSTKR-----STGRSYHRW--MKMSETTNLCTKTTNH 178
           KFDG  NF+LW +R  +  L  +G +K             +W  MK      +    ++ 
Sbjct: 13  KFDGTGNFVLWQMRL-KDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRLSLSDS 71

Query: 179 IMPIR*SSLHLYNVMNEMTVG-VWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQH 352
           +M         Y VM+E T   +W KL S+YM+K+L++K ++K  LYGL ++E   + +H
Sbjct: 72  VM---------YQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKH 122

Query: 353 LNTFKKIVSDLLALEVKLE*ENKAL 427
           ++ F ++V DL  L+VKL+ E+KA+
Sbjct: 123 VDVFNQLVVDLSKLDVKLDDEDKAI 147


>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
 Frame = +2

Query: 5   RQSFEKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMS--ETTNLCTKTTNH 178
           +   EKF+G+++F LW ++     L ++    ++     H    +S  E  NL  K  + 
Sbjct: 7   KYEIEKFNGRNDFSLWCVK--MCALLVQQGLLKALKEKEHLLSNLSNGEKDNLMEKAHSA 64

Query: 179 IMPIR*SSLHLYNVMNEMTVGVWCKLESIYMTKNLSNKFFMK-*LYGLGIKEGMPILQHL 355
           I+      +       E  + VW KL+SIYMTK+L N+ ++K  LY L + EG  +  H+
Sbjct: 65  ILLALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVNTHI 124

Query: 356 NTFKKIVSDLLALEVKLE*ENKAL 427
           + F +++ DL  ++VK+E E+ AL
Sbjct: 125 DEFNRVILDLKNIDVKIEDEDLAL 148


>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
          Length = 815

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 34/75 (45%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = +2

Query: 209 LYNVMNEMTVGV-WCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKKIVSD 382
           +Y+VM+E +  + W KLES YM+K+L+NK ++K  LYGL + +G  + QH+N F +I+SD
Sbjct: 1   MYHVMDEESPTIIWLKLESRYMSKSLTNKLYLKQKLYGLKMAKGSDLSQHINVFNQIISD 60

Query: 383 LLALEVKLE*ENKAL 427
           L  ++V+ + E+KAL
Sbjct: 61  LKRIDVRFDDEDKAL 75


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 65.5 bits (158), Expect = 7e-10
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +2

Query: 209 LYNVMNEMTVG-VWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKKIVSD 382
           L  V NE T   +W KLES+YMTK+L+NK  +K  LY + + EG PI  HLN F  I+ D
Sbjct: 49  LREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMD 108

Query: 383 LLALEVKLE*ENKAL 427
           L  +E+K++ E+KA+
Sbjct: 109 LENIEIKIDDEDKAV 123


>gb|PON75591.1| hypothetical protein PanWU01x14_042160 [Parasponia andersonii]
          Length = 161

 Score = 63.5 bits (153), Expect = 8e-10
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
 Frame = +2

Query: 5   RQSFEKFDGKSNFLLWNIRE*RHGL*MKGSTKRSTGRSYHRWMKMSETTNLCTKTTNHIM 184
           R   EKF G  NF LW I+  ++ L   G  K   GR  ++  + S+ +++  +  + + 
Sbjct: 11  RADVEKFGGNINFGLWQIQV-KNLLIQSGLHKILKGREAYK-RRDSQKSSMSDEDLDDLD 68

Query: 185 PIR*SSLH-------LYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGM 337
               S ++       L NV+ +MT    W KLE +Y  K +SN+ ++K   + L + EG 
Sbjct: 69  ERAASMIYMCLAKIVLANVLGKMTAKDFWRKLEELYQAKGVSNRVYLKEQFHTLRMNEGT 128

Query: 338 PILQHLNTFKKIVSDLLALEVKLE*ENKAL 427
            I  HLN    IVS+L A+ VK+E E+KAL
Sbjct: 129 KISDHLNVLNGIVSELEAIGVKIEDEDKAL 158


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
 Frame = +2

Query: 20  KFDGKSNFLLWNIRE*RHGL*MKGSTK-RSTGRSYHRWMKMSETTNLCTKTTNHIMPIR* 196
           KF+G + F  W  R  R  L  +G  K           MK  +  +L  +  + I  +  
Sbjct: 10  KFNGDNGFSTWQ-RRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR-LHL 67

Query: 197 SSLHLYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKK 370
           S   + N+++E T  G+W +LES+YM+K L+NK ++K  LY L + EG   L HLN F  
Sbjct: 68  SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127

Query: 371 IVSDLLALEVKLE*ENKAL 427
           +++ L  L VK+E E+KA+
Sbjct: 128 LITQLANLGVKIEEEDKAI 146


>gb|KYP69065.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 285

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +2

Query: 209 LYNVMNEMTV-GVWCKLESIYMTKNLSNKFFMK*-LYGLGIKEGMPILQHLNTFKKIVSD 382
           LY V ++ T  G+W KLE +YMTK++ NK  +K  L+GL +KE  P+ +HL+ F  I+ +
Sbjct: 59  LYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKESTPLKEHLDEFNSILME 118

Query: 383 LLALEVKLE*ENKAL 427
           L  ++VK+E E+ A+
Sbjct: 119 LRDIDVKIEDEDSAM 133