BLASTX nr result

ID: Ophiopogon27_contig00052425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052425
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX65824.1| hypothetical protein RirG_129580 [Rhizophagus irr...   135   1e-37

>gb|EXX65824.1| hypothetical protein RirG_129580 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC51165.1| hypothetical protein RIR_3272800 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC17695.1| hypothetical protein RhiirA5_345879 [Rhizophagus irregularis]
 gb|PKC62454.1| hypothetical protein RhiirA1_423825 [Rhizophagus irregularis]
 gb|PKY24100.1| hypothetical protein RhiirB3_412656 [Rhizophagus irregularis]
 gb|PKY50186.1| hypothetical protein RhiirA4_406230 [Rhizophagus irregularis]
 gb|POG64142.1| hypothetical protein GLOIN_2v1678104 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 176

 Score =  135 bits (340), Expect = 1e-37
 Identities = 80/138 (57%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
 Frame = -1

Query: 421 LQKIESQEHLGLTNKNNAK-------QAYQEPTSKSFEKLGSIQSIFRDKFSISPAIXXX 263
           LQKIESQE LGLTNKN+ +       Q  Q P+S  FEK GSIQSIFRDKFSISP+    
Sbjct: 22  LQKIESQECLGLTNKNSVENTIQKNAQTKQTPSSNYFEKFGSIQSIFRDKFSISPSTTPH 81

Query: 262 XXXXXXXXXXXXSFDVQQGSNNLSFFDQINSSSQIPTTASTAFRTAYYHHDPKIFQNVKE 83
                       SFDVQQ  +NL   DQ N   Q   T+S   RTA YHHD K+FQNVK 
Sbjct: 82  STPPTSRPSTPLSFDVQQSGDNLLLSDQAN---QTIMTSSPLARTACYHHDSKVFQNVKS 138

Query: 82  VLPCVGNIESDIINRPSS 29
           VLPCV +IESDIINRPSS
Sbjct: 139 VLPCVEDIESDIINRPSS 156


Top