BLASTX nr result

ID: Ophiopogon27_contig00052234 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052234
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC00716.1| hypothetical protein RhiirA5_458344 [Rhizophagus ...    67   9e-10
gb|EXX57826.1| hypothetical protein RirG_203500 [Rhizophagus irr...    67   9e-10

>gb|PKC00716.1| hypothetical protein RhiirA5_458344 [Rhizophagus irregularis]
 gb|PKC63735.1| hypothetical protein RhiirA1_366930 [Rhizophagus irregularis]
 gb|PKY21479.1| hypothetical protein RhiirB3_470349 [Rhizophagus irregularis]
          Length = 740

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 49/145 (33%), Positives = 51/145 (35%), Gaps = 3/145 (2%)
 Frame = +2

Query: 2    NNLTPSFTQHFTXXXXXXXXXXXXXXXXXXNMKXXXXXXXXXXXXXXXXXXXXXXXXXEG 181
            NNLTPSFTQHFT                  NM+                         EG
Sbjct: 596  NNLTPSFTQHFTSSPRPGPLQLPPKSPLSSNMRTNSLPIMSSNSSTSSSNSTTFLNNNEG 655

Query: 182  VXXXXXXXXXXXXXXXXXXXXXITSLTNRIDFIMNKKKDNYYNDSVP---XXXXXXXXXX 352
            V                     ITSLT+RIDFIMNK KDNYYNDSVP             
Sbjct: 656  VLTSSPLLLPTTNTDNLPKLPPITSLTSRIDFIMNKTKDNYYNDSVPQQQGQQYYHQSYS 715

Query: 353  XXXXXXXXXXXXXXXXGGSSIDNGY 427
                            GGSSIDNGY
Sbjct: 716  MDDNNLNYNNNVWHNNGGSSIDNGY 740


>gb|EXX57826.1| hypothetical protein RirG_203500 [Rhizophagus irregularis DAOM
            197198w]
 dbj|GBC25121.1| nuclear division rft1 protein [Rhizophagus irregularis DAOM 181602]
 gb|POG75977.1| velvet factor-domain-containing protein [Rhizophagus irregularis DAOM
            181602=DAOM 197198]
          Length = 740

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 49/145 (33%), Positives = 51/145 (35%), Gaps = 3/145 (2%)
 Frame = +2

Query: 2    NNLTPSFTQHFTXXXXXXXXXXXXXXXXXXNMKXXXXXXXXXXXXXXXXXXXXXXXXXEG 181
            NNLTPSFTQHFT                  NM+                         EG
Sbjct: 596  NNLTPSFTQHFTSSPRPGPLQLPPKSPLSSNMRTNSLPIMSSNSSTSSSNSTTFLNNNEG 655

Query: 182  VXXXXXXXXXXXXXXXXXXXXXITSLTNRIDFIMNKKKDNYYNDSVP---XXXXXXXXXX 352
            V                     ITSLT+RIDFIMNK KDNYYNDSVP             
Sbjct: 656  VLTSSPLLLPTTNTDNLPKLPPITSLTSRIDFIMNKTKDNYYNDSVPQQQGQQYYHQSYS 715

Query: 353  XXXXXXXXXXXXXXXXGGSSIDNGY 427
                            GGSSIDNGY
Sbjct: 716  MDDNNLNYNNNVWHNNGGSSIDNGY 740


Top